Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0061 ATGCCAGTCTTGGATTTTCTATATGAGCGTATTCCTGGTTTTAGATTGGCAGAATTTGGACATTTCTGGAGTAGTGTTAAGACGGAATTGATTGGGTTGAAGATAAATGTGACGCACCGAAGAACCAGACAGAAGTTCACCATTCTAGGGCTATCAAAAGGACGCATTATTGAGCCACCGAGATTGAAAGTAGGTGGTCGAAATGGCCAGATTATGAATGTAGAATTGGATCCGGAGAGATGTCAATGGAACCTAGTTGGACAATCTGTGATGAAAGGCAAGCCAGTTGAGCATTGGGGCACTATTGATTTTACAAGCACAGAGTCAGATTCCTGGTTCAGATTAAGAGATGAGGAATTCATTCCTAAGCTCAAGGACAAATTTCAAAGTTTGGGTATTGGCATGAATGATCCTCTTTGTGTTGAACGATCTTCGATGAAGCAACTTGCAAGGAATGATCAGAATCTTACAAATCTTGCTCTCAAGATCAATGCCAAACTTGGAGGTAGTAATGTTGAGCTTGAGAATGGGCTCCCTTGCTTTGCAGGTGATGGGCATGTTATGTTTATTGGGGCAGATGTCAATCATCCTGCTGCCCAAGACGTTAATAGTCTGTCGATTGCTGCGGTGGTTGGAACTGTCAATTGGCCTGCCGCGGCACGTGTTAGCCCTCAATCCCATCGGAAAGAACAGATATTGAACTTTGGAACAATTTGCCTTGAGCTTGTTAACTGTTACAAAAAGGGGAACCAAGTGAGACCAGATAAAGTTGTTATTTTCCACGATGGGGTGAGCGAGGCACAGAAGCTACATCAGACTCGATTGTTTCCAGAGGAGCCTTCTGCTGGAAAAGCGTCTCCTGGAACAGTGGTGGACACAAAAGTGGTACACCCTTTTGAGTTTGACTTCTACCTTTGCTCTCACTATGGAAGCTTAGGGACAAGCAAGCCCACCCACTATCATGTTTTGTGGGATGAGCACAGGTTTACCTCTGATGACTTACAGAAGCTCATATATGATATGTGCTTTACCTTTGCAAGGTGCACTAAACCTGTATCTTTGGTCCCTCCGGTGTACTATGCCGACCTTGTTGCCTATCGAAGGCGGCTATACTATGAGGCAAACACCAAGTTGGAGAGCTCGAAGCCGGCATTGTTTCCTCCTTCATCCGCAAATGAAAACAGGTATTTCAAGCTGCACGAGCACTTGCAAGACATGATGTTCTTTGTCCACGGCACCTCCAGTATGAACTCGTGTTTGGGTCTCATGGCATCTGCTGGTTGCAGTGCTGATTTGAGTTGGTGCGTGAATCTAATGGGTCACGAGACATGA 1332 0.4505 MPVLDFLYERIPGFRLAEFGHFWSSVKTELIGLKINVTHRRTRQKFTILGLSKGRIIEPPRLKVGGRNGQIMNVELDPERCQWNLVGQSVMKGKPVEHWGTIDFTSTESDSWFRLRDEEFIPKLKDKFQSLGIGMNDPLCVERSSMKQLARNDQNLTNLALKINAKLGGSNVELENGLPCFAGDGHVMFIGADVNHPAAQDVNSLSIAAVVGTVNWPAAARVSPQSHRKEQILNFGTICLELVNCYKKGNQVRPDKVVIFHDGVSEAQKLHQTRLFPEEPSAGKASPGTVVDTKVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHRFTSDDLQKLIYDMCFTFARCTKPVSLVPPVYYADLVAYRRRLYYEANTKLESSKPALFPPSSANENRYFKLHEHLQDMMFFVHGTSSMNSCLGLMASAGCSADLSWCVNLMGHET 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0061 443 Gene3D - 56 143 - -
Lele34g0061 443 Gene3D - 269 410 IPR036397 GO:0003676
Lele34g0061 443 Gene3D - 144 177 - -
Lele34g0061 443 ProSiteProfiles Piwi domain profile. 151 373 IPR003165 GO:0003676
Lele34g0061 443 SUPERFAMILY Ribonuclease H-like 154 373 IPR012337 -
Lele34g0061 443 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 53 150 - -
Lele34g0061 443 Pfam Piwi domain 267 370 IPR003165 GO:0003676
Lele34g0061 443 SMART Piwi_a_2 120 373 IPR003165 GO:0003676
Lele34g0061 443 Gene3D - 181 268 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0061 Lele-ChrLele34 459515 466945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0061 154 384 Eukaryotic Initiation Factors Gene Family AT5G43810 37.801 4.90e-56 198