Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0196 ATGGATGATAGGGAGTCTAGGATTAGGATACAGGAGAATATGGAGGCGAGGGAACCAGAAAATTATGAGAAAGGGACGCTGAGAGAGCCACTTATTGTGAGTAGATACAGGGCGAACAACAGTTCCCAGATCGCCATTGTCGGAGCCAATGTCTGTTCCATTGAAAGTCTCGATTACGAGATTATTGAGAGTGATCTTTATATGCAAGATTTGAGATCTAGAACAAAGGTTGAGAAGTACCGTTATCTAGCCCTAAAATGGACACTTGCACTTCTTGTTGGTTTAGGCACAGGGCTTGTTGCCTTTTTTAACAACATTGGAGTTGAGAATATTTCTGGTACCAAGCTTCTACTTACCGAAAAGCTCATGCTCAAAAACAAGTTTCTTGAGGCCTTTGCAGTGTATGCTGGTTGTAATTTGATTTTGGCAATTGCTGCAGCAGCCCTATGTGCTTATATTGCTCCTGCAGCTGCAGGCTCAGGCATACCTGAGGTGAAGGCATACCTCAATGGGGTAGATGCTTATTCTATACTCGCTCCCAGTACCCTCTTTGTAAAGATTTTTGGCTCAATTTTTGGGGTGGCCGCGGGATTTGTGGTGGGTAAGGAAGGACCTATGGTACATACTGGCTCTTGCATTGCTAATTTACTTGGACAGGGTGGTTCAAAAAAGTGGAGAAGTGCTCTTCTGTGGCGGACTTTTTTTACAACAGCTGTAGTGGCTGTGGTATTGAGAGGCTTCATACAGTTATGTCGAGGTGGAAAATGTGGTCTTTTTGGGGAAGGAGGCTTGATAATGTTTGATGTTAGTTCAGAAATCCCTTCATACGAAATGCCTGACGTCTTGGCAGTAATGCTAATTGGAGTTATCGGAGGACTTTTGGGAAGCCTTTACAATTATCTAGTTCACAAATGCACAAAGTCCTTCATAAGACTAAGGAGAGGCCCCAAAGTCAAAATTCTACTTGTGATCATTATCAACCTCTTGACATCTTGTGCTTCATACGGCCTTCCATGGCTATCTCGATGTGTCCCTTGTCCTCCTAACTTGGGGGACAAGTGTCCCACCGGAGGTCGCTCTGGAAATTACAAAAGTTTCCAATGTCCACCAAACCATTACAATGATCTTGCTTCACTTTTTTTCTCTCCTAATGATGATACTATCCGCAACCTACTAACATCAGGTTCTATCAAGGAATTTCAGATCTCTACTCTTATAACTTTCTTTGTGGTAATATACTTCCTTGGAATTATCACCTATGGCATTGCCATTCCCTCCGGCCTCTTCATTCCTGTCATTCTTGCTGGAGCCTCATATGGGCGTCTCGCTTCTCGCCTTTTAAGTTCGTTCACTGTTCTTGATGTGGGTATGTTTGCACTCCTCGGAGCTGCATCGTTCCTTGGTGGTACGATGAGAATGACAGTTTCTATTTGTGTCATACTTCTTGAGCTCACTAATAACCTCTTGATACTCCCTTTGGTGATGCTAGTTCTACTTATATCAAAAACTGTGGCTGATAATTTTAACCAAGGTATTTATGATCAGATTGTGAAAATGAAGGGTTTGCCTTACCTAGAAGCAGTTGCAGAACCATACATGCGGCATTTAACAGCAGGAGATGTTGTTTCTGGCCCATTATTCACTTTTTCTGGAGTTGAAAAAGTGAGGAATATCGTTCATGCTTTGAGGGTAACACAACATCATGGTTTTCCTGTGATTAATGAGCCTCCGTTCTCAGAAGCTCCTCAGTTATGTGGACTGGTGTTTAGGTCTCATTTGCTTGTGCTTCTTAAACAGAGGAAGTTCACAAAGCAAAAGGTGATGACTGGATCTACTATTATGAGGAACTTCGAAGCACATGATTTTGCAAAGCCAGGTTTGGGCAAGGGAATCAAGCTAGGTGATATTCATATTGGGGAAGAGGAGATGGAAATGTACGTTGATCTTCATCCAGTCACTAACACATCTCCATACACTGTGGTGGAAACCATGTCTCTTGCAAAAGCTGCTCTTCTTTTCAGAGAGCTTGGCCTCAGACACTTGTTGGTGCTGCCAAAGACAACTGGAGTAAAATTTGGAACCAATATATTTTGCTGCAAGTTACAAAATCCAACAATTGAAAGCCTATTGAATTTTGAACCAACAAATGATCAAAGGCCTCCTATTGTTGGGATATTGACAAGGCACGATTTTATGCCAGAGCATGTTTTGGGACTCTATCCTCACTTAGACCCTCGCAGTGATTCAACCACAGGATGA 