Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0172 ATGTTTCCGAGACTAATACACCCCCATGAAAGCTTAATCGAAGATTTGGAGGCTGCTTCGAACCACAACAATCACAAGGGGGACCCATGTCTGGTTTTGACCGCCGATCCTAAACCTCGCCTCCGATGGACACAGGACCTCCATGAACGATTCGTCGATGCTGTCACCCAGCTCGGGGGTGCTAGTAAAGCTACACCGAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTCTTTCATTTGAAGAGCCATCTTCAGGTCTATTTTCACATTATTATGAAATACAGACTTGGTAAACAATCAGGGAAAGATATGGGTGAAGCATGCAAAGATGGGATGTCAGGCTCTTATCTTCTAGAAAGCCCCGGTACTGATAACAACTCTCCAAAGTTGCCGGCTTCTGACACAAATGAGGGTCATGAGATCAAAGAGGCGTTAAGAATTCAGATGGAAGTGCAAAGTAAACTTCATTTGCAAGTAGAGGCAGAGAAGCACTTGCAGATTCGCCAAGATGCAGAGCGGCAATACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCAGATCAATTCATCAGCGCGACGGTTATAGAGCCACCAGACAGCCAAAAAGTTCAAGATCATGTCGGAAGTAAAGCACCGAGAGGTTCCCTGCTTGATTCTCTAGGATTCTACTCCTTACCATCTGCCGAGGCAGCTGGAGTGCATGTCTCGGAGGAAAAAATCATGCCTAGTTTCGAGCGGCCTAGGACCGGCTGTTCCACGGAAAGTTGCCTAACATCACGTGAGAGTTCTAACGTGCTCGCTTCAGAAGGATCTCCAGATGGAGGTAAAAAGAGGATGCTGAGCTTGGACCCTATGGCCCCACCACCATTGATCTGGAGTGAAGCCAAAATGAGAGTTCAAGAGATGAATGTAGCCCAAGGTAATCTTCATGGAATAACCAGGTACTTTGATGTGAGAGAAAGAGATAATGGAATAGGTCCTACATCTTATATCTCCATTACTAAAGAATATCCGTACCTGCTCCTTAATGGACTGTTTCCAGAAATGAGAGATCCAATGGTTAGAGTTAAATTTGTGCTTATCTGGATAAATGACATGTATCAAGCAAAGCCTGTTCCTAATTCAAGTCTAGTTGGCAGCAATTTATTGGTTCATGGTCAGCATTTAGATTGTGGTGGTAATGCAATGGATCCTCTCAAGGGAGGTAGCAATCCTACCAACAACTCTTATCTCAACTCAAAGCAACGTTTACGCTGGACGCATGAGTTGCATGAACGTTTTGTTGATGCTGTGGCACAACTTGGGGGGCCAGATCGTGCCACACCTAAAGGTGTCCTCAGAAGTATGGGTGTGCAAGGCTTAACAATATATCATGTCAAAAGCCATTTACAGAAATATCGACTTGCAAAATACCTCCCTGATTCCTCGTCCGATGGGAAAAAAGATGAAAAGAAAGAAACAGGGGACATGCTTTCCAATCTAGACGGTGGTGGGATGCAAATTACTGAAGCACTGAAGCTACAGATGGAGGTGCAGAAGCGACTGCATGAGCAATTAGAGGTTCAGAGACAACTTCAACTACGGATAGAAGCCCAGGGTAAATACTTGAAGAAGATAATTGAAGAGCAGCAGCAGCTCGGTGGGGTTCTGTCAGAGTCACCATGCTCAGGTGTTGACGCTCCGGCATCGGCTGATGGGTGTCAAGAACCTGAGAATAAGACTGACCCGGCTACCCCAGCTCCAACCTCTGAGTGCCCCCTCCTAGATAAAGCAGCAAAAGAATGCGCCCCAGCAAAGAGTCTGTCTATCGATGAATCGTTGTCATCTCACCACGAACCATTGACTCCGGATTCTGGCTGCAAGGCCGGCTTACCTATTGACAGCTCAAAAGGGGAGAGACTGTCGAAGAAGCACCGCGTGAGCATGGAGGGAGCATATTGTAAATCAGAAATGATGCTTCCACATCAGATACTCGAATCAAGCATGCCATCATACCAGCAGTCAAACAATGTTTTCCTCACCGAAGAGCAGTTTGATCCTTCATTGGGTATATCTACTAGGAGTGAGGAGGCATTACAAAAGGTTGGTGGCAGCAATCTGTGA 2115 0.4638 MFPRLIHPHESLIEDLEAASNHNNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQVYFHIIMKYRLGKQSGKDMGEACKDGMSGSYLLESPGTDNNSPKLPASDTNEGHEIKEALRIQMEVQSKLHLQVEAEKHLQIRQDAERQYMAMLERACKMLADQFISATVIEPPDSQKVQDHVGSKAPRGSLLDSLGFYSLPSAEAAGVHVSEEKIMPSFERPRTGCSTESCLTSRESSNVLASEGSPDGGKKRMLSLDPMAPPPLIWSEAKMRVQEMNVAQGNLHGITRYFDVRERDNGIGPTSYISITKEYPYLLLNGLFPEMRDPMVRVKFVLIWINDMYQAKPVPNSSLVGSNLLVHGQHLDCGGNAMDPLKGGSNPTNNSYLNSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRSMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKDEKKETGDMLSNLDGGGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQQLGGVLSESPCSGVDAPASADGCQEPENKTDPATPAPTSECPLLDKAAKECAPAKSLSIDESLSSHHEPLTPDSGCKAGLPIDSSKGERLSKKHRVSMEGAYCKSEMMLPHQILESSMPSYQQSNNVFLTEEQFDPSLGISTRSEEALQKVGGSNL 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0172 704 MobiDBLite consensus disorder prediction 478 494 - -
Lele34g0172 704 Pfam Myb-like DNA-binding domain 421 471 IPR001005 -
Lele34g0172 704 Pfam MYB-CC type transfactor, LHEQLE motif 503 549 IPR025756 -
Lele34g0172 704 Pfam MYB-CC type transfactor, LHEQLE motif 143 188 IPR025756 -
Lele34g0172 704 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 416 695 IPR044848 GO:0003700
Lele34g0172 704 MobiDBLite consensus disorder prediction 607 641 - -
Lele34g0172 704 MobiDBLite consensus disorder prediction 252 273 - -
Lele34g0172 704 SUPERFAMILY Homeodomain-like 416 472 IPR009057 -
Lele34g0172 704 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 415 475 IPR017930 -
Lele34g0172 704 MobiDBLite consensus disorder prediction 119 138 - -
Lele34g0172 704 Gene3D - 417 476 - -
Lele34g0172 704 Gene3D - 37 102 - -
Lele34g0172 704 MobiDBLite consensus disorder prediction 250 283 - -
Lele34g0172 704 MobiDBLite consensus disorder prediction 121 136 - -
Lele34g0172 704 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
Lele34g0172 704 Coils Coil 506 526 - -
Lele34g0172 704 MobiDBLite consensus disorder prediction 477 499 - -
Lele34g0172 704 FunFam Myb family transcription factor 417 475 - -
Lele34g0172 704 MobiDBLite consensus disorder prediction 554 589 - -
Lele34g0172 704 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 418 473 IPR006447 GO:0003677
Lele34g0172 704 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 38 92 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0172 Lele-ChrLele34 1384136 1396842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0172 453 704 G2-like Transcription Factor Family AT2G01060 64.961 8.31e-95 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele34g0172 Myb_DNA-binding 8.2e-08 CL0123