Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0209 ATGGGATCCTTATGCTCTAGAGGGACAAATTCACACAATTATGTCGCAGAAAACCATGTTCAGAAAACGAAGAAATCCTCAAAGGCAAATAGGGATAAAAAACTTGCAATGCAAGAAGAATGTAGTGGATCAAACGATGTTAATACAAGGTTGATATATTCAGACGAGGGGGAGAAGAATGGTGAGACAACAGGGAAACCTGGGAGTTCGCAAATTAGAAGTGTAGAAGAAGGACCAAATAGGATGACGGTGTTGAATAGGATAGGTAGTATAAAAAGAGGAGAAATAGGAGCCCAAGTTCTTGCTGGGTGGCCTTCATGGTTATCTGCTGTTGCAGGAGAAGCCATTAGTGGTTGGATTCCACGTAGATCAGAATCCTTTGAGAAGTTAGAGAAGATTGGACAAGGGACATATAGCAGCGTTTACAAAGCTAGAGATTTGGAAACAAATAAAATAGTTGCATTAAAGAAGGTTCGATTTACAAATATGGACCCAGAAAGTGTTCGTTTCATGGCCAGAGAAATCATTATATTACGACGACTTGATCATCCAAATGTCATGAAGCTTGAAGGCATGATCACCTCAAGGGTTTCTGGCAGCTTATACCTTGTTTTTGAATATATGGAACATGATCTCACAGGCCTAGCAGCTCTTCATGGCGTCAAGTTTTCTGAAGAACAGATAAAGTGCTACATGCAGCAACTATTGAGAGGGTTAGAGCATTGCCACAAGAAGGGAGTGCTACACAGAGACATAAAGGGAGCAAATTTGCTAATAGACTATAAGGGCACTTTGAAAATTGCAGATTTTGGACTCGCTACTGTGTCGGATGGCCAAGCATTGACCAGCAGAGTCGTAACCTTGTGGTACAGATCCCCTGAACTGTTGCTCGGAGCCACCAATTATAGCGTTGCTGTTGACTTGTGGAGTGCTGGTTGCATTCTCGCAGAACTCTTCTACGGCAAGCCTATCACTCCCGGTCGAACCGAGGTGGAGCAACTGCATAAGATATTTAAGCTTTGTGGATCGCCTTCTGAGAAATACTGGAAGAAGTCGAAGCTACCACATGCCACCATTTTCAAACCTCGACATCCTTACAAGCGCGTTGTTGGAGAGACATTCAAGGATTTTCCAGCCTCTGCTCTCAAACTTCTCGATGTGCTTCTTGCTATTGAACCTGACGATCGAGGAACTGCTTCCTCAGCACTTCAGAGCGAGTTCTTCACGACAGAGCCGCTGCCTTGTGAGCCATCGAGTTTGCCTAGGTATCCACCAAGTAAGGAGTTTAATGTGAAGCTTCGAGAAGAGGAAGCTAGAAGGTATACATCTATGTCATTCCATCTCTTCGTCACTTACCTTTTGTATTTACTCTCTCCTTGCATAAATGGGGACTTTTTGAATCGAGCAGGGACAAAGACAGAGCGTAGACTGGAGAAGAACGGTTTGCTGATTGAACCGGCAAGCACAAGAGGACCCAAAGTACTGTGTCATTCAGGCCAATCCACGGTGCAGAGCGCCTACATGAAAGTCATGAAGCATGAAGCTGCCGGAGGAGAACTCGAGCTGTTTGTCGGAACCAGGAGAAAGCAGAGAGCAAATTGGAATGCTGCCAACGCCGCCCGTCTCTCCAAGTTCTCTAACTCTGTCAATGCCGACGGCGGCTCCCGGCTCGACGTCATCGCCACTGCCGGAGGGAACTCCTCCGTGTGGGGAGGCGATGGCTTCGGCGAGAGGTATAGACATGCGGCCGCCGGAGAATCCGACCTCTTGATGCCTGCATCCCGCAAATCTTGTCTCAACAAACCTCTTTCTAAGGTATTCTGA 1824 0.4616 MGSLCSRGTNSHNYVAENHVQKTKKSSKANRDKKLAMQEECSGSNDVNTRLIYSDEGEKNGETTGKPGSSQIRSVEEGPNRMTVLNRIGSIKRGEIGAQVLAGWPSWLSAVAGEAISGWIPRRSESFEKLEKIGQGTYSSVYKARDLETNKIVALKKVRFTNMDPESVRFMAREIIILRRLDHPNVMKLEGMITSRVSGSLYLVFEYMEHDLTGLAALHGVKFSEEQIKCYMQQLLRGLEHCHKKGVLHRDIKGANLLIDYKGTLKIADFGLATVSDGQALTSRVVTLWYRSPELLLGATNYSVAVDLWSAGCILAELFYGKPITPGRTEVEQLHKIFKLCGSPSEKYWKKSKLPHATIFKPRHPYKRVVGETFKDFPASALKLLDVLLAIEPDDRGTASSALQSEFFTTEPLPCEPSSLPRYPPSKEFNVKLREEEARRYTSMSFHLFVTYLLYLLSPCINGDFLNRAGTKTERRLEKNGLLIEPASTRGPKVLCHSGQSTVQSAYMKVMKHEAAGGELELFVGTRRKQRANWNAANAARLSKFSNSVNADGGSRLDVIATAGGNSSVWGGDGFGERYRHAAAGESDLLMPASRKSCLNKPLSKVF 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0209 607 MobiDBLite consensus disorder prediction 18 39 - -
Lele34g0209 607 CDD STKc_CDK9_like 127 408 - -
Lele34g0209 607 FunFam probable serine/threonine-protein kinase At1g54610 210 447 - -
Lele34g0209 607 PANTHER CELL DIVISION PROTEIN KINASE 125 414 - -
Lele34g0209 607 SUPERFAMILY Protein kinase-like (PK-like) 122 415 IPR011009 -
Lele34g0209 607 FunFam probable serine/threonine-protein kinase At1g54610 114 209 - -
Lele34g0209 607 MobiDBLite consensus disorder prediction 1 76 - -
Lele34g0209 607 SMART serkin_6 127 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0209 607 ProSiteProfiles Protein kinase domain profile. 127 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0209 607 Gene3D Phosphorylase Kinase; domain 1 114 209 - -
Lele34g0209 607 Pfam Protein kinase domain 127 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0209 607 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Lele34g0209 607 MobiDBLite consensus disorder prediction 1 17 - -
Lele34g0209 607 Gene3D Transferase(Phosphotransferase) domain 1 210 447 - -
Lele34g0209 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0209 Lele-ChrLele34 1728104 1732794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0209 119 440 Core Cell Cycle Gene Families AT5G10270 51.906 7.32e-113 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele34g0209 Pkinase 8.9e-71 CL0016