Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0050 ATGGGGTCCAGAATGCGCAAGCTTAAACACTCATTCGCCTCTCTCTTGCCATCTTCCTCCAAATCCGATTCCTCGTCTCGGCTTCCTTCCGACACTGTGACCGATTCCTGCAATGACCCGCAACTGCCGCCGCCACCGCAGCCTTATCGCCGGTCCGTTTCCAACGCCGACATCAGCTCCTCCAGCTCAGTGTTGTCTCGATCCTCTTCTTCGATTTCCCGCCTCTCTCGCGCTCTCAGCATGCGATCCACCAAGAAGACTTGCACCATTTGCTTAGGTGACTTGAAGATCGGGCAAGGCCGAGCCATCTTTGTTGCTGAGTGTACCCATTCCTTCCATTTCAACTGTATTGCTTCCAATGTCAGGCATGGAAGCCATGTCTGCCCCATCTGTCGTGCCAAATGGAAAGAAATCCCATATCAAGCTCCAAGCAATTTCCCCCCTCCTCCTCCTCCTCTCCGGGTCAGGAACAGGCTCAGACCATTGACTTCTTCACCGCCTCCTCGATTAGATCCCTCAGCTATCGTCGAGCCTCTTTGCTTCTCTGATGATGAGCCACTCCCTGTTTCAGCTGCCTCCGCAGAAGAACATGTTTCATCTGCAGCTTATTTTGTAGCTATCAAGTCCTTTGCTGAGTATCCTGTTCTCTCTGCATCTGAAGCTCATCCAGATTTTGCTGTTCTTGCCAACATCCGTGCACCGGCACTTTCTCAACGTGATCATGCACCTGTGGACCTTGTTACAGTGCTTGACATCAGTGACAGCATGGCTGGTTCAAAGCTAACACTTCTCAAACAGGCTGTTCTTTTTATCATTCAGAATTTGGGTGCTTCTGACAGACTTTCTATAGTTGTTTTCTCCTCCACCGCTCTCAGGATTTTCCCACTTCGTAGGATGACTAATAGTGGCCAATCTGATGCAACCGTTGCTGTCAATTCTCTTTCAACAGATGGCGGAACTGACATTCTGAGTGGCCTAAAAAAAGGAGTTCGCGTACTCGAGGAACGGCGAGACCGAAACCCGGTTGCCAGCATTATGCTCCTCTCTGATGGCAGGTCTCAACCTTTTATAATCCCACCGTTAGGACCCCAATTGCCTGCTTCCATCACCTCCAATAATCATAATTCAAATGGGGATTCTATTCCTGTCCACACTTTTGGCTTTGGTAGGGATCATGATTCCACTGCCTTGCACTCCATCTCTGATGCATCTGGTGGCACCTTTTCCTTCATTGAATCTGTTGGCATGGTGCAAGATGCTTTTGCAAGGTGCATTGGGGGTCTACTCAGTGTTGTGGCTCAGGAGGTACAACTCATTTTCAAAACAATATCACCAGGCCTACAAATCAGTTCAGTACGCTCAGGGAGATACAGCAATGAAATTCGCGATTCGGGTAGGCGATGTGTCATCGATGTCGGTAACATGTATGCAGAAGAGGAAAAGGGATTTCTGTTGTACCTATCAATTCCTGCAATCCCAGCCATTGAAAGGGACAACAACATGGAGACACAGACTCCGTTACTGAAAATTACATGCCAATACAAAGACTCAACCTCTGAGGAAGAGCTAGTTAAGGTTGACGGTGAGAGAGTAGGCATTCGAAGATCAAACAGTTCACCAGATCCTAATGAAATGACGGTGTCCCTCGAGGTTGATAGACATAAAAATAGACTCATGGTGGCTGATGGGATCGTCGAAGCACAAAGGCTGGCCGAGAGAGGAGACCTGCGAGGCGCGAAAGCTTTGCTGGAAGCAAAAAGATCAATACTATTGTCATCAGCCTCAGCATCAGCAGGGGATCTTACTTGCACTTGGCTTGATGCAGAACTGAGAGAAACTAAGGAGAGAATGGAAACAAGCGAAAGATATGAACATACAGGAAGGGCTTATGTTCTGTCTGGTTTAAGCTCACATTCATGGCAGAGGTCTACAACAAGAGGAGACTCTTTAACTCAGTCATTTGTCAGTGGCCATGTCCGAGACCCTTCGATAAGCGGGTCGATCGGCTATGACACTCCTTCAATGGTTAACATGGTGAGAATGTCACAGAATCTTAGTCTGAGTGGATCTTGGCCTCTCCCTGAACCTTGA 2091 0.4825 MGSRMRKLKHSFASLLPSSSKSDSSSRLPSDTVTDSCNDPQLPPPPQPYRRSVSNADISSSSSVLSRSSSSISRLSRALSMRSTKKTCTICLGDLKIGQGRAIFVAECTHSFHFNCIASNVRHGSHVCPICRAKWKEIPYQAPSNFPPPPPPLRVRNRLRPLTSSPPPRLDPSAIVEPLCFSDDEPLPVSAASAEEHVSSAAYFVAIKSFAEYPVLSASEAHPDFAVLANIRAPALSQRDHAPVDLVTVLDISDSMAGSKLTLLKQAVLFIIQNLGASDRLSIVVFSSTALRIFPLRRMTNSGQSDATVAVNSLSTDGGTDILSGLKKGVRVLEERRDRNPVASIMLLSDGRSQPFIIPPLGPQLPASITSNNHNSNGDSIPVHTFGFGRDHDSTALHSISDASGGTFSFIESVGMVQDAFARCIGGLLSVVAQEVQLIFKTISPGLQISSVRSGRYSNEIRDSGRRCVIDVGNMYAEEEKGFLLYLSIPAIPAIERDNNMETQTPLLKITCQYKDSTSEEELVKVDGERVGIRRSNSSPDPNEMTVSLEVDRHKNRLMVADGIVEAQRLAERGDLRGAKALLEAKRSILLSSASASAGDLTCTWLDAELRETKERMETSERYEHTGRAYVLSGLSSHSWQRSTTRGDSLTQSFVSGHVRDPSISGSIGYDTPSMVNMVRMSQNLSLSGSWPLPEP 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0050 696 MobiDBLite consensus disorder prediction 1 62 - -
Lele34g0050 696 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 137 IPR013083 -
Lele34g0050 696 SUPERFAMILY vWA-like 241 425 IPR036465 -
Lele34g0050 696 Gene3D von Willebrand factor, type A domain 245 426 IPR036465 -
Lele34g0050 696 ProSiteProfiles Zinc finger RING-type profile. 88 132 IPR001841 -
Lele34g0050 696 SUPERFAMILY RING/U-box 81 140 - -
Lele34g0050 696 SMART ring_2 88 131 IPR001841 -
Lele34g0050 696 ProSiteProfiles VWFA domain profile. 245 432 IPR002035 -
Lele34g0050 696 CDD RING-H2 88 132 - -
Lele34g0050 696 Pfam RING-like zinc finger 88 117 IPR001841 -
Lele34g0050 696 Pfam von Willebrand factor type A domain 245 419 IPR002035 -
Lele34g0050 696 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 86 684 - -
Lele34g0050 696 Pfam VWA / Hh protein intein-like 602 683 IPR032838 -
Lele34g0050 696 SMART VWA_4 243 423 IPR002035 -
Lele34g0050 696 MobiDBLite consensus disorder prediction 13 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0050 Lele-ChrLele34 400724 403867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0050 88 137 C3H Transcription Factor Family AT1G74410 46.154 8.00e-06 45.8