Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0242 ATGGATCATAAAGGTGACCTTCCCCAGAAGCCTCCAAAACCAATCAAGGGAATGAAAAGCATAGAAGAATCAGTTTTCTTGCATGGGGACTTGGATCTACATATCCTAGAAGCAAAACATCTTCCAAATATGGATTTTCATACTGAAACCGTGAGAAAATGTTTCACTGCAGGAAACAATTGCGCACCTCCCTTTGTTAAAGGACTCAAGACACATTCTGGAAAACATAAAATGATCACAAGTGATCCTTATGTCTCTGTCTCTCTAGCAGGGGCTACTGTAGTTCAAACTAGAGTCATATCTAATTCTGAGAACCCTGTGTGGGATGAACGTTTTGTTGTTCCTGTTGCTCACCCTGTTCAAAAAGTCGTGTTTCTTGTGAAGGACGACGACGTATTTGGAGCTGAACTCATTGGAGTCGTGGAGATATCTGTTCAGAAGATTTTGCAGGGAAATACTGTTAATGATTGGTTCCCCATCATCAACAATGGGAACTGCTTAAAACCTTATCCTGAGCTGCATATTTCTTTGAAGTTTGTGGCTGTCGGAGACAACAACCGGACAAGTTATTTTGGTGTACCTAATACATATTTTCCTCTCCGAAAAGGTGGTAATGTGACCCTTTATCAAGATGCACACGTACCAAATGGTATGCTACCTGAAATTCTACTTGACGGTGGAAAAATCTTTAACCACGGTAGATGTTGGGAGGATATATGCCATGCCATTGTGGAAGCTCACCATTTTATATATATCATAGGGTGGTCTATTTACCACCCTATAAAGCTTGTCAGAGAACCAACAAAACCAATACCTTCTGGTGGAGAGCTTTCACTTGGAGAATTGTTGAAATACAGATCACAAGAAGGAGTCCGCGTGGTTATCTTGATTTGGGACGACAGAACATCACATGACACCTTTTTTTTGAAAACGGAAGGTGTCATGCAGACACATGATGAAGCAACAAAAAAATTCTTTAAACACTCCACTGTCCATTGTGTGCTATGTCCACGTTATCCAAGCAATAAGCTCAGTATTTTCAAGCAGCATGTTGTGGGAACTCTTTTTACACATCATCAGAAGTGCGTGATTCTTGACACTAAAGCTTCTGGGAATAATAGGAAAATATCTGCTTTTATTGGTGGCCTAGATCTATGTGATGGCAGATATGATACCCCTGAGCATCGGCTCTTCACTGATCTTGATACTGTCTTCAGAAATGATTTCCATAATCCTTTACTTCCTTCCACTCATACTAGTGGACCAAGAGAGCCATGGCATGACTTGCATTGCAAAGTTGAGGGCCCAGCTGCATATGATATATTAACTAATTTTGAGCAAAGATGGAAGAAAGCCAGAAAATGGCGTAACTTAAGGCTAAACAAGGTTACAAGTTGGCATGAGGATGCTTTGCTAAGGCTAGATCGAATATCATGGATTGTCAAACCATCATCTATTGGTCTTGATGATGATGACACAAGTGTCTATGTAACTGAAGAAAACGATCCTGAGACTTGGAATGTGCAGGTATTTCGGTCCATAGATTCAGGATCTGTCAAGGGTTTTCCAAAGGATTGTATGGAAGCTAAGGCTCAGAATCTTATCTGTGGAAAAAATTTGAAAGTTGACAAAAGTATTCATGCTGCTTATGTATATGCAATAAGATCAGCTCAACGCTTCATATATATAGAGAATCAATATTTTCTTGGATCCTCATTTCATTGGCCTTCCTACAAAACTGCAGGTGCACATAACTTGGTTCCTATGGAGTTGGCTTTGAAAATTGCCAGCAAGATCAATGCCAAAGAACGTTTTGCTGTGTATATAGTAATCCCCATGTGGCCAGAAGGGGTTCCATCTAGTGCCGCTGTACAAGAAATCTTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAGGATTGTTGCAGATGCCCTTAAAAAGGCAGGTCTCGCTGACCGTTTTCACCCACAAGATTATCTCAACTTTTATTGCCTTGGAAAGCGTGAGCCTCAAATTTCTCAAAGTCCGTCACCTGCATTTCTTTCTGCTGAAAGCCGTACTCTGGCATCGGTGAAAAAAAACAGACGGTTTATGATATATGTTCACGCCAAAGGAATGATAGTTGATGATGAGTACGTCCTCATTGGATCTGCAAATATTAACGAGAGATCTTTGGATGGTTCAAGGGATACTGAAATCGCAATGGGTGCTTATCAACCAAAGTACACCAAGAAAGCCAAGAAGTCTCGTCCACATGGCCAGGTGTATGGTTACCGGATGTCGCTGTGGGCAGAGCATCTGGGTAGTGTTGAAGATACCCTTGATGAACCAGAGAGCCTGCAATGTGTGAGATATGTCAACAATGTCGCCAAACACAACTGGGCTGCTTATGTATCTGACGATGCAGGGATCATGTGGGGACACTTGATGCAGTATCCTGTTCATATCAGTGCAGATGGAACAACCAGTTCACTTCCAGGTCATGACACCTTTCCTGATGTTGGTGGTAAAATTCTTGGATCCCCCAACTCTCTCCCCGATGCACTAACCACATGA 