Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1590 ATGGTATTTTGTTCTCAGCTTTTGATTGTCCTCATTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGAGAAATCCAACCACGTGGTTGCTGCTACAGTTTGGAGATCCCATCAGGCAATCCGAAGGATGCTTGTGTTACTTATTTTGATGCTCGATCGACAAGTGGTAAAATCAGAATCTGCTACTATTAAGATACCAGAGTTGGATTTTGAGATTCCTCCTGAGGCTCAACGTGGATCTCTGTCAACGGTATTTCTTTTAAATACTTTTCTCTTGTCTGTTCCCAATCATTGTGTTGAAAGTGGCTTCTTGTCTTCAATTGTTTCCCTATGTATACTAGCACGAGCTGCTGATGAACTTCAGGCCCTTCAAGATGAGCACAAAGTAAATTTTGCTCTTTTCCTTGTTAGCCCACAGACGGCTGAAGCAATTGACCAGTTCTTAATGAAATTGAGAGCTTGCAAGGCTGGAGAGCTTTCATTCACATTTATTCTTGATGACCCTGCTGGAAACAGCTTCATTGAAAATCCGTATGCGCCATCATCTGATCCATCATCGAGTATCAAGTGCTATGAGCGTACTCCTGAGCAGCAAGCATCATTAGGATATCTTGTTGACTCTTCACAACTCGAAGTGGGTCATGATGTAGCATCAACAGTGGAAGAAGCTGGGGTTGCTGATCAAGGGAGGAGAGAACCACATGGGTCAATAGGGGCAGCTGCTGGTCATCGAGCAATTGCACAGAGTAATAGTGCTGAAATTGCAGAAGCCTTATTTAGATATACTGCGCCGGAAGAGGTAGTGCTTGCACTACCAGGTGCGAGACTCGAATGTTTGTCACTAGAAGTTATTGTTATGGCATCCACCTGTGATGCTTGTGGTTACCGCAACTCTGAGTTAAAACCTGGTGGACGAATTCCTGAAAAAGGAAAGACGATTACACTTTCCGTTAAAAATGTTAAAGATCTAAGCCGTGATGCAATAAAGTCTGATACTGCTAGTGTAAAACTTCCTGAACTCAACTTGGAGATAGCAAGTGGCACTCTAGGAGGAATTGTTGCGACTGTTGAAGGACTAATCACAAAAATTAGTGAAAATGAGGAATACGAGAGGTCATGGGAGCAAAATGAAGCACTGGGTCTGAATGATATTGACACTTCTTTAGCCGATGTAGCTTATGAAGCAGCAAATTATGCCAAGACTGACTGA 1212 0.4266 MVFCSQLLIVLIVVRGTMKYSLLEKSNHVVAATVWRSHQAIRRMLVLLILMLDRQVVKSESATIKIPELDFEIPPEAQRGSLSTVFLLNTFLLSVPNHCVESGFLSSIVSLCILARAADELQALQDEHKVNFALFLVSPQTAEAIDQFLMKLRACKAGELSFTFILDDPAGNSFIENPYAPSSDPSSSIKCYERTPEQQASLGYLVDSSQLEVGHDVASTVEEAGVADQGRREPHGSIGAAAGHRAIAQSNSAEIAEALFRYTAPEEVVLALPGARLECLSLEVIVMASTCDACGYRNSELKPGGRIPEKGKTITLSVKNVKDLSRDAIKSDTASVKLPELNLEIASGTLGGIVATVEGLITKISENEEYERSWEQNEALGLNDIDTSLADVAYEAANYAKTD 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1590 403 Pfam ZPR1 zinc-finger domain 52 176 IPR004457 GO:0008270
Lele33g1590 403 Pfam ZPR1 zinc-finger domain 283 371 IPR004457 GO:0008270
Lele33g1590 403 SMART zpr1 17 177 IPR004457 GO:0008270
Lele33g1590 403 SMART zpr1 246 398 IPR004457 GO:0008270
Lele33g1590 403 PANTHER ZINC FINGER PROTEIN ZPR1 50 85 IPR040141 -
Lele33g1590 403 Gene3D ZPR1, A/B domain 306 367 IPR042451 -
Lele33g1590 403 Gene3D ZPR1, zinc finger domain 280 305 IPR042452 -
Lele33g1590 403 Gene3D ZPR1, A/B domain 46 204 IPR042451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1590 Lele-ChrLele33 26003519 26008583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1590 368 401 C2H2 Transcription Factor Family AT5G22480 73.529 2.76e-09 57.0