Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0241 ATGAATGTGTTTCTCAAATTTGGTTCTCGCTGGAACACCATTTGCATGGGAAGTTCGTGCCCATATAAACGGCCGAACCGGAAACTTCCCAGACAATCTGGGAAACCCATAACTTTATTCAGTTCACTGTTCCTTCAGCTGCTTAAAGTTCACCGTTCTCGGGTATCCTCGTCAAATTTTTTTTCTAGGTTCCAGCGGGCCATCATGATTGCTGAACACACAAACCTCCGGCTTATTGCCTACTCACAAGAGATTGTAGATGGACAGCTGATTTTTGTTTCTTCTAACTGTTTTCCTATTAAGGCTTCAAACTTTGAACCTGCAGGCCATGCCTTTCATTCAGCTGCCCTTAAACTTCTTGGTGTTGAGGAAGATAATGCAGATGGTGATGATACGAAGGTGGTTGATGATAAGGAACAGATGTACTCTGCATCATATGATTCTTATAGCAGCAAGAGTAAGAAGAGATCTGGTGCTGGAGACAAGCAACAGGATCACTATGCATTATTGGGTTTGAGCCATCTAAGGTATCTTGCTACGGAGGATCAAATTCGTAAAAGCTATCGTGAAACTGCATTGAGGTATCATCCAGATAAACAGGCTGCTCTTCTGCTTGGTGAGGAGACTGAAGCTGCAAAACAGGCAAAGAAGGATGAAATAGAAAGTCATTTTAAGGCAATCCAGGAAGCATATGAAGTATTGATTGATCCAGTGAAGCGAAGAATGTATGATTCCACTGATGAGTTTGATGATGAAATTCCCACTGATTGTTCTCCACAAGACTTCTTCAAAGTGTTTGGTCATGCTTTTATGAGGAATGGACGGTGGTCAGTTACTCAACCAGTTCCGTCTTTAGGAGATGACAATACTCCACTAAAAGAAGTTGATGCATTCTATGATTTCTGGTATGCATTTAAAAGCTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCGAGGAAGGAAGAGTATGCTCGTATTCGTGCTCTTGTTGATAACGCTTATAAGAGAGACCCAAGAATACAGAGGAGAAAGGAAGAGGAAAAAGCTGAGAAGCAAAGGAAAAAAGAGGCTAAGATTCTGGCCAAAAAATTGCAGGAAGAAGAAGCTGCTAGAATTGCAGAAGAGGAGAAGAGACGGAAGGAGGAGGAGGAGAGAGAAGCTGCAGAAGCTGCTTTACAACAAAAGAAGGTGAAGGAGAAAGAGAAAAAGCTCTTGCGGAAAGAGCGAACTCGTCTTCGAACACTGGCGGCACCCATCTTGTCAAAGAGAACACATGATATATCTGAGGATGATGTAGAAAGTGTTTGTCTGTCACTTGATATTGAGAAGTTGAGGAATTTGTGCCAAATGATTGAAGGAAAACCCATCTCAGAGCAAGCAGAAATTCTAAGAGATGCTCATGGTTCTAAAAAAGATGCAGATGACAAGAAATCTGGGAAAACTGATAAAAAGGATGGTTCTGCAAGTGCTAATGGCAGTGCCTCACTACGCTACACCAATGAGAAGAAGGAAAAACCTTGGAGTAAAGAAGAGATTGAGCTATTGAGAAAAGCAATGCAAAAATATCCTAAAGGAACTTCTCGGAGGTGGGAGGTCGTTTCAGAGTACATTGGCACAGGAAGATCTGTGGAAGAAATTTTGAAGGCAACCAAAACAGTTCTCCTCCAGAAGCCTGATTCTTCCAAATCATTTGATGCATTCCTTGAGAAAAGGAAACCTGCACCAACAATTGCGTCTCCGCTCTCAACCCGAGAAGAATTAACCGGTGAATCAGCTCCTGGAAGGCCTGCAAACCGTGCTACCTCAGCAACAAACAACTCTGAAGAGTCTCATGGCAAGATTACTTCAGACAACCCAAGCTCTTCTGGTTCGGCACCTGCCAGTGGAGCTTCCTCTAGTTCAGATCAAGATGCTTGGTCCGCTGTTCAGGAGAAAGCACTGGTCCAGGCTCTGAAAGCTTTCCCCAAGGAAACTAACCAGAGATGGGAACGAGTTGCGGCTGCTGTTCCTGGGAAGACGGTGAATCAGTGCAAGAAAAAATTTACAATGTTGAAGGAGAACTTCAGAAGCAAGAAAAGTGCAGCATAA 2160 0.4315 MNVFLKFGSRWNTICMGSSCPYKRPNRKLPRQSGKPITLFSSLFLQLLKVHRSRVSSSNFFSRFQRAIMIAEHTNLRLIAYSQEIVDGQLIFVSSNCFPIKASNFEPAGHAFHSAALKLLGVEEDNADGDDTKVVDDKEQMYSASYDSYSSKSKKRSGAGDKQQDHYALLGLSHLRYLATEDQIRKSYRETALRYHPDKQAALLLGEETEAAKQAKKDEIESHFKAIQEAYEVLIDPVKRRMYDSTDEFDDEIPTDCSPQDFFKVFGHAFMRNGRWSVTQPVPSLGDDNTPLKEVDAFYDFWYAFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLSEKARKEEYARIRALVDNAYKRDPRIQRRKEEEKAEKQRKKEAKILAKKLQEEEAARIAEEEKRRKEEEEREAAEAALQQKKVKEKEKKLLRKERTRLRTLAAPILSKRTHDISEDDVESVCLSLDIEKLRNLCQMIEGKPISEQAEILRDAHGSKKDADDKKSGKTDKKDGSASANGSASLRYTNEKKEKPWSKEEIELLRKAMQKYPKGTSRRWEVVSEYIGTGRSVEEILKATKTVLLQKPDSSKSFDAFLEKRKPAPTIASPLSTREELTGESAPGRPANRATSATNNSEESHGKITSDNPSSSGSAPASGASSSSDQDAWSAVQEKALVQALKAFPKETNQRWERVAAAVPGKTVNQCKKKFTMLKENFRSKKSAA 