Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0135 ATGAGACTCTCTTCAGCTGGTTTTACTCCTTCACCCCAAGAAGGAGAAAAGCGAGTTCTAGATTCTGAGCTTTGGCATGCTTGTGCTGGCCCTCTTGTTTCCCTGCCAGCTGTTGGAAGCCGCGTTGTCTACTTCCCCCAGGGTCACAGTGAACAGGTTGCTGCATCAACTAACAAGGAGGTGGATGTTCATATTCCCAACTACCCAAGCTTACCTCCCCAACTTATTTGTCAACTTCATAATATGACTATGCATGCTGATGCGGAGACGGATGAAGTATACGCTCAGATGACCTTGCAACCTCTGAATCCTCAAGAACAAAAGGAGGCATACCTTCCAGCAGAGTTGGGCACTTCCAGTAAACAGCCAACGAACTACTTCTGCAAAACTTTGACTGCTAGTGACACGAGCACTCATGGGGGATTCTCTGTTCCTCGTCGGGCAGCTGAGAAAGTGTTTCCTCCTCTGGATTTCTCTCAGCAGCCTCCTGCTCAAGAATTGATTGCACGGGACTTGCATGGTAACGAATGGAAATTTAGACATATCTTCCGGGGCCAGCCTAAACGACATCTACTTACAACAGGATGGAGTGTCTTTGTTAGTGCTAAAAGGCTTGTTGCTGGTGATTCTGTGCTGTTTATTTGGAATGACAAGAATCAATTGCTTCTTGGTATTCGACATGCAAATCGACCACAAACAGTGATGCCATCATCAGTGCTCTCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCGCATGCAGCTGCAACAAACAGTCGTTTCAACATTTTCTACAACCCACGTGCTAGCCCATCAGAATTTGTCATACCCCTAGCAAAGTATGTTAAAGCTGTGTATCATACCCGAGTTTCAGTGGGCATGCGCTTCCGGATGTTGTTTGAAACAGAGGAATCAAGTGTCCGGCGATACATGGGCACAATCACTGGCGTTAGTGACCTGGATCCTGTGAGGTGGCCAAATTCGTGTTGGCGATCAGTTAAGGTTGGCTGGGATGAGTCCACAGCAGGAGATAGGCAACCTAGAGTGTCCTTGTGGGAAATTGAGCCATTAACAACATTTCCAATGTATCCTTCCCCATTCCCTCTTAGGCTTAAACGACCATGGCCTACTGGACTTTCTTCATTCCATGGTATGAAGAATGATGATTTGGGTATGAATTCTACACTGTTCTTGGATAGAGGACTTCAGTCTCTTAATTTTCCTGGAATGGGGGTTACTCCTTGGATGCAACCGAGGTTTGATCCCTCCTTTCTGAATTTGCAAACTGACGTGTACCAAGCCATGGCCCCTGCTGCGCTTCAGGATATAAGGACTATAGATCCTTCCAAACAGCATGCAACATCCCTGCTTCAATTTCAGCAACCACAGAACTTCCCCAACAGGACTGCTGCTTTAGTGCAGGCCCAGATGATGCAGCAGTCTCAAACTCAGCAAGTTTTTCAAAATAATCAAGAGAATATGCATCCATCTCAATATGAGGCTCTAAGTCAGACTCATCTTCAGCATCAAAACTCTTTTGTTAATCAGCATCACCAGCAGCATCAGCCACAACATCAACAGCAACAGCAACAGCAAAGTTTTTCTGATCAGCAGATTTCAAGTACTGTCTCTACCATGTCTCAGTTTGTTTCAGCAGCTCAACCGCTGTCAACACCAACGCAAGCTATTTCTTCGTTGTGCCATCAGCAAAGCTTTTCTGATTCAAATGGGAACAGTGTAACTACTGCTGCAATGGTTTCTCCCCTGCATAGTATTTTGGGTCCATTTCCCCAAGAAGAAACTTCCCACCTTCTCAATATTCCTAGGACAAGCTCTTGGCTACCTGTTCAACCTTCTACTACTACTGCTACTTGGCCTTCCAAGCGTGTTGCCGTGGACCCTCTTCTTTCTTCCGGAGCTTCTCAATGTGATCTGCCTCACATGGATCAGTTAGGGCAGCGCCAGAATACATTGTCTCTAAATGCAGTTACTTTGCCACCCTTTCCCGGAAGGGAGTGCTCCATTGATCAAGAAGGGAGCACTGATCCACAAAACCATCTTTTATTCGGTGTTAATATAGAGCCCTCATCTCTTCTAGTGCAGAACGGGATGTCAGGCCTTAAGGGGGTTAGCAGCAACGTTGATTCGACAACCATACCTTTTCAGTCTTCTAATTACCTGAATACTACAGGCACTGAATCTACGTTGAATCTTGCAATGTCACAAACCATTGGTGAATCAGGATTCCTGCAGGCCCCAGAAAATATGGGCCAAGGAAATTCTCCTAATAAAACCTTTGTAAAGGTTTACAAGTCAGGGTCCTTCGGAAGATCGTTGGATATCACTAAATTCAGCAGCTACCATGAGCTGCGGCGTGAACTCGCATGTATGTTTGGCCTTGAAGGCGAGTTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGATGTTCTTCTCCTTGGTGATGGCCCTTGGCCGGAATTCGTCAACAGTGTATGGTGTATCAAGATACTTTCCCCACAAGAAGTGCAACAAATGGGCAATAATGGCCTCGAGCTTCTGAATTCGGTTCCGATTCAAAGACTTTCCAACGGCACATGTGAAGACTTTGTGAGCCGACAGGACCCGAGAAGTTTAAGCTCTGGGATCACAACTGTGGGGTCTCTAGACTACTAA 