Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0187 ATGGAACTTTCTAGTCAAGAAGCAGAAATCCCAATGCCAATAAACAGTACTACATATGGTGGGGAACATGGTAATGGCCATGGGCATGAGGGGCATTGGAACATGGCCCATCAACATCATCATCTCCACCACCACCAATACCCTTCTAATGGCTCCTCCATTACACAACAACCAGCCCTTCAAGATCCTCATCAGGACCATGGACCCTACATGATGAAGAAGAAAGAGGTAAGGTACAGAGAGTGCCTTAAGAATCATGCAGCTTCCATGGGAGGTACTGCCCTTGATGGCTGTGGTGAGTTCATGCCCAGTGGAGAAGAAGGCACCATGGAGGCCTTAACCTGCTCAGCTTGCCACTGTCACAGAAATTTCCACAGAAAAGAAGTAGAAGGTGAGCCTTCTTATTACAAATTTGGAAGCAAATTCGTCTTGGGGCATCATCATCATCACAAGAGTATCTTAGCTTCCCCAGAAGCTCTTGTGGGGTACCCTACAGGCAACATTCTGCCTTCAAGAATTGTACCACCACACCAGATGATACTGCCCTACAATGTAGGGCCTGGGCCAGTTCCTTCAGAATCAGATGAGCAAGAAGATGGAGGTGGTGGATTAATGGTGGGTAGGCCAGCATCCTCATCGCAGATAGTGAAGAAGAGGTTCAGGACAAAATTCACACAGGAGCAGAAGGAGAAGATGCTGAATTTTGCAGAGAAAGTTGGGTGGAAGATTCAGAAGCAGGAAGAATCTGTTCTGCAACAGATCTGTCAAGAGATTGGAGTCAGAAGAAGAGTGCTCAAGTGTACATGGCGGCAGATAGTAGTAGAATGTTCTCTGTCTGTAACAGCATGCAGAGAAGGCAACAGCGGTGGAGAAATAACCAAGAGCTATCTTGAAGAAGCAATTTCATCCACAAATCCAAATCTTAAAATGAACAAGTTTTCATGCACAAATTAA 954 0.456 MELSSQEAEIPMPINSTTYGGEHGNGHGHEGHWNMAHQHHHLHHHQYPSNGSSITQQPALQDPHQDHGPYMMKKKEVRYRECLKNHAASMGGTALDGCGEFMPSGEEGTMEALTCSACHCHRNFHRKEVEGEPSYYKFGSKFVLGHHHHHKSILASPEALVGYPTGNILPSRIVPPHQMILPYNVGPGPVPSESDEQEDGGGGLMVGRPASSSQIVKKRFRTKFTQEQKEKMLNFAEKVGWKIQKQEESVLQQICQEIGVRRRVLKCTWRQIVVECSLSVTACREGNSGGEITKSYLEEAISSTNPNLKMNKFSCTN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0187 317 MobiDBLite consensus disorder prediction 42 63 - -
Lele34g0187 317 Gene3D - 206 271 - -
Lele34g0187 317 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 57 268 - -
Lele34g0187 317 SUPERFAMILY Homeodomain-like 210 266 IPR009057 -
Lele34g0187 317 MobiDBLite consensus disorder prediction 47 62 - -
Lele34g0187 317 MobiDBLite consensus disorder prediction 188 212 - -
Lele34g0187 317 Pfam ZF-HD protein dimerisation region 77 129 IPR006456 -
Lele34g0187 317 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 79 128 IPR006456 -
Lele34g0187 317 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 78 129 IPR006456 -
Lele34g0187 317 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 217 267 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0187 Lele-ChrLele34 1551164 1553521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0187 77 306 ZF-HD Transcription Factor Family AT2G02540 48.413 1.99e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele34g0187 ZF-HD_dimer 2.3e-29 No_clan