Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0217 ATGGCGTCTGCAAGCCTTGGAAATGGTGGGGTCGGCAGTTCCAGGTCTGCTAATGGCTTCAGAGAGTCATCTAGTTCGGTGGATTGGCTTGGGAGAGAGATGCTTGAGATGAGGTTGAGGGACAAGGATAGCGAGCCTGACATAATCGATGGTGTGGGTACTGAAACAGGACATGTGATAAGAACCAGCATTGGTGGTCGAAATGGCCAATCTAAGCAGAATGTCAGCTATATTGCGGAGCACGTGATTGGAACAGGCTCTTTTGGTGTTGTTTTCCAAGCAAAATGCAGAGAAACTGGAGAGATTGTGGCCATTAAAAAGGTTCTTCAGGACAAGCGCTACAAAAATAGGGAGTTGCAGATTATGCAAATGCTGGATCATCCACATGTTGTTGCCCTTAAGCATCATTTCTTTTCGACGACTGACAAAGAGGAGCTTTACTTGAATCTTGTGCTTGAATATGTTCCTGAAACTGTTAATCGTATTGCAAGGAATTATAGCAGGATCAACCAGCGAATGCCTTTAATATATGTTAAGCTTTACGCCTACCAGATTTGCAGGGCTCTTGCATATATACATAATTGCATTGGAATTTGCCATCGTGACATCAAACCTCAGAATCTACTTGTGAATCCACATACACATCAGCTGAAACTTTGTGATTTTGGAAGTGCAAAAGTGTTGGTGAAAGGAGAGCCAAATGTTTCTTACATCTGTTCAAGATATTATCGTGCTCCAGAACTTATTTTTGGCGCCACTGAGTATACAACTGCCATAGATATATGGTCAACCGGATGTGTAATGGCTGAATTACTTCTTGGGCAGCCTCTGTTTCCTGGAGAAAGTGGAGTTGACCAACTTGTTGAGATCATTAAGGTTTTAGGAACTCCAACCAGGGAAGAGATAAAATGCATGAACCCAAATTATACTGAATTTAAGTTTCCACAGATTAAACCTCATCCATGGCATAAGGTCTTTCAGAAGCGGTTACCCCCTGAAGCAGTGGACCTTGTGTGTCGGTTCTTTCAGTATTCTCCCAATTTGCGATGCACTGCTTTGGAAGCTTGCATTCATCCTTTCTTTGATGAATTGAGGGATCCAAACACCCGCCTTCCTAATGGCCGCCCGCTTCCTCCTCTTTTTAATTTTAAAGCTGCAGAGCTCTCCGGTACACCGCAAGACGTCATCAATCGGCTTATTCCAGAGCATGCTCGTAAGCAGAGCTTATTTATGGCTTTGCACACCTAG 1248 0.4359 MASASLGNGGVGSSRSANGFRESSSSVDWLGREMLEMRLRDKDSEPDIIDGVGTETGHVIRTSIGGRNGQSKQNVSYIAEHVIGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPHVVALKHHFFSTTDKEELYLNLVLEYVPETVNRIARNYSRINQRMPLIYVKLYAYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFNFKAAELSGTPQDVINRLIPEHARKQSLFMALHT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0217 415 FunFam Shaggy-related protein kinase kappa 157 405 - -
Lele34g0217 415 Pfam Protein kinase domain 79 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0217 415 ProSiteProfiles Protein kinase domain profile. 77 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0217 415 SUPERFAMILY Protein kinase-like (PK-like) 76 388 IPR011009 -
Lele34g0217 415 Gene3D Phosphorylase Kinase; domain 1 62 156 - -
Lele34g0217 415 FunFam Glycogen synthase kinase-3 beta 61 156 - -
Lele34g0217 415 Gene3D Transferase(Phosphotransferase) domain 1 157 405 - -
Lele34g0217 415 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 45 407 - -
Lele34g0217 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Lele34g0217 415 SMART serkin_6 77 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0217 415 MobiDBLite consensus disorder prediction 1 22 - -
Lele34g0217 415 ProSitePatterns Protein kinases ATP-binding region signature. 83 107 IPR017441 GO:0005524
Lele34g0217 415 CDD STKc_GSK3 72 364 IPR039192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0217 Lele-ChrLele34 1786643 1791971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0217 83 369 Core Cell Cycle Gene Families AT1G76540 35.254 1.16e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lele34g0217 Pkinase 2.8e-64 CL0016