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0241 719 CDD SANT 530 570 IPR001005 -
Lele34g0241 719 CDD SANT 662 709 IPR001005 -
Lele34g0241 719 SUPERFAMILY Chaperone J-domain 163 272 IPR036869 -
Lele34g0241 719 CDD DnaJ 165 236 IPR001623 -
Lele34g0241 719 FunFam Myb family transcription factor 657 717 - -
Lele34g0241 719 SMART dnaj_3 164 239 IPR001623 -
Lele34g0241 719 MobiDBLite consensus disorder prediction 488 508 - -
Lele34g0241 719 ProSitePatterns Nt-dnaJ domain signature. 224 243 IPR018253 -
Lele34g0241 719 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 78 718 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Lele34g0241 719 Pfam DnaJ domain 165 244 IPR001623 -
Lele34g0241 719 Gene3D - 523 581 - -
Lele34g0241 719 SMART sant 527 580 IPR001005 -
Lele34g0241 719 SMART sant 659 711 IPR001005 -
Lele34g0241 719 SUPERFAMILY Homeodomain-like 661 715 IPR009057 -
Lele34g0241 719 MobiDBLite consensus disorder prediction 584 664 - -
Lele34g0241 719 Gene3D DnaJ domain 161 279 IPR036869 -
Lele34g0241 719 MobiDBLite consensus disorder prediction 488 533 - -
Lele34g0241 719 MobiDBLite consensus disorder prediction 619 664 - -
Lele34g0241 719 SUPERFAMILY Homeodomain-like 529 572 IPR009057 -
Lele34g0241 719 ProSiteProfiles SANT domain profile. 658 713 IPR017884 -
Lele34g0241 719 ProSiteProfiles Myb-like domain profile. 523 578 IPR001005 -
Lele34g0241 719 MobiDBLite consensus disorder prediction 399 418 - -
Lele34g0241 719 Pfam Myb-like DNA-binding domain 662 708 IPR001005 -
Lele34g0241 719 Pfam Myb-like DNA-binding domain 529 570 IPR001005 -
Lele34g0241 719 Coils Coil 371 434 - -
Lele34g0241 719 Gene3D - 653 719 - -
Lele34g0241 719 ProSiteProfiles dnaJ domain profile. 165 247 IPR001623 -
Lele34g0241 719 ProSiteProfiles Myb-like domain profile. 655 709 IPR001005 -
Lele34g0241 719 PRINTS DnaJ domain signature 188 203 IPR001623 -
Lele34g0241 719 PRINTS DnaJ domain signature 170 188 IPR001623 -
Lele34g0241 719 PRINTS DnaJ domain signature 219 239 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0241 Lele-ChrLele34 1983386 1987602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0241 150 364 C2H2 Transcription Factor Family AT1G74250 29.528 9.89e-20 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele34g0241 DnaJ 5.8e-18 CL0392