Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0274 ATGCCAAAGTCCAAACGCAATAAAACAGTCACACTCTCGAAGACAAAGAAAAAGGGGAGGGAACATAAAGAAGCAATAGTAAATGCTATAAAAGATGCTGCTGAAAAATACAGTTCAGTGTATGTGTTCTCTTTTGAAAACATGAGAAATAAGAAATTCAAGGAGTTCAGGGAGCAACTGAAATCTAATAGCAGGTTTTTCTTGGGATCAAACAAAGTCATGCAGGTCGCCCTAGGCCATTCTGCTGCTGATGAGATTAGACCCGGTCTTCATAAGGTTTCTAAGCTTCTACGAGGAGATGCTGGAATGGTTTTTACAAATTTGGCAAAAGAAGAAGTTGAAAGGTTATTTAATGAGTTTGAGGAGTATGACTTTGCGAGAACAGGAAGCAATGCAACTGAAAAGGTGGAACTCAAAGAAGGTCCTTTGGAGCAGTTCACACATGAGATGGAGCCATTTCTACGGAAGCAAGGCATGCCTGTCCGGTTAAATAAAGGAGTGGTTGAACTTGTCTCAGATTTTGTTGTTTGTGAGGAGGGGAAGCCGTTGTCACCTGAGGCATCTCGCATACTGCGTCTACTGGGGATTCAGATGGCTACATTTAAACTTCATCTGATATGCGGATGGAGTCCTGACGATTTTGAACTGTACATACAAGGACCAGATGATTCAGATGCCGAAACCAGTTAA 690 0.4174 MPKSKRNKTVTLSKTKKKGREHKEAIVNAIKDAAEKYSSVYVFSFENMRNKKFKEFREQLKSNSRFFLGSNKVMQVALGHSAADEIRPGLHKVSKLLRGDAGMVFTNLAKEEVERLFNEFEEYDFARTGSNATEKVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLLGIQMATFKLHLICGWSPDDFELYIQGPDDSDAETS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0274 229 Pfam Ribosomal protein L10 19 120 IPR001790 -
Lele34g0274 229 Gene3D - 125 198 IPR043164 -
Lele34g0274 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 220 - -
Lele34g0274 229 FunFam Ribosome assembly factor mrt4 29 128 - -
Lele34g0274 229 Gene3D - 30 211 IPR043141 -
Lele34g0274 229 FunFam Ribosome assembly factor mrt4 125 198 - -
Lele34g0274 229 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
Lele34g0274 229 SUPERFAMILY Ribosomal protein L10-like 20 144 IPR043141 -
Lele34g0274 229 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0274 Lele-ChrLele34 2262653 2265774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0274 35 203 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 21.387 7.31e-10 56.2