Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0254 ATGAATGTGCAGGTTACAAAAATGAAGGCAGAGTATATACCACCAAAAGAAGAAGTTATCATGAAAGGTGAAGCAGCAGAGGATGTTTACATAATAGTGTCTGGAGAAGTAGAGATCATTGATTGTGTAATGGGCAAAGAGAAAGTTTTAGGGATTTTACAAAGATGGGACATGTTTGGAGAAGTTGGTGCACTTTGTTGTAAGCCTCACAGCTTTGCTTACAGAACCAAGACTCTCACACAGCTCTTGAGGCTCAAAACAAGTGATTTTACTGAGACTATGCAGACTAAAAAGGAAGACAACAGACAAATGCTAGAAAATTTCCTTCAGCACTTGAAGAAGCTACATGATGTAAATGCAAGAGAATTGGTGATTGATTGGAGTAAAGATGACCCGAATATGGCAGTGAACTTGTTACATGTGGCCTCAATTGGCAATGCTGCTTTTCTTGAAGAGCTTTTGAAGGCTGGCTTGGATTCTAGTGTTGCTGACTCCAAAGGCAAAACCCCATTGGTATATATGTTCATATTTGATATTCACAACCTTACACACATATATACAAATTCATGCAATTCAAATTTGATCTTGCAGCTTAACATGAATGGCGACACTGCCCTATGGGATGCCATAGCTTCAAAGCATTTCTCAATATTCAGAATCCTGTATCAGCTTTGTGCACTCTCTGATCCACACACAGCAGGAGATCTTTTTTGTAAAGCAGCAAAGTGGAATGAGCTAACAGTGATGAGTGAGCTTATAAAGCAAGGGTTGAACATAGAGTCCAAAGATCACCATGGTTTAACGCCAATGCAAGTTGCCTTGCAAGAGAATCATGTGGACATGATTCAATTGCTTTTCATGAACGGTTCAGATGTTGCTGCTGCTCTTAATAACCATGAAGGAGAGCAACAGCAGAACATTTGGGGAAGATATAATAATAATAATTGGCAATTTCCTTCAAGAGTTAGCATATTTAGAGGTCATCCTATATTGAGAAGACAACAAGGTTGTATTGAAACTGGCAAGATGATAAGGTTCCCTAACTCAATAGAGGAGCTCAAGAGAATTGCAGCTTAG 1077 0.3909 MNVQVTKMKAEYIPPKEEVIMKGEAAEDVYIIVSGEVEIIDCVMGKEKVLGILQRWDMFGEVGALCCKPHSFAYRTKTLTQLLRLKTSDFTETMQTKKEDNRQMLENFLQHLKKLHDVNARELVIDWSKDDPNMAVNLLHVASIGNAAFLEELLKAGLDSSVADSKGKTPLVYMFIFDIHNLTHIYTNSCNSNLILQLNMNGDTALWDAIASKHFSIFRILYQLCALSDPHTAGDLFCKAAKWNELTVMSELIKQGLNIESKDHHGLTPMQVALQENHVDMIQLLFMNGSDVAAALNNHEGEQQQNIWGRYNNNNWQFPSRVSIFRGHPILRRQQGCIETGKMIRFPNSIEELKRIAA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0254 358 Pfam Cyclic nucleotide-binding domain 12 96 IPR000595 -
Lele34g0254 358 FunFam Potassium channel KAT2 1 116 - -
Lele34g0254 358 SUPERFAMILY cAMP-binding domain-like 6 117 IPR018490 -
Lele34g0254 358 SMART cnmp_10 5 109 IPR000595 -
Lele34g0254 358 PANTHER POTASSIUM CHANNEL AKT1 5 306 IPR045319 GO:0005249|GO:0006813
Lele34g0254 358 Gene3D - 228 329 IPR036770 -
Lele34g0254 358 ProSiteProfiles Ankyrin repeat region circular profile. 265 292 - -
Lele34g0254 358 SMART ANK_2a 134 162 IPR002110 GO:0005515
Lele34g0254 358 SMART ANK_2a 265 294 IPR002110 GO:0005515
Lele34g0254 358 SMART ANK_2a 201 232 IPR002110 GO:0005515
Lele34g0254 358 ProSiteProfiles Ankyrin repeat profile. 265 297 IPR002110 GO:0005515
Lele34g0254 358 ProSiteProfiles cAMP/cGMP binding motif profile. 1 111 IPR000595 -
Lele34g0254 358 Gene3D Jelly Rolls 3 121 IPR014710 -
Lele34g0254 358 CDD CAP_ED 5 105 IPR000595 -
Lele34g0254 358 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 19 35 IPR018488 -
Lele34g0254 358 Gene3D - 134 225 IPR036770 -
Lele34g0254 358 SUPERFAMILY Ankyrin repeat 135 294 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0254 Lele-ChrLele34 2101229 2104222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0254 5 172 Ion Channels AT4G22200 59.538 1.84e-61 205