Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0225 ATGGTCCCCTTGATTGTTCTCACCTTGTTCTGTCTTCTGGGTTCCTGCGTTTCTGCATCCTCTTTGCTCAGTGACTTCCATGTCTTAGCCTCACTCAAAGAGGAGTTCCAATTCCCAGACCCTGCTCTAAGTACTTGGAACACCTCAAATTCAAGCTCAGTTTGTTCGTGGGTTGGAATTCAGTGCCACCATGGTCGAGTAGTGTCGGTGGACTTGACGGATTTGAATCTGTATGGCTCAGTTTCTGCTTCAATTTCGAGACTTGATCAGCTCACCCAACTTTCACTTGCAGGAAACAACTTCACAGGCAGCATTGAGATCACCAACTTGAGCAGCCTTCAGTATCTGAACATCTCGAACAACCAGTTCAGTGGCTCCTTGGATTGGAACTACTTCACCATGGAGAACTTGGAGGTTATTGATGCCTATAACAACAACTTCACTGCCTTGCTTCCATTGGGGGTTTTGACTTTGAAGAAGCTCAGGCACTTCGATCTTGGTGGGAACTTTTTCTATGGCACAATCCCAGAAAGCTATGGAGATTTAGTGGCGCTGGAATATCTCTCACTTGCAGGAAATGATCTACGAGGGAAAGTCCCAGGTGCGTTAGGCAATCTCAGTAACTTGAAAGAGATTTACTTGGGCTATTACAACTCTTTTGAAGGTGGGATTCCAATGGAGTTGGGGAAGTTGGTTAATTTAGTTCACATGGATCTTTCAACCTGTGATTTGGACGGTCCAATTCCAAAAGAACTGGGAAACTTGATAGAGCTTGATACTCTTTTCTTGCATATCAATCAGCTATCTGGCTCCATACCAAAACAACTCAGCAACTTGACCAAGTTGGTGTACCTTGATCTTTCCAGAAACTCACTCACTGGTGAAATCCCACTTGAGTTCATCAATCTCAGGCAGCTCAAGCTTTTCAATCTCTTGGGGAACAGATTGCATGGGTCCATACCAGACTACATTGCAGAGTGGCCAAATTTAGAGTCACTTGCGCTGTGGAAGAACAACTTCACAGGAGAAATCCCTCAGGATCTTGGCCAAAATGGGAAGTTGCAAAATATTGATTTGTCATCTAACAAGCTCACTGGTATAATCCCACCTCATCTTTGTTCCTCAAACCAGCTTAAAATCCTGATTCTCCTAAACAATTTCCTCTTTGGTCCCATACCAGAAAGTCTAGGAACTTGTTACAGTCTCACTAGAGTAAGGTTAGGACAGAACTACCTCAATGGTAGCATTCCCGATGGTTTTCTTTACCTTCCTAACCTAAATTTTGCCGAGTTGCAGAATAACTACTTATCAGGAACGTTGTCAGAGAATGGAAATAGCTCTTCTCAGCCCGTTAACTTAGGTCAGCTCAATTTGTCAAATAACAGCTTATCTGGTCCTTTACCAGATTCACTCTCTAATTTCTCTTCCATTCAGATGCTTTCGCTCAGTGGAAACCAATTCTCTGGTCCAATCCCTTCTTCCATTGGACAACTCCATCAAGTTCTAAGGCTTGATCTTAGCAGGAACTCATTTTCTGGAGAGATTCCACCTGAAATTGGAAACTGTTTCCATCTTACTTATCTTGACATGAGCCAGAACAACCTCTCTGGATCAATACCAAATGAGATTTCCAATATCCACATTCTGAATTACTTGAACTGGTCAAGGAACCATTTGAATGAAACCATCCCCAAGTCAATTGGCGCCATGAAGAGTCTCACTACTGCTGATTTCTCCTTCAACGATTTCTCAGGAAAATTGCCAGAAACAGGGCAGTTTGCCTTCTTCAATGCCTCAGCTTTCGCGGGTAACCCTCAACTCTGCGGTTCTCTCCTGAACAACCCTTGCAACTTCACCGCAATTGCAACCTCTCCAGGGAAAAGCTCTGCAGATTTCAAGCTCATCTTTGCACTTGGCCTTCTAATATGCTCCTTAGTGTTCGCCGTTGCAGCCATAATCAAAGCCAAATCGTTCAGAAAGAACGGCCCCGGTTCATGGAAAATGACGGCATTTCAGAAAATCGACTTCACAGTCTCCGACATCCTCGAATGCGTCAAAGACGGCAATGTGATTGGAAGAGGCGGCGCCGGGATTGTTTATCACGGGAAAATGCCAAACGGAGTCGAAATCGCCGTGAAGAAGCTTCTAGGATTTGGCGCCAACAGCCACGACCATGGCTTCCGAGCCGAGATTCAAACCCTAGGCAAAATCAGACACAGAAACATCTACATGTCCACCATTGCAGGATCGTATGGCTACATCGCTCCTGAATATGCTTACACGTTAAGAGTGGACGAGAAGAGCGATGTTTATAGCTTTGGAGTGGTATTATTAGAGTTGATAACGGGGCGACGGCCAGTAGGAGATTTTGGAGAAGGAGTGGACCTGGTGCAATGGTGCAAGAAGGCAACAAATGGGCGGAAAGAACCAGTGATGAACATTGTCGACCTGAGGCTTTCTGTTGTAGCAAAGGAAGAAGCAATGCACATGCTATTCATTGCCATGCTGTGCTTGCAAGACCACAGTGTTGTGAGGCCAACAATGCGAGAAGTGGTTCAAATGCTCTCCGAATTCCCTCCTCCTCCTCCTCCTCCGGCCTCACATCACGACAACAATCAAACAACATCATCATCTTCATATTCCAACAACATTAAAAGCCTTGAGAAACAAAAACCTTGTCCACCAACTTTCAAACAAGACCTTTTGCCTTGA 2712 0.4476 