Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele34g0064 | ATGGAGGATCACGCGGGTTTAGGAGGTGGAGCATCTGTTAACATCGGAAGGGAAGAAGAAGATGATGATGAATTTTGCAGTTGTTGTGAAGATGAAGAAGAAGAATTATGGAAAGAATCTGAGCAGTCGGTGGTGGAAAAGTTGAAGGAGGACTGTGATGAATCTTCCGTAAAAATGTTCTTTAAGGGCTTGTCTATAGCTGGGGTTGAAAATTCCACTTCTGGGTATTCTGGAATTGGAGTGGTCATGGAAAGACCATCTGGTCTTCCAGCTATCCAGGTGCAGAAAAAACTCGATTTTTATGCAGAAAAGCTATTAGCTGAATACTTGGCTCTCATCGATGGCTTGCTGGAAGCTATGCGGAATAACATCCACCGGGTTTACGCTTTTACAGATTCTGAGTTATTGTACGATCAGGTAACATTTGAGAAGAATCTTGAGATGCCACTTTTGATAGCACTGAGAGAAAGGGTTCTGGAGCATGCCAATAATTTTGAATCATTTGTTCTTAATCTTGTGCCTAGCATTGATCTTGAGAAACCGCTGCAATTAGCTAAAGTATCTATTGGCCTTGTCTCTCTTCCTATAGATGGCGGGAAAGTGCTTGAAAGCTGTTCTATTTGTTGTAAGAACAAGCCATTGCCAATAATGATCACCATGAAATGTTCGCACAAGTTTTGTTCACATTGTTTGAGGGCTTATGTTGATGGAAAGGTACAGTCTTGTCAAGTCCCTATAAGATGCCCTCAACCAAGATGCAAATATTACATCTCAACTGCAAAATGCAGGTCTTTTCTTCCATTTACCTCTTTTGAGTCTTTGGAGAAAGCCCTTGCAGAAGCAGATGTTTCAGAAAGAATTTACTGCCCATTTCCAAATTGTTCTGTTCTCCTTGATCCCCGTGAATGTTTATCAGCTAGGGCTAGTTCATCTAGCCAATCGGACAATTCTTGCGTTGAGTGTCCTGTTTGTCAGAGGTTTATATGTGTGGACTGTGAGGTTCCTTGGCATTCTTCTATGAGTTGTGAAGAGTATCAGAATTTACCTGAGGAGGAGAGAGATGCTTCTGACGTTACCTTGCATCGCCTAGCTCAAAATAAACGATGGAAGCATTGTCAGCAGTGTCATCGGATGATTGAGCTTACTCAAGGTTGTTATCACATGACATGCTGGTGTGGTCATGAGTTCTGCTATTCTTGTGGAGCGGAATGCAGGGATGGCCAACAGACGTGTCAGTGTGTGTTTTGGGATGAAGACAACTCTGAAGACTCAGTGACCCACTCTCTTCAAGAATCAGAACAATGGGCATGGGAGACTTTCAATTCTCTCCCCATGATCATGGATGCATACTCAGACCAAGAACGTTCCCAGCTTGCACTTATACAACGATTCCTCGACGGGGGTTTCAGTCTGAGTGACCATCATCCTTACCAATCCCCTCCCCGTTGTACAGACTCCTATGTTGATGCCATGAAGGATCTACGTCAGCTTCCGTGGCTCGAGCGATTTGTCTCCGTGATAAGTGACAACTACTATGAAGACTATATTCAGTGA | 1554 | 0.4311 | MEDHAGLGGGASVNIGREEEDDDEFCSCCEDEEEELWKESEQSVVEKLKEDCDESSVKMFFKGLSIAGVENSTSGYSGIGVVMERPSGLPAIQVQKKLDFYAEKLLAEYLALIDGLLEAMRNNIHRVYAFTDSELLYDQVTFEKNLEMPLLIALRERVLEHANNFESFVLNLVPSIDLEKPLQLAKVSIGLVSLPIDGGKVLESCSICCKNKPLPIMITMKCSHKFCSHCLRAYVDGKVQSCQVPIRCPQPRCKYYISTAKCRSFLPFTSFESLEKALAEADVSERIYCPFPNCSVLLDPRECLSARASSSSQSDNSCVECPVCQRFICVDCEVPWHSSMSCEEYQNLPEEERDASDVTLHRLAQNKRWKHCQQCHRMIELTQGCYHMTCWCGHEFCYSCGAECRDGQQTCQCVFWDEDNSEDSVTHSLQESEQWAWETFNSLPMIMDAYSDQERSQLALIQRFLDGGFSLSDHHPYQSPPRCTDSYVDAMKDLRQLPWLERFVSVISDNYYEDYIQ | 517 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele34g0064 | 517 | SUPERFAMILY | RING/U-box | 203 | 281 | - | - | |
Lele34g0064 | 517 | ProSiteProfiles | Zinc finger RING-type profile. | 205 | 252 | IPR001841 | - | |
Lele34g0064 | 517 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Lele34g0064 | 517 | Gene3D | - | 57 | 189 | IPR036397 | GO:0003676 | |
Lele34g0064 | 517 | SMART | ibrneu5 | 352 | 411 | IPR002867 | - | |
Lele34g0064 | 517 | SMART | ibrneu5 | 272 | 342 | IPR002867 | - | |
Lele34g0064 | 517 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 58 | 431 | IPR031127 | GO:0004842|GO:0016567 | |
Lele34g0064 | 517 | FunFam | RBR-type E3 ubiquitin transferase | 200 | 285 | - | - | |
Lele34g0064 | 517 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 202 | 284 | IPR013083 | - | |
Lele34g0064 | 517 | FunFam | RBR-type E3 ubiquitin transferase | 57 | 192 | - | - | |
Lele34g0064 | 517 | Gene3D | - | 339 | 463 | - | - | |
Lele34g0064 | 517 | SUPERFAMILY | Ribonuclease H-like | 73 | 174 | IPR012337 | - | |
Lele34g0064 | 517 | ProSiteProfiles | TRIAD supradomain profile. | 201 | 417 | IPR044066 | - | |
Lele34g0064 | 517 | Pfam | Reverse transcriptase-like | 68 | 174 | IPR002156 | GO:0003676|GO:0004523 | |
Lele34g0064 | 517 | FunFam | RBR-type E3 ubiquitin transferase | 340 | 465 | - | - | |
Lele34g0064 | 517 | Pfam | IBR domain, a half RING-finger domain | 283 | 342 | IPR002867 | - | |
Lele34g0064 | 517 | ProSitePatterns | Zinc finger RING-type signature. | 222 | 231 | IPR017907 | - | |
Lele34g0064 | 517 | SUPERFAMILY | RING/U-box | 355 | 419 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele34g0064 | Lele-ChrLele34 | 487041 | 490568 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele34g0064 | 56 | 402 | C3H Transcription Factor Family | AT2G19610 | 27.348 | 2.72e-29 | 117 |