Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0003 ATGGTGCCTAGATCAATGCAAAGCTGGAGTGGAAATGTCTCAGCTTTATTGTGGAGGTTGTCGGACATTGCTAATGTACACACGTGGAGCTCCAAGTGTGAGATGTTCTTGCTGTCAAACCATAAATCTTGCACCAGGAAGTTTATGTGCCCTAACCAACTCGCTCATATAAATTGTGGAAACTGCCGGACTACACTCATGTATCCATTTGGTGCTCCATCAGTCAAATGTGCAGTTTGTCACTATATTACTAACGTCAGTGTAAGTACATATCAGTTGTTGGAAGCATAA 291 0.4227 MVPRSMQSWSGNVSALLWRLSDIANVHTWSSKCEMFLLSNHKSCTRKFMCPNQLAHINCGNCRTTLMYPFGAPSVKCAVCHYITNVSVSTYQLLEA 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0003 96 Pfam LSD1 zinc finger 59 83 IPR005735 -
Lele34g0003 96 PANTHER PROTEIN LSD1 32 87 IPR040319 -
Lele34g0003 96 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 56 85 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0003 Lele-ChrLele34 59628 61872 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Lele34g0003 zf-LSD1 8.4e-15 No_clan