Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0206 ATGCCTTCACTTACGATCCTGGACTTATCTTACACTAGTGTACGAGAACTACCAGACGCTCTTTTTGAGTTGCTGCAGCTCAGAGAAATGTATTTGAAAGGTTGTGAATGTTTCATGAAATTATCACCGAAGATTGTGAAATTGAAGAAACTTGAAAGGCTTGATCTTGATGGAACTCAGATCATACATCTGCCAGAAGAGATTCAAGAGTTAACCAATCTCCAAAGTTTGTTCCTGTGCTTCTATGAATATCGTGGCAAAAAAGGCAAGCAATATACGTGCTCAACAATTATTCCATCTGATGTAATCTCAAAACTCAAGGGGTTAAAACATTTAGATTTTGTTTGACCGAATGTTTCAGTTGATTTTAGATTTAGTGTTGGTAGGCATATGCAAAGGATCATATCAAGTACACCATCCACATGTGAGGCAAAATTTAAACAGAGTGGTTGTAGCTTGAAGTTTGTAAATGGTGATCATGTCCCTGAAGAAATTAAAAGGCTTGTTAGGCACAGTAAGGCTTTGTTTCTGGAGCGACACAAGACAATCAAGAATCTGTCTGAATTTAACATGATGAATTTAGAACAGCTGCGAGAGCTTATAGTGAAGGATTGTCCCAAAGTAACCACCTTGATAAATGATGGATCATTCAAACATAAAGGAGAGGTTTTCCTCCCGAAATTGAGAAAGATAATGCTTCTCCATCTTCCTGAGTTGAACACCATTTCCAATGGATGTTACATAGCTCCAAGATTGAATAATATGGCAATTTATGATTGCCCAAAGCTCCAAAGCCTTTCTAAGTCGGAACTGTCAAGCCAAACTCTGGAGGTCATTAAGGGAGGAATCAAGTGGTGGGAGGCACTGGCATGGAGTAAAGCAGAATGGGGCATAGGTGGCCGGCCAACAAGTTTTAATTGCATCTTTTCTCCAATTGATAAACGGGCTGACATTATGAATCAATTGGAGTTGGATGATGGTATTGATGACAGTCCAGGGAGCATAGAGGGTGAGCCACTGCAATCTTTCAGTGGCAAGGTCTCCAAGGATATGAGGTCTATCACAACATGTGAGATAATAAGCCTGTCACATGAGGTCTCCGAATTCCTCAACTTTGAGGATGATGATGAACCTGATCCATCAATGATAGTTTATGAACAATTCCTGAATCAGCATGTATATCAAAGCAATGAAGTAGGTGGATTTGGAGGAAGTTCTGCCAACCCTTTCAAGGGGTCTTCTAGAGACATTGGCAATAGCGAGGAGAGGAACGTGAAAGACAGAATTGCATTCAAAACAATGTCAGATGTAGATATACTGGACGACGGGTGTCCTCTTTGGGCAAGTACCCTACGTCTTCTATTGAATAGGTTGTTTCTACTGTCTCCATCACAAGCCAAGAATGATGTCAGTGAACCGCCTGCTATGTTTGTTTTTCTTGCAATGGGAAGGAAAAAGGCAGATGAAGCTGGCCCTGCCACAAAGGCTAAGAAGGAAAAGTTCTCTGTCTCTGCCATGCTTGCCAGTATGGATGAAAAACCCGATAAACCCAAAAAAGTATCTTCTTCAACAAGTAAGCCCAAGGCAAAACCTGCTCCAAAAGTTTCTGCATATGCTGATATCGATCTTCCTCCCTCTGATGATGAAGATGAAGGTGTCATGGAAGAGGAGCAAGAACAAAATAGTGTGCCTAAGCGGTCCACTCAGCAGCAAAGGCCTCTTGAGGTGTCTATCACTGACAAAGAGTTTAAAAAGCGGGAAAAGAAGGATCTTCTTGCTGCCCATGCTCTAGAGTTGGCTAAGCAGGAAGCACTTAAGGATGACCGTGATGCTTTTACTGTGGTCATTGGAAGCCGGACTTCAGTGCTTGACGGAGAAAATGATGCGGATGCCAATGTGAAAGATGTGACAATAGAAAACTTCTCTGTATCAGCTCGGGGTAAAGAACTCCTTAAGAATGCATCAGTGAAGATATCTCATGGGAAGAGGTATGGTTTGGTTGGGCCCAATGGAAAGGGTAAGTCCACACTGTTGAAGCTCCTTGCCTGGAGGAAGATACCAGTGCCAAAGAATATTGATGTGCTTCTGGTTGAACAGGAGGTAATCGGTGATGATAAAACAGCACTTGAAGCTGTTGTTTCAGCTAATGAAGAACTTATTAAAACCCGGCAAGAAGTGGCTCTTCTAAATGCAAGTTCTGTTGAAGAAAGTGCAGACAAGGATGATAGTTATGAAGATGATGCAGGAGAGAAGCTTGCTGAGCTGTATGATAAGTTACAGCTGATGGGATCTGATGCAGCTGAAGCTCAAGCATCAAAGATTCTAGCAGGATTAGGTTTTACAAAGGATATGCAGGGCCGTGCTACAAAATCATTTAGTGGGGGTTGGAGGATGAGAATATCTTTAGCCAGAGCACTATTTGTTCAGCCAACTCTATTATTGCTTGATGAACCGACAAATCATCTTGATCTGAGAGCTGTCCTCTGGTTGGAGGAGTACTTGTGCCGTTGGAAGAAGACTTTGGTGGTAGTCTCACATGATAGGGATTTCCTAAATACAGTTTGCAATGAGATTATTCATCTGCATGATTTGAAACTTCATATCTACCGTGGAAATTTTGATGATTTTGAAAGTGGTTATGAGCAGCGTCGCAAAGAGATGAATAAGAAGTTTGAGATTTATGATAAGCAGTTGAAAGCAGCCAAAAGAAGTGGAAATCGGGTTCAGCAGGAAAAGGTGAAGGATCGAGCTAAGTTTGCGGCTGCTAAGGAAGCATCAAAAGGCAAGGGCAAGGGCAAGGTTGTTGATGAGGATGAAACCCCAGCAGAAGTTCCACAAAAGTGGAGGGATTACAGTGTCGAGTTTCACTTCCCTGAACCTACTGAACTAACACCTCCTCTGCTGCAGCTTATTGAAGTGAGCTTCAGCTATCCAAATCGACGGGATTTCAGACTCTCAAATGTTGATGTTGGCATTGATATGGGGACTCGTGTAGCCATTGTCGGGCCTAATGGAGCTGGGAAATCGACGCTGCTGAATCTTCTTGCAGGTGACTTGTTTCCATCTGAGGGTGAAGTTCGAAGAAGTCAGAAACTGAGGATCGGAAGATATTCCCAGCATTTTGTGGACCTTCTAACAATGGATGAAACACCCGTTCAGTATCTTCTTCGTCACCATCCAGATCAGGAAGGACTCAGCAAGCAAGAGGCTGTCCGAGCAAAACTTGGTAAGTTTGGATTACCTAGCCATAATCATCTTACCCCTATTGCCAAACTATCGGGAGGGCAGAAAGCTCGGGTCGTATTCACCTCGATATCCATGTCAAAGCCCCACATTTTGCTATTGGATGAACCCACTAATCATCTAGACATGCAAAGTATCGATGCTTTAGCCGATGCGTTGGACGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGGTTAATATCACGAGTATGCGAGGATGAAGAGAGGAGTCAAATATGGGTAGTCGAGGATGGTACCGTCAAAACCTTCGATGGAACTTTTGAGGATTACAAGGACGAGTTGCTGAGAGAAATTAAAGCTGAAGTTGATGATTGA 3588 0.4264 MPSLTILDLSYTSVRELPDALFELLQLREMYLKGCECFMKLSPKIVKLKKLERLDLDGTQIIHLPEEIQELTNLQSLFLCFYEYRGKKGKQYTCSTIIPSDVISKLKGLKHLDFVXPNVSVDFRFSVGRHMQRIISSTPSTCEAKFKQSGCSLKFVNGDHVPEEIKRLVRHSKALFLERHKTIKNLSEFNMMNLEQLRELIVKDCPKVTTLINDGSFKHKGEVFLPKLRKIMLLHLPELNTISNGCYIAPRLNNMAIYDCPKLQSLSKSELSSQTLEVIKGGIKWWEALAWSKAEWGIGGRPTSFNCIFSPIDKRADIMNQLELDDGIDDSPGSIEGEPLQSFSGKVSKDMRSITTCEIISLSHEVSEFLNFEDDDEPDPSMIVYEQFLNQHVYQSNEVGGFGGSSANPFKGSSRDIGNSEERNVKDRIAFKTMSDVDILDDGCPLWASTLRLLLNRLFLLSPSQAKNDVSEPPAMFVFLAMGRKKADEAGPATKAKKEKFSVSAMLASMDEKPDKPKKVSSSTSKPKAKPAPKVSAYADIDLPPSDDEDEGVMEEEQEQNSVPKRSTQQQRPLEVSITDKEFKKREKKDLLAAHALELAKQEALKDDRDAFTVVIGSRTSVLDGENDADANVKDVTIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVIGDDKTALEAVVSANEELIKTRQEVALLNASSVEESADKDDSYEDDAGEKLAELYDKLQLMGSDAAEAQASKILAGLGFTKDMQGRATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHIYRGNFDDFESGYEQRRKEMNKKFEIYDKQLKAAKRSGNRVQQEKVKDRAKFAAAKEASKGKGKGKVVDEDETPAEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRRDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLFPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRHHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVEDGTVKTFDGTFEDYKDELLREIKAEVDD 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0206 1195 Gene3D - 934 1194 IPR027417 -
Lele34g0206 1195 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 636 895 IPR003439 GO:0005524
Lele34g0206 1195 Coils Coil 1182 1195 - -
Lele34g0206 1195 Pfam ABC transporter 985 1120 IPR003439 GO:0005524
Lele34g0206 1195 CDD ABCF_EF-3 636 865 - -
Lele34g0206 1195 FunFam ABC transporter F family member 4 933 1195 - -
Lele34g0206 1195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 636 879 IPR027417 -
Lele34g0206 1195 MobiDBLite consensus disorder prediction 490 576 - -
Lele34g0206 1195 SUPERFAMILY L domain-like 2 273 - -
Lele34g0206 1195 Gene3D Ribonuclease Inhibitor 93 280 IPR032675 -
Lele34g0206 1195 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 968 1193 IPR003439 GO:0005524
Lele34g0206 1195 Coils Coil 884 904 - -
Lele34g0206 1195 ProSitePatterns ABC transporters family signature. 792 806 IPR017871 GO:0005524|GO:0016887
Lele34g0206 1195 Gene3D - 633 917 IPR027417 -
Lele34g0206 1195 MobiDBLite consensus disorder prediction 543 557 - -
Lele34g0206 1195 SMART LRR_typ_2 48 71 IPR003591 -
Lele34g0206 1195 SMART LRR_typ_2 1 24 IPR003591 -
Lele34g0206 1195 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 612 1188 - -
Lele34g0206 1195 SMART AAA_5 994 1170 IPR003593 -
Lele34g0206 1195 SMART AAA_5 660 864 IPR003593 -
Lele34g0206 1195 Pfam ABC transporter 651 820 IPR003439 GO:0005524
Lele34g0206 1195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 947 1183 IPR027417 -
Lele34g0206 1195 FunFam ABC transporter F family member 4 634 916 - -
Lele34g0206 1195 Gene3D Ribonuclease Inhibitor 1 92 IPR032675 -
Lele34g0206 1195 CDD ABCF_EF-3 968 1170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0206 Lele-ChrLele34 1707295 1718332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0206 649 856 Calmodulin-binding Proteins AT2G36910 27.700 1.04e-06 51.2