Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0237 ATGAACCACATGATGTTTGGAATTAACATGAATTCCTTGGTGAATTTCAAACGACATGTCGTCTACAGGGAGTGTGTGCATAACCATGCAGCCTCACTTGGTGGAGTAGCCAGAGATGGTTGCTATGAATTTCTGCAACCTCGTCTTGTCGACGGTGGCTCACCGGAGGAGGCAATGCTTTGTGCAGTTTGCGGATGCCACCGAAACTATCACCGGAGACAGATTGTCCTTACTCCGCCCATGCCCCCCCAAAGGCCACCTACAGTGGCTGCAAATGAGGGAAATGTCGTGGAGGGGCTGGCTGCGGTGGTGGCTTCGCCACCGCTGAGGAGGAGGAAGTGGAAGAGGACTAATTTCACGGAGGAGCAAAAGAGTCGAATGGCGAGTTTTGCAGAGATGTTGGGTTGGAAGGTTAAGAGAGCTGACAAGGAAGAAACTCTGAGGTTTTGCATGGAAATAGGAATCACTCGTAAGATGTTTGTTGTTTGGCTGAACAACAACCGACGAGAGAATCCAAATCAAACTAACGAGTGA 534 0.4963 MNHMMFGINMNSLVNFKRHVVYRECVHNHAASLGGVARDGCYEFLQPRLVDGGSPEEAMLCAVCGCHRNYHRRQIVLTPPMPPQRPPTVAANEGNVVEGLAAVVASPPLRRRKWKRTNFTEEQKSRMASFAEMLGWKVKRADKEETLRFCMEIGITRKMFVVWLNNNRRENPNQTNE 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0237 177 Gene3D - 105 174 - -
Lele34g0237 177 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 18 169 - -
Lele34g0237 177 SUPERFAMILY Homeodomain-like 107 169 IPR009057 -
Lele34g0237 177 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 22 74 IPR006456 -
Lele34g0237 177 Pfam ZF-HD protein dimerisation region 20 75 IPR006456 -
Lele34g0237 177 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 22 74 IPR006456 -
Lele34g0237 177 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 113 168 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0237 Lele-ChrLele34 1961683 1962216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0237 20 171 ZF-HD Transcription Factor Family AT5G60480 37.143 2.25e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele34g0237 ZF-HD_dimer 1.1e-21 No_clan