Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0107 ATGGCTGAATCTCCCTCTCCCTCTCCCTCCTCCATGACCACCACCTCCACCACTCTCCACCATCCCTCCGCCTTCGATCTCACCGTCCTCGTCGCCGCCATTGTCTGCGCCTTCCTCTGCGCCCTCGGCCTCAACACCATGCTCCACTGCGTCTTCCAATGCGCCGTCACTGAACCGCTTCAGTGGATCGCCTCTCGCCGAATCAATTCCGGCCTCAAGAAGAAAGACATGGTCGCTCTTCCTACTTCCACTTATTACGCCAACACTACTTCGTCGTCGTCTTCTTCTTCTGATTCTAATTCTAATTCTTCTACTGCAACTTCTGCTTCTAATTGTGCGATTTGCCTGGCGGATTTCAGAGATGGGGAAAGAATTAGGTTTCTCCCAAAGTGCAGTCACACATTCCACGTTGCCTGTATCGATAAGTGGTTGCTTTCTCATTCATCTTGCCCAACTTGCCGCCATTTTCTGAAATCCTCCACCGAGTCACTTAACAACACTCTGCATCTTATTGAGGTCGGGGAGGAGTGCTTTGTTAGCGATCTTAATTAG 552 0.5091 MAESPSPSPSSMTTTSTTLHHPSAFDLTVLVAAIVCAFLCALGLNTMLHCVFQCAVTEPLQWIASRRINSGLKKKDMVALPTSTYYANTTSSSSSSSDSNSNSSTATSASNCAICLADFRDGERIRFLPKCSHTFHVACIDKWLLSHSSCPTCRHFLKSSTESLNNTLHLIEVGEECFVSDLN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0107 183 SUPERFAMILY RING/U-box 111 162 - -
Lele34g0107 183 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 21 158 - -
Lele34g0107 183 MobiDBLite consensus disorder prediction 88 107 - -
Lele34g0107 183 SMART ring_2 112 153 IPR001841 -
Lele34g0107 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 159 IPR013083 -
Lele34g0107 183 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
Lele34g0107 183 Pfam Ring finger domain 111 154 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0107 Lele-ChrLele34 865817 866474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0107 4 157 C3H Transcription Factor Family AT2G17450 39.610 9.82e-34 116