Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0041 ATGGCACTTTCTATGCACAAAGATTCACCCAGCAAGCAGCAGATGGACTCCAGCAAGTACGTGAGGTATACTCCTGAGCAGGTTGAGGCTTTGGAGAGGGTTTATGCAGAATGCCCAAAACCTAGTTCTCTGAGAAGACAACAGCTCATTAGAGAGTGTCCTATACTTTCTAATATTGAGCCCAAACAGATCAAAGTTTGGTTTCAGAACCGCAGATGTCGTGAAAAGCAGAGGAAGGAATCTTCACGGCTGCAGACAGTAAACAGGAAGCTTACTGCGATGAACAAGTTGTTAATGGAAGAGAATGATCGACTGCAGAAGCAGGTGTCTCATTTGGTCTATGAAAATGGATACATGAAACAACAGATACATACTGCATCTGCTACTACTACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAAAAACAACAGCACAACCCAACACCTCAGCATCCTCAGAGGGATGCCAATAACCCAGCTGGTCTTCTGGCAATAGCCGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTGCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTAGCTGTTTCCCGTAATTGTAGTGGAGTAGCAGCACGAGCTTGTGGCCTCGTGAGTCTAGAGCCCACGAAGGTCGCCGAGATTCTTAAAGATCGTCCATCTTGGTATCATGATTGCCGCTGCCTTGATGTGTTGAGCATAGTCCCCGCTGGAAATGGGGGGACGATTGAACTCCTGTACATGCAGACTTATGCACCTACGACATTGGCGGCAGCACGTGACTTTTGGACTCTTAGATACACTACCAATATGGAAGATGGAAGTCTTGTGATTTGTGAGAGGTCATTTACTTCATCAACTGGTGGCCCCACAGGTCCTCCTGCATCAAACTTTGTTAGAGCTGAAATGCTTCCTAGTGGTTTTCTAATTAGACCCTGTGAGGGTGGTGGATCCATTATTCACATTGTTGATCATGTGGATTTAGATGCTTGGAGTGTTCCCGAAGTGCTCAGGCCCCTTTATGAATCATCAAAAATCCTGGCTCAGAAAATGACTATTGCAGCCTTGCGACATATAAGGCAAATTGCTCAAGAAACAAGTGGAGAAATTCAATATGGTGGGGGCCGCCAGCCTGCTGTTTTAAGAACATTTAGCCAGAGACTTAGCAGGGGCTTCAATGATGCTGTCAATGGCTTTGTGGATGATGGCTGGTCACTAATGGGTAGTGATGGTGCTGAGGATGTGACCATAGCCATTAACTCGTCTCCGAATAAATATTTTGGGTCCCAATATGGTACCTCAATGTTCCCTGCATTTGGAGGTGGGGTTTTATGTGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTACGCTTTCTGAGGGAACATCGCTCGGAGTGGGCTGATTACGGGGTTGATGCATACTCTGCTGCGTGTCTCAAGGCTAGTCCTTACACAATTCCTTGTGCAAGGCCCGGTGGCTTTCCCAGTAGTCAAGTCATTCTACCACTTGCTCATACTATTGAACATGAGGAGTTCTTGGAAGTAGTCCGGATAGAGGGTCATGCATTTTCCCCTGAAGATGTCGCACTTGCCCGGGATATGTATCTTCTGCAGCTATGCAATGGAATTGATGAGAATGCAATCGGATCATGCGCTCAACTTGTGTTTGCACCTATTGATGAATCATTTGCTGATGATGCTGTCTTGCTTCCTTCTGGTTTCCGTGTTATACCATTGGATCCTAAAACAAATGGTTCGGCTGCAAATAGAACTTTGGATCTGGCTTCTACACTTGAAGCTGGATCTGGCAATGCCCGAGCACCTGGTGACACTGATCCGAACAGTTACAATCTTAGGTCGGTCCTTACTATTGCGTTCCAATTTATGTTTGAGAACCATATGAGAGACAATGTGGCTGCTATGGCTCGCCAGTATGTGCGTGGTGTTGTTGGGTCTGTTCAGAGAGTTGCCATGGCTATTGCTCCCTCTCGGCCAAGTACCCAGCTCGGGCCAAAGTCTCTTCCTGGTTCTCCAGAGGCTCTTACTTTAGCACGATGGATCTGCAGAAGCTACAGGATTCACACTGGTGGTGAGATTTTTCATGTTGAGTCCACAGCCACTGACGCGATCTTGAAGCAACTTTGGCACCATTCAGACGCAATCATGTGCTGCTCTGTAAAAGCAAATGCATCCCCTGTTTTCACCTTTGCAAACCAGGCTGGACTTGACATGCTTGAAACCACTCTTGTGGCCCTTCAAGATATAATGCTTGATAAAGTTCTCGATGAAGCTGGCCGCAAGATTCTCTGCTCCGAGTTCACCAAGATTATGCAGCAGGGGTTTGCTTATCTGCCAGCAGGAATATGCGTATCGAGCATGAACAGGCCAGTGTCGTATGAGCAGGCCATTGCTTGGAAAGTTCTGAACGATGATGATTCCAATCACTGCCTTGCCTTCATGTTCATGAACTGGACTTTTGTCTGA 2541 0.4703 MALSMHKDSPSKQQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASATTTDNSCESVVMSGQKQQHNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYHDCRCLDVLSIVPAGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTNMEDGSLVICERSFTSSTGGPTGPPASNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTIAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLSRGFNDAVNGFVDDGWSLMGSDGAEDVTIAINSSPNKYFGSQYGTSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYTIPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCNGIDENAIGSCAQLVFAPIDESFADDAVLLPSGFRVIPLDPKTNGSAANRTLDLASTLEAGSGNARAPGDTDPNSYNLRSVLTIAFQFMFENHMRDNVAAMARQYVRGVVGSVQRVAMAIAPSRPSTQLGPKSLPGSPEALTLARWICRSYRIHTGGEIFHVESTATDAILKQLWHHSDAIMCCSVKANASPVFTFANQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFTKIMQQGFAYLPAGICVSSMNRPVSYEQAIAWKVLNDDDSNHCLAFMFMNWTFV 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0041 846 CDD bZIP 71 110 - -
Lele34g0041 846 CDD START_ArGLABRA2_like 161 377 - -
Lele34g0041 846 Pfam Homeodomain 19 77 IPR001356 GO:0003677
Lele34g0041 846 ProSiteProfiles START domain profile. 157 385 IPR002913 GO:0008289
Lele34g0041 846 FunFam Homeobox-leucine zipper protein REVOLUTA 19 74 - -
Lele34g0041 846 SUPERFAMILY Homeodomain-like 19 80 IPR009057 -
Lele34g0041 846 SUPERFAMILY Bet v1-like 167 378 - -
Lele34g0041 846 SMART START_1 166 376 IPR002913 GO:0008289
Lele34g0041 846 FunFam homeobox-leucine zipper protein ATHB-15 202 383 - -
Lele34g0041 846 Pfam MEKHLA domain 701 845 IPR013978 -
Lele34g0041 846 Gene3D - 10 85 - -
Lele34g0041 846 Coils Coil 88 108 - -
Lele34g0041 846 SMART HOX_1 16 82 IPR001356 GO:0003677
Lele34g0041 846 CDD homeodomain 19 79 IPR001356 GO:0003677
Lele34g0041 846 Gene3D - 185 380 IPR023393 -
Lele34g0041 846 MobiDBLite consensus disorder prediction 1 21 - -
Lele34g0041 846 Pfam START domain 167 374 IPR002913 GO:0008289
Lele34g0041 846 ProSiteProfiles 'Homeobox' domain profile. 14 78 IPR001356 GO:0003677
Lele34g0041 846 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 15 846 IPR044830 GO:0003700
Lele34g0041 846 SUPERFAMILY Bet v1-like 414 601 - -
Lele34g0041 846 MobiDBLite consensus disorder prediction 7 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0041 Lele-ChrLele34 333962 340008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0041 5 846 Homeobox Transcription Factor Family AT2G34710 79.905 0.0 1418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele34g0041 START 3.9e-51 CL0209