MVPLIVLTLFCLLGSCVSASSLLSDFHVLASLKEEFQFPDPALSTWNTSNSSSVCSWVGIQCHHGRVVSVDLTDLNLYGSVSASISRLDQLTQLSLAGNNFTGSIEITNLSSLQYLNISNNQFSGSLDWNYFTMENLEVIDAYNNNFTALLPLGVLTLKKLRHFDLGGNFFYGTIPESYGDLVALEYLSLAGNDLRGKVPGALGNLSNLKEIYLGYYNSFEGGIPMELGKLVNLVHMDLSTCDLDGPIPKELGNLIELDTLFLHINQLSGSIPKQLSNLTKLVYLDLSRNSLTGEIPLEFINLRQLKLFNLLGNRLHGSIPDYIAEWPNLESLALWKNNFTGEIPQDLGQNGKLQNIDLSSNKLTGIIPPHLCSSNQLKILILLNNFLFGPIPESLGTCYSLTRVRLGQNYLNGSIPDGFLYLPNLNFAELQNNYLSGTLSENGNSSSQPVNLGQLNLSNNSLSGPLPDSLSNFSSIQMLSLSGNQFSGPIPSSIGQLHQVLRLDLSRNSFSGEIPPEIGNCFHLTYLDMSQNNLSGSIPNEISNIHILNYLNWSRNHLNETIPKSIGAMKSLTTADFSFNDFSGKLPETGQFAFFNASAFAGNPQLCGSLLNNPCNFTAIATSPGKSSADFKLIFALGLLICSLVFAVAAIIKAKSFRKNGPGSWKMTAFQKIDFTVSDILECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGANSHDHGFRAEIQTLGKIRHRNIYMSTIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELITGRRPVGDFGEGVDLVQWCKKATNGRKEPVMNIVDLRLSVVAKEEAMHMLFIAMLCLQDHSVVRPTMREVVQMLSEFPPPPPPPASHHDNNQTTSSSSYSNNIKSLEKQKPCPPTFKQDLLP 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0225 903 Pfam Leucine Rich Repeat 353 373 IPR001611 GO:0005515
Lele34g0225 903 Pfam Leucine Rich Repeat 524 545 IPR001611 GO:0005515
Lele34g0225 903 Pfam Leucine Rich Repeat 281 302 IPR001611 GO:0005515
Lele34g0225 903 SUPERFAMILY Protein kinase-like (PK-like) 682 873 IPR011009 -
Lele34g0225 903 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Lele34g0225 903 Gene3D Phosphorylase Kinase; domain 1 650 744 - -
Lele34g0225 903 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 331 620 - -
Lele34g0225 903 MobiDBLite consensus disorder prediction 855 903 - -
Lele34g0225 903 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 132 218 - -
Lele34g0225 903 Gene3D Ribonuclease Inhibitor 303 621 IPR032675 -
Lele34g0225 903 Gene3D Transferase(Phosphotransferase) domain 1 745 891 - -
Lele34g0225 903 SUPERFAMILY RNI-like 69 411 - -
Lele34g0225 903 Gene3D Ribonuclease Inhibitor 25 129 IPR032675 -
Lele34g0225 903 Gene3D Ribonuclease Inhibitor 237 302 IPR032675 -
Lele34g0225 903 Pfam Protein tyrosine and serine/threonine kinase 752 855 IPR001245 GO:0004672|GO:0006468
Lele34g0225 903 Gene3D Ribonuclease Inhibitor 130 236 IPR032675 -
Lele34g0225 903 MobiDBLite consensus disorder prediction 869 889 - -
Lele34g0225 903 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 24 131 - -
Lele34g0225 903 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 744 856 - -
Lele34g0225 903 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 219 324 - -
Lele34g0225 903 SUPERFAMILY L domain-like 353 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0225 Lele-ChrLele34 1851804 1856782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0225 718 863 Receptor kinase-like Gene Family AT5G65700 57.534 5.11e-47 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele34g0225 PK_Tyr_Ser-Thr 2.8e-07 CL0016