Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0067 ATGGAAGCCAGTGATGGAAATAGAGAGCAGATTGTTGATGTTCGGTCGGTGGTTGAAGCTGTTTCTGCCGAAGAAGGAGATGTCCCTGTGTACCAGGTTGAAAGCTTGTGCATGCGCTGCGGTGAAAACGGGACGACAAGATTTTTACTGACTTTAATTCCGCACTTCAGAAAGATTTTGTTGTCAGCTTTTGATTGTCCTCATTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGAGAAATCCAACCACGTGGTTGCTGCTACAGTTTGGAGATCCCACCAGGCAATCCGAAGATGCTCGATCGACAAGTGGTAAAATCAGAATCTGCTACTATTAAGATACCAGAGTTGGATTTTGAGATTCCTCCTGAGGCTCAACGTGGAACCCTGTCAACGGTGGAAGGTATACTCGTACGAGCTGCTGATGAACTTCAGGCCCTTCAAGATGAGCGCAAAAAAGTTGACCCACAGACAGCTGAAGCAATTGACCAGTTCCTGATGAAATTGAGAGCTTGCAAGGCTGGAGAGCTTTCATTCACATTTATTCTTGATGACCCTGCTGGAAACAGCTTCATTGAAAATCCGTATGCTCCATCATCTGATCCATCATTGAGTATCAAATTCTATGAGCGTACTCCTGAGCAGCAAGCATCATTAGGATATCTCGTTGACTCATCACAAATTGAAGGGGGTCGTGATGTAGCATCAGCAGTGGAAGAAGCTGGGGTTGCTGATCAAGGGAGGAGAGAACCACATGGGTCAATAGGGGCAGCTGCTGGTCATCGAGCCATTGCACAGAGTAATAGTGCTGAAATTGCAGAAGCCTTATTTAGATATACTGCACCGGAAGAGGTGATGACTTTCCCATCAACTTGTGGTGCTTGTACTACTAGGTGCGAGACTCGAATGTTCGTCACTAAAATTCCATATTTCCAGGAAGTTATTGTTATGGCATCCACGTGTGATGCTTGTGGTTACCGTAACTCTGAGTTAAAACCTGGTGGGCGAATTCCTGATAAAGGAAAGAAGATTACACTTTCCGTTAAAAATGTTAAAGATCTAAGCCGTGATGTAATAAAGTCTGATACTGCTAGTGTGGAAGTTCCTGAACTCGACTTGGAGCTAGCAAGTGGCACTCTAGGAGGAATTGTTACGACTGTTGAAGGTCTAATCACAAAAATTAGTGAAAGCCTTGAGAGGGTGCATGGGTTTACTTTTGGAGATAGTCTTGACGAAAATAGAAAAAGCAAATGGCTAGAGTTTAGAGCAAGGCTAAAAAAGCTTCTTAGCTTGGAACAACCGTGGACTTTAATTCTTGATGATGCATTATCCAATTCGTTCATAGCGCCAGCGACCGATGATCTAAAAGACCTAAAAGACGATGACCAATTAACATTAGAGGAATACGAGAGGTCATGGGAACAAAATGAAGCACTGGGTCTGAATGATATTGACACCTCTTCTGCCGATGTAGCTTATGAAGCAGCAAATGATGCCAAAACTGAGTGA 1512 0.4378 MEASDGNREQIVDVRSVVEAVSAEEGDVPVYQVESLCMRCGENGTTRFLLTLIPHFRKILLSAFDCPHCGERNNEVQFAGEIQPRGCCYSLEIPPGNPKMLDRQVVKSESATIKIPELDFEIPPEAQRGTLSTVEGILVRAADELQALQDERKKVDPQTAEAIDQFLMKLRACKAGELSFTFILDDPAGNSFIENPYAPSSDPSLSIKFYERTPEQQASLGYLVDSSQIEGGRDVASAVEEAGVADQGRREPHGSIGAAAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACTTRCETRMFVTKIPYFQEVIVMASTCDACGYRNSELKPGGRIPDKGKKITLSVKNVKDLSRDVIKSDTASVEVPELDLELASGTLGGIVTTVEGLITKISESLERVHGFTFGDSLDENRKSKWLEFRARLKKLLSLEQPWTLILDDALSNSFIAPATDDLKDLKDDDQLTLEEYERSWEQNEALGLNDIDTSSADVAYEAANDAKTE 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0067 503 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 292 486 IPR004457 GO:0008270
Lele34g0067 503 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 37 219 IPR004457 GO:0008270
Lele34g0067 503 Coils Coil 131 151 - -
Lele34g0067 503 FunFam Zinc finger protein ZPR1 337 482 - -
Lele34g0067 503 Pfam ZPR1 zinc-finger domain 291 449 IPR004457 GO:0008270
Lele34g0067 503 Pfam ZPR1 zinc-finger domain 35 194 IPR004457 GO:0008270
Lele34g0067 503 FunFam Zinc finger protein ZPR1 282 336 - -
Lele34g0067 503 FunFam zinc finger protein ZPR1 81 222 - -
Lele34g0067 503 PANTHER ZINC FINGER PROTEIN ZPR1 13 496 IPR040141 -
Lele34g0067 503 SMART zpr1 291 451 IPR004457 GO:0008270
Lele34g0067 503 SMART zpr1 35 195 IPR004457 GO:0008270
Lele34g0067 503 FunFam Zinc finger protein ZPR1 25 80 - -
Lele34g0067 503 Gene3D ZPR1, A/B domain 337 482 IPR042451 -
Lele34g0067 503 Gene3D ZPR1, A/B domain 81 222 IPR042451 -
Lele34g0067 503 Gene3D ZPR1, zinc finger domain 281 336 IPR042452 -
Lele34g0067 503 Gene3D ZPR1, zinc finger domain 27 80 IPR042452 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0067 Lele-ChrLele34 518010 524217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0067 5 501 C2H2 Transcription Factor Family AT5G22480 76.200 0.0 778