Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele33g1573 | ATGGTGTCCAGAATGCGCAAGCTTAGAAACTCATTCGCCTCCCTCTTGCCATCTTCCTCCAAATCCGATTCCTCCTCTCGGCTTCCTTCCGACAATGTCACCGATTCCTACAATGACCCGCAACTGCCGCCGCAGCCGCCTTATCGCCGGTCCGTTTCCAACGCCGACATCACCTCCTCCAGCTCCTTGTTTTCTCGATCCTCTTCTTCGATTTCTCGCCTCTCTCGCGTTGTCAGCATGCGATCCACCAAGGAGTTGCATTACCTTGTGCAGAAGACTTGCACCATTTGCTTAGGTGACTTGAAGATAGGGCAAGGCCGGGCCATCTTTGTTGCTGAGTGTGCTCATTCCTTCCATTTCAATTGTATCGCTTCCAATGTCAGGCATGGCAGCCATGTCTGTCCCATCTGTCGTGCCAAATