LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele34g0238	ATGCCTAAACTTTCGACTTTCTTGTTCTTCTCCGTCGTAGTCGTCATCGTCTTCGTCTCCATTTCACCTCTTTCCTATGGGTACGATCCACTGGACCCCAATGGAAACATCACAATCACATGGGATTTCATAGCAGATAATGACGACACTTACGATGTGAGGGTATGGATACACAATTGGCAATTATATCGACACGTGGAGAAGCCGGGTTGGAGGCTAAGTTGGGCATGGAGAGGTGATGAGGTCATATGGAGCATGACAGGAGCAGAGGCAACAGAGCAAGGCAACTGTTCAAGGTTTAAGGGACAAAACAATCCACATTGCTGTGATAAGCAACCAACCATCATTGATCTTATGCCTGGCACTCCTTATAACAAGCAAGTTCCCAATTGTTGCAAACAAGGGATCCTATCATCTCTCACTCAAGATCCCACCCAAATCACTTCCATGTTCCAGATGAATTATAATAAGCCCTCTGTTCCGAACCCTAACAACATCACCGTGCCTGCTAATTTCAGCCTTGGAATCCCCGGTTACTCCTGTAGTGAACCTACTCAGGTCCCTCCTAGCAAATTCACCATTGATAGTCGTCGATGGACACAAGTTCTTGAAACATGGAATGTGACATGTATATACTCTCAATTCTTATCATCAACAGCCCCAAAATGTTGTGTGTCATTGTCTGCTTTCTACAGTGATACCATTGTTCCTTGCCCTAGATGCAGCTGTAATTGCCAAGGCCTACCAGGAGCATACTGTGTCAATTCTGATAAAGCTCCTTCATTGTTGAAACTGCCACAAGATGATAGCACACAAGATACAGAACCAGTGGTGAGGTGTTCACAGCACATGTGCCCTATAAGGATTCATTGGCATGTGAAGCAGAGCTATACAAAGTATTGGAGAGTGAAGATCACAATCACAAATTATAACTTTGTAAAGAACTATTCTCAGTGGAATCTTGTTCTCTTACACCCTAACTTGCAGAGTTTAACCCAAGTCTTCAGCTTCAACCACCAACCTCTCAAAATTTTTGGGGATATCAATGACACAGTGATGTTCTGGGGGGTAAAGTACTACAATGACATGTTGCTGACACATGGGGAGAATGGGAATGTGCAAACAGAGATGCTGCTTCACAAAGATGCTGGAATCTTCACATTCAATGGAGGATGGGGTTTTCCCAGAACTGTTTTATTTAATGGAGATGATTGTGTTATGCCCAGTCCTGATAATTACCCTACCCTTCCCAATACTGCTTCTTTTCCCTCCTCTTCTTCCTCCTCCTTGCTTTTCTTATCTTTTATCTTCTCAATATTGTTGTGGTGA	1329	0.4312	MPKLSTFLFFSVVVVIVFVSISPLSYGYDPLDPNGNITITWDFIADNDDTYDVRVWIHNWQLYRHVEKPGWRLSWAWRGDEVIWSMTGAEATEQGNCSRFKGQNNPHCCDKQPTIIDLMPGTPYNKQVPNCCKQGILSSLTQDPTQITSMFQMNYNKPSVPNPNNITVPANFSLGIPGYSCSEPTQVPPSKFTIDSRRWTQVLETWNVTCIYSQFLSSTAPKCCVSLSAFYSDTIVPCPRCSCNCQGLPGAYCVNSDKAPSLLKLPQDDSTQDTEPVVRCSQHMCPIRIHWHVKQSYTKYWRVKITITNYNFVKNYSQWNLVLLHPNLQSLTQVFSFNHQPLKIFGDINDTVMFWGVKYYNDMLLTHGENGNVQTEMLLHKDAGIFTFNGGWGFPRTVLFNGDDCVMPSPDNYPTLPNTASFPSSSSSSLLFLSFIFSILLW	442

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele34g0238	442	PIRSF	COBRA	3	442	IPR006918	GO:0010215\|GO:0016020
	Lele34g0238	442	Pfam	COBRA-like protein	51	213	IPR006918	GO:0010215\|GO:0016020
	Lele34g0238	442	PANTHER	PROTEIN COBRA	14	432	IPR006918	GO:0010215\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele34g0238	Lele-ChrLele34	1967432	1971154	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele34g0238	5	437	COBRA Gene Family	AT3G02210	51.016	9.68e-162	462