2559 0.4174 MDHKGDLPQKPPKPIKGMKSIEESVFLHGDLDLHILEAKHLPNMDFHTETVRKCFTAGNNCAPPFVKGLKTHSGKHKMITSDPYVSVSLAGATVVQTRVISNSENPVWDERFVVPVAHPVQKVVFLVKDDDVFGAELIGVVEISVQKILQGNTVNDWFPIINNGNCLKPYPELHISLKFVAVGDNNRTSYFGVPNTYFPLRKGGNVTLYQDAHVPNGMLPEILLDGGKIFNHGRCWEDICHAIVEAHHFIYIIGWSIYHPIKLVREPTKPIPSGGELSLGELLKYRSQEGVRVVILIWDDRTSHDTFFLKTEGVMQTHDEATKKFFKHSTVHCVLCPRYPSNKLSIFKQHVVGTLFTHHQKCVILDTKASGNNRKISAFIGGLDLCDGRYDTPEHRLFTDLDTVFRNDFHNPLLPSTHTSGPREPWHDLHCKVEGPAAYDILTNFEQRWKKARKWRNLRLNKVTSWHEDALLRLDRISWIVKPSSIGLDDDDTSVYVTEENDPETWNVQVFRSIDSGSVKGFPKDCMEAKAQNLICGKNLKVDKSIHAAYVYAIRSAQRFIYIENQYFLGSSFHWPSYKTAGAHNLVPMELALKIASKINAKERFAVYIVIPMWPEGVPSSAAVQEILFWQGQTMSMMYRIVADALKKAGLADRFHPQDYLNFYCLGKREPQISQSPSPAFLSAESRTLASVKKNRRFMIYVHAKGMIVDDEYVLIGSANINERSLDGSRDTEIAMGAYQPKYTKKAKKSRPHGQVYGYRMSLWAEHLGSVEDTLDEPESLQCVRYVNNVAKHNWAAYVSDDAGIMWGHLMQYPVHISADGTTSSLPGHDTFPDVGGKILGSPNSLPDALTT 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0242 852 PANTHER PHOSPHOLIPASE D 21 841 IPR015679 -
Lele34g0242 852 SUPERFAMILY Phospholipase D/nuclease 546 783 - -
Lele34g0242 852 Gene3D Endonuclease Chain A 513 755 - -
Lele34g0242 852 SUPERFAMILY Phospholipase D/nuclease 194 461 - -
Lele34g0242 852 PIRSF PLD_plant 16 852 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lele34g0242 852 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 698 725 IPR001736 GO:0003824
Lele34g0242 852 Pfam Phospholipase D Active site motif 699 725 IPR001736 GO:0003824
Lele34g0242 852 Pfam Phospholipase D Active site motif 355 389 IPR001736 GO:0003824
Lele34g0242 852 Gene3D Endonuclease Chain A 228 473 - -
Lele34g0242 852 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 354 389 IPR001736 GO:0003824
Lele34g0242 852 SMART C2_3c 30 157 IPR000008 -
Lele34g0242 852 CDD C2_plant_PLD 25 180 - -
Lele34g0242 852 SMART pld_4 698 725 IPR001736 GO:0003824
Lele34g0242 852 SMART pld_4 354 389 IPR001736 GO:0003824
Lele34g0242 852 FunFam Phospholipase D delta 226 470 - -
Lele34g0242 852 Pfam Phospholipase D C terminal 772 842 IPR024632 -
Lele34g0242 852 Pfam C2 domain 29 160 IPR000008 -
Lele34g0242 852 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 26 180 IPR035892 -
Lele34g0242 852 ProSiteProfiles C2 domain profile. 10 158 IPR000008 -
Lele34g0242 852 Gene3D C2 domain 25 179 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0242 Lele-ChrLele34 1990404 1998410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0242 26 851 Phospholipase D Gene Family (Wang group) AT4G11850 53.964 0.0 914