LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele34g0255	ATGAAGATTTTTGTGGTGCTACTCTTTCTCTTCTTCTCCGTGTTTGTTACTCTCAGCTCTGCAGATTCTTCGTCTTCTTCTCCCTCTGTTAACAATTCCACGTGCCCCATGGATCTGAACTATGTGCTGAGAATTCCGTGGAACTCTTCCATGTGCCAAAACTTCCACACTTTGGATTCCGTCGGCGACACTCGAAGAAGCCATTGTTGCCAAACTTTACTTTCCCTAATTGGCGTAGGGCTTGCTCAACACCTTAAAGAAACCTCCATGTTCCACCTACCAGATCTTCGTACCTCCAATTCTTGCCTCCACGATTTTCAATCCAAGCTCTCTTCCCTCTCTCTCTCTGATTACCTCACCTCTGCTTGCTTCGACCCGATTCAATTTGTTGTTAGCCGTAACTTCTGCGCGGAAATCCAAACGATTCCTGATTGGATCGGGAAGCTCGGAGAAACGACGCCGCTTAACCGGGGATGCAAACCGGACCTTACTGATCTTACTCTCTGTGGTGCGTGTGTGGCGGCGGGGTTTCAGGTCCAGCAGCAACTCACACAAATTGACGGTGACTCTTCCCACGCCACAAATTGCTTTCACTTTGCTATTTTGTATGCTGCTGGTATGGTGAATGAGTTTGGGCCGGAGAGTAATGGTGCTGTGACATGCATTTTTGGCATGTCGGTTTATCCAACTTCGGATTCTGGACGAAATGGTCGCCATCAAGCTCTTGTATTTGGTTTAACCGGAGCTTCGGTTGGTTTGTTTGTCATGTTCGCTTTGTTGGGTCTGTATCTATGGTATGATAGGAAGTGGAGGAGAAAACTTGAGAGTTTTGCGTTTGATATTGACCCTGAAGAGCAAGGATCCAGGCCTAGATTGAGGCCAAATACTGGATCAATCTGGTTTAAGATTGAGGAGCTTCAGAAGGCTACTAATAGTTTTTCATCCAAGAACTTCATAGGAAGGGGTGGATTTGGGATGGTTTACAAGGGAACTTTGGCCGATGGATCAGTAGTCGCAGTTAAAAGGATTCTGGAATCTGATTATCAAGGGGACGCCGAGTTCTGCAATGAAGTTGAGATCATTAGTAATCTGAAGCACCGTAATCTGGTACCGCTTAGAGGGTGCTGTGTGGTGGACGAGGGTGAGAGTTATGAGGAAAGAGGTCAAAGATATCTGGTTTATGACTACATGCCAAATGGTAACCTTGAAAACCATCTCTTCTCATCATCATCAGTGGGCAATCAGAATGAAAAGAGATCATTGACTTGGCCACAGAGAAAAAGCATAATCTTGGATGTGGCAAATGGGTTAGCTTACTTGCATTATGGAGTTAAGCCTTCAATTTATCACAGAGACATCAAGGCCACCAATATACTACTTGATGCCGATATGAGAGCAAGAGTTGCAGATTTTGGGCTTGCTAAGCAGAGCAGGGAAGGTCAGTCTCATCTCACTACTAGAGTTGCTGGAACTCATGGATATCTAGCCCCAGAATATGCATTATATGGTCAGCTTACTGAGAAGAGTGATGTATATAGCTTCGGTGTGGTTGTTTTGGAGATAATGTGTGGGAGAAAAGCTCTTGATTTGTCTTCATCAGGATCTCCAAGGGCATTTTTGATCACAGATTGGGCATGGTCCTTGGTTAAATCTGGGAACATAGACGAGGCATTAGACGCTTCCCTTGTAAAAGATGGCGATTGTCCTAGTTCAAATCCTAAGAGCATAATGGAAAGGTTTTTACTTGTGGGGATTCTATGTTCTCATGTGATGGTTGCTTTGAGGCCAACGATTTCTGAAGCTTTGAAGATGTTGGAAGGTGATGTCGAAGTTCCAGAAATCCCCGACCGGCCCATGCCTCTCGGGCATCCTTCATTTTACAATGATGGTAACAATACTTTTAGCATATCTCCAGCATTAAGCGGCCCAAAATTGCATACTGGAGACATGCTCAGGTAA	1959	0.4492	MKIFVVLLFLFFSVFVTLSSADSSSSSPSVNNSTCPMDLNYVLRIPWNSSMCQNFHTLDSVGDTRRSHCCQTLLSLIGVGLAQHLKETSMFHLPDLRTSNSCLHDFQSKLSSLSLSDYLTSACFDPIQFVVSRNFCAEIQTIPDWIGKLGETTPLNRGCKPDLTDLTLCGACVAAGFQVQQQLTQIDGDSSHATNCFHFAILYAAGMVNEFGPESNGAVTCIFGMSVYPTSDSGRNGRHQALVFGLTGASVGLFVMFALLGLYLWYDRKWRRKLESFAFDIDPEEQGSRPRLRPNTGSIWFKIEELQKATNSFSSKNFIGRGGFGMVYKGTLADGSVVAVKRILESDYQGDAEFCNEVEIISNLKHRNLVPLRGCCVVDEGESYEERGQRYLVYDYMPNGNLENHLFSSSSVGNQNEKRSLTWPQRKSIILDVANGLAYLHYGVKPSIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSSGSPRAFLITDWAWSLVKSGNIDEALDASLVKDGDCPSSNPKSIMERFLLVGILCSHVMVALRPTISEALKMLEGDVEVPEIPDRPMPLGHPSFYNDGNNTFSISPALSGPKLHTGDMLR	652

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele34g0255	652	SUPERFAMILY	Protein kinase-like (PK-like)	292	606	IPR011009	-
	Lele34g0255	652	Pfam	SPARK	31	197	IPR043891	-
	Lele34g0255	652	ProSiteProfiles	Protein kinase domain profile.	313	626	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele34g0255	652	ProSitePatterns	Protein kinases ATP-binding region signature.	319	341	IPR017441	GO:0005524
	Lele34g0255	652	Gene3D	Phosphorylase Kinase; domain 1	284	396	-	-
	Lele34g0255	652	PANTHER	OS01G0750732 PROTEIN	51	613	-	-
	Lele34g0255	652	SMART	serkin_6	313	605	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele34g0255	652	FunFam	probable receptor-like protein kinase At1g11050	276	396	-	-
	Lele34g0255	652	CDD	STKc_IRAK	319	607	-	-
	Lele34g0255	652	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	448	460	IPR008271	GO:0004672\|GO:0006468
	Lele34g0255	652	FunFam	probable LRR receptor-like serine/threonine-protein kinase RKF3	397	613	-	-
	Lele34g0255	652	Gene3D	Transferase(Phosphotransferase) domain 1	397	613	-	-
	Lele34g0255	652	Pfam	Protein kinase domain	315	531	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele34g0255	Lele-ChrLele34	2115154	2117112	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele34g0255	25	652	Receptor kinase-like Gene Family	AT1G11050	64.650	0.0	803

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RKF3	Lele34g0255		Pkinase	6.9e-43	CL0016