2259 0.4254 MDDRESRIRIQENMEAREPENYEKGTLREPLIVSRYRANNSSQIAIVGANVCSIESLDYEIIESDLYMQDLRSRTKVEKYRYLALKWTLALLVGLGTGLVAFFNNIGVENISGTKLLLTEKLMLKNKFLEAFAVYAGCNLILAIAAAALCAYIAPAAAGSGIPEVKAYLNGVDAYSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGSCIANLLGQGGSKKWRSALLWRTFFTTAVVAVVLRGFIQLCRGGKCGLFGEGGLIMFDVSSEIPSYEMPDVLAVMLIGVIGGLLGSLYNYLVHKCTKSFIRLRRGPKVKILLVIIINLLTSCASYGLPWLSRCVPCPPNLGDKCPTGGRSGNYKSFQCPPNHYNDLASLFFSPNDDTIRNLLTSGSIKEFQISTLITFFVVIYFLGIITYGIAIPSGLFIPVILAGASYGRLASRLLSSFTVLDVGMFALLGAASFLGGTMRMTVSICVILLELTNNLLILPLVMLVLLISKTVADNFNQGIYDQIVKMKGLPYLEAVAEPYMRHLTAGDVVSGPLFTFSGVEKVRNIVHALRVTQHHGFPVINEPPFSEAPQLCGLVFRSHLLVLLKQRKFTKQKVMTGSTIMRNFEAHDFAKPGLGKGIKLGDIHIGEEEMEMYVDLHPVTNTSPYTVVETMSLAKAALLFRELGLRHLLVLPKTTGVKFGTNIFCCKLQNPTIESLLNFEPTNDQRPPIVGILTRHDFMPEHVLGLYPHLDPRSDSTTG 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0196 752 CDD CBS_pair_voltage-gated_CLC_euk_bac 537 734 - -
Lele34g0196 752 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 225 737 - -
Lele34g0196 752 Pfam Voltage gated chloride channel 222 506 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele34g0196 752 Pfam Voltage gated chloride channel 143 218 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele34g0196 752 Gene3D Clc chloride channel 78 221 - -
Lele34g0196 752 SUPERFAMILY Clc chloride channel 65 527 IPR014743 -
Lele34g0196 752 PRINTS Chloride channel signature 424 444 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele34g0196 752 PRINTS Chloride channel signature 474 493 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele34g0196 752 PRINTS Chloride channel signature 512 526 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele34g0196 752 PRINTS Chloride channel signature 186 205 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele34g0196 752 PRINTS Chloride channel signature 456 472 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele34g0196 752 PRINTS Chloride channel signature 155 172 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele34g0196 752 SUPERFAMILY CBS-domain pair 530 686 IPR046342 -
Lele34g0196 752 Gene3D Clc chloride channel 222 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0196 Lele-ChrLele34 1645324 1650451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0196 1 745 Ion Channels AT5G49890 62.701 0.0 963