Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0177 ATGAGTCTCGGTCACAACCATAGTCACGACGACACCACGACAACGACCACGGCCGCAACCACCACGAAGGTCGACGATGGCCACGAGCTCGACATGGTGATGCCGGGTTTCAGATTTCACCCGACAGAAGAAGAACTAGTGGAGTTCTACCTTCGCCGTAAAGTTGAGGGAAAGCGTTTCAACGTTGAGCTCATTACTTTCCTTGATCTTTATCGCTATGACCCCTGGGAGCTTCCAGCCATGGCGGCGATTGGTGAGAAGGATTGGTACTTCTATGTGCCTAGAGATCGGAAGTATCGAAACGGGGATCGGCCGAACCGAGTAACGACGTCGGGGTACTGGAAAGCCACCGGAGCTGATAGAATCATTAGAAGTGAGAATTTCAGGTCAATTGGGCTGAAGAAAACCCTAGTTTTCTATTCTGGGAAAGCTCCCAAAGGTATCAGAACCAGTTGGATCATGAACGAGTATCGCTTACCTCATCACGACACCGAACGATACCAGAAGGCTGAGATCTCGCTGTGTCGAGTGTACAAGAGACCAGGAGTAGAAGACCATCCTTCTCTTCCTCGTTGTCTGCCAACGAGGCCATCTTCTTCCTCGCGAGCTTCTTCACACACTTCAGACAAAAGCATCAGTAAGCACAGCGAAACGTTTCATCATCATCATCATCATCCTCAGAGCAACAACAACGTAGAATTTTTGGGACAAAGTACAATGATGAATAACTGCAATCATCAGTTAGGGAAAACATCTTCAGATAATAATAACGATCAAGGTGCCTCCATAGCTCATGGGCTTTCCAAAGTACAGTGCAACAATCCCCCTCTTACTTACCCTAATTCCTCAGCTTCAACAATGGCTCCTCCATTTCCATTAATTGAGGACGAAGACTTGCTGATGCTCACTAATATGCAGCCATTGATAATGAAGCAAGCTCAAGCTTCTTCTTCCTCCTTCTTCCTCACAACACCTGGTAATAATAATCATAACAATAATTCTTCTTCAGCTTCTTCATCAAGCTTGGAGGATCTCAATAGGCTCTTGAGTTATAATCAGCTGCAACAATACTTCCACAGTAACAATGCTCCAAGCCATCATCATCAACAACAGCAACAACAGTTCTCTAATTTGCTGCTGCAACCTCAACAACCAATGGCTCTGATGACCACTTCTTCGTCGTCGACCCTACCAACTTCGCTTCCATTAACGACACCAACGACGACGAAGACGGCAACCACCACCAGGACCTTCTCTGATAAACTGTGGGAGTGGAATAATCTCATCCCTGCAGAGCCAAGTAGTAACAGAGAGTACAGCTACATGTCCTTCAAGTAA 1338 0.4641 MSLGHNHSHDDTTTTTTAATTTKVDDGHELDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKDWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRIIRSENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHDTERYQKAEISLCRVYKRPGVEDHPSLPRCLPTRPSSSSRASSHTSDKSISKHSETFHHHHHHPQSNNNVEFLGQSTMMNNCNHQLGKTSSDNNNDQGASIAHGLSKVQCNNPPLTYPNSSASTMAPPFPLIEDEDLLMLTNMQPLIMKQAQASSSSFFLTTPGNNNHNNNSSSASSSSLEDLNRLLSYNQLQQYFHSNNAPSHHHQQQQQQFSNLLLQPQQPMALMTTSSSSTLPTSLPLTTPTTTKTATTTRTFSDKLWEWNNLIPAEPSSNREYSYMSFK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0177 445 MobiDBLite consensus disorder prediction 1 24 - -
Lele34g0177 445 Pfam No apical meristem (NAM) protein 35 159 IPR003441 GO:0003677|GO:0006355
Lele34g0177 445 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 32 329 - -
Lele34g0177 445 MobiDBLite consensus disorder prediction 390 409 - -
Lele34g0177 445 MobiDBLite consensus disorder prediction 1 23 - -
Lele34g0177 445 MobiDBLite consensus disorder prediction 193 207 - -
Lele34g0177 445 ProSiteProfiles NAC domain profile. 33 180 IPR003441 GO:0003677|GO:0006355
Lele34g0177 445 SUPERFAMILY NAC domain 32 180 IPR036093 GO:0003677|GO:0006355
Lele34g0177 445 MobiDBLite consensus disorder prediction 243 262 - -
Lele34g0177 445 FunFam NAC domain-containing protein 35 42 183 - -
Lele34g0177 445 Gene3D NAC domain 42 183 IPR036093 GO:0003677|GO:0006355
Lele34g0177 445 MobiDBLite consensus disorder prediction 186 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0177 Lele-ChrLele34 1467197 1469678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0177 32 196 NAC Transcription Factor Family AT2G02450 92.727 2.72e-115 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele34g0177 NAM 5e-34 No_clan