Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0036 ATGAATAACCGTGGGGGAGTTGGGAGGGCTGCCTCGGGGAAAAGAAGACTGAAAGACTTATTGCTTCAAAAAGACAATCGTTTTTGTGCTGATTGTAATGCTCCAGATCCCAAGTGGGCGTCGGCTAATATTGGAGTTTTTATCTGTTTAAAATGTTGCGGTGTACACAGAAGCCTTGGTACTCATATATCAAAGGTTCTGTCCGTGACATTGGACGAATGGTCGGATGATGAAATAGATGCAATGATTGAAGTTGGAGGAAATGCTTCTGCTAATAAAATTTATGAGGCTCATATTCCAGAAGGATACAGTAAGCCCACACCAGATGCCAGTCATGAACAGCGTGCAAATTTCATCCGATCCAAGTATGAGCTTCAAGACTTTTTGAAACCTGGTTTGCGCATTGCATCTGGGAAAAGCGCTCAAGAGTCAAATTCTTCCAAAAAACTTACGGATAGTTCCCGAACCACTAGTGGTCCCCAAAAAACGGAAGGAATGGTTGAATTTATCGGGTTGCTCAAGGTGACAGTGGTTAAAGGCGCAAATTTAGCTATTCGAGATATGATGTCTAGTGACCCATATGTCATCTTAAATCTTGGCCAACAGACAGTTCAATCAAGTGTAGTGAACAGTAACTTGAATCCAGTCTGGAATGAGGAACTTATGCTATCTGTTCCCCAGGAATATGGAACATTGAAATTGCAAGTATATGATCATGATACATTCTCGGCGGATGATATAATGGGAGAGGCAGAAATTGATCTCCAACCCATGATAACGTCAGCAATGGCATTTGGAAATGCAGAAATGTTCGGCAATATGCAGATTGGGAAATGGCTTAAATCTGATGACAATGCTCTCATGGAGGATAGCTTAGTCAATATAGTTGATGGAAAGATTTTACAAAAAATGACTCTCAAGCTCCAGAATGTTGAATCTGGAGAAATAGATCTGGAACTTGAATGGTTGCCTCTTGATCAATAG 984 0.4106 MNNRGGVGRAASGKRRLKDLLLQKDNRFCADCNAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWSDDEIDAMIEVGGNASANKIYEAHIPEGYSKPTPDASHEQRANFIRSKYELQDFLKPGLRIASGKSAQESNSSKKLTDSSRTTSGPQKTEGMVEFIGLLKVTVVKGANLAIRDMMSSDPYVILNLGQQTVQSSVVNSNLNPVWNEELMLSVPQEYGTLKLQVYDHDTFSADDIMGEAEIDLQPMITSAMAFGNAEMFGNMQIGKWLKSDDNALMEDSLVNIVDGKILQKMTLKLQNVESGEIDLELEWLPLDQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0036 327 Pfam Putative GTPase activating protein for Arf 15 130 IPR001164 GO:0005096
Lele34g0036 327 Pfam C2 domain 171 261 IPR000008 -
Lele34g0036 327 ProSiteProfiles C2 domain profile. 154 268 IPR000008 -
Lele34g0036 327 Gene3D Arf GTPase activating protein 6 133 IPR038508 -
Lele34g0036 327 SMART arf_gap_3 14 136 IPR001164 GO:0005096
Lele34g0036 327 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 169 327 - -
Lele34g0036 327 Gene3D C2 domain 169 327 IPR035892 -
Lele34g0036 327 ProSiteProfiles ARF GTPase-activating proteins domain profile. 14 128 IPR001164 GO:0005096
Lele34g0036 327 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 9 327 IPR044518 GO:0005096|GO:0005543
Lele34g0036 327 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 167 256 IPR035892 -
Lele34g0036 327 CDD ArfGap 17 123 - -
Lele34g0036 327 FunFam Arf-GAP with dual PH domain-containing protein 1 9 137 - -
Lele34g0036 327 PRINTS HIV Rev interacting protein signature 26 45 IPR001164 GO:0005096
Lele34g0036 327 PRINTS HIV Rev interacting protein signature 45 62 IPR001164 GO:0005096
Lele34g0036 327 PRINTS HIV Rev interacting protein signature 66 87 IPR001164 GO:0005096
Lele34g0036 327 SMART C2_3c 172 267 IPR000008 -
Lele34g0036 327 MobiDBLite consensus disorder prediction 138 162 - -
Lele34g0036 327 CDD C2_ArfGAP 170 314 - -
Lele34g0036 327 SUPERFAMILY ArfGap/RecO-like zinc finger 14 130 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0036 Lele-ChrLele34 292601 296742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0036 5 327 C2H2 Transcription Factor Family AT4G21160 74.096 0.0 518