2700 0.463 MRLSSAGFTPSPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDVHIPNYPSLPPQLICQLHNMTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTSSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRHANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFNIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGVSDLDPVRWPNSCWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLSSFHGMKNDDLGMNSTLFLDRGLQSLNFPGMGVTPWMQPRFDPSFLNLQTDVYQAMAPAALQDIRTIDPSKQHATSLLQFQQPQNFPNRTAALVQAQMMQQSQTQQVFQNNQENMHPSQYEALSQTHLQHQNSFVNQHHQQHQPQHQQQQQQQSFSDQQISSTVSTMSQFVSAAQPLSTPTQAISSLCHQQSFSDSNGNSVTTAAMVSPLHSILGPFPQEETSHLLNIPRTSSWLPVQPSTTTATWPSKRVAVDPLLSSGASQCDLPHMDQLGQRQNTLSLNAVTLPPFPGRECSIDQEGSTDPQNHLLFGVNIEPSSLLVQNGMSGLKGVSSNVDSTTIPFQSSNYLNTTGTESTLNLAMSQTIGESGFLQAPENMGQGNSPNKTFVKVYKSGSFGRSLDITKFSSYHELRRELACMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNNGLELLNSVPIQRLSNGTCEDFVSRQDPRSLSSGITTVGSLDY 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0135 899 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 855 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele34g0135 899 Gene3D - 291 363 - -
Lele34g0135 899 FunFam Auxin response factor 291 363 - -
Lele34g0135 899 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele34g0135 899 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Lele34g0135 899 SUPERFAMILY CAD & PB1 domains 758 841 - -
Lele34g0135 899 FunFam Auxin response factor 125 229 - -
Lele34g0135 899 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Lele34g0135 899 FunFam Auxin response factor 761 855 - -
Lele34g0135 899 Pfam AUX/IAA family 756 851 IPR033389 -
Lele34g0135 899 ProSiteProfiles PB1 domain profile. 766 850 IPR000270 GO:0005515
Lele34g0135 899 MobiDBLite consensus disorder prediction 515 540 - -
Lele34g0135 899 CDD B3_DNA 126 219 IPR003340 GO:0003677
Lele34g0135 899 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Lele34g0135 899 Gene3D - 125 228 IPR015300 -
Lele34g0135 899 SMART B3_2 127 229 IPR003340 GO:0003677
Lele34g0135 899 Gene3D - 762 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0135 Lele-ChrLele34 1079665 1084571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0135 1 479 B3 DNA Binding Superfamily AT1G30330 86.364 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele34g0135 AUX_IAA 9.2e-07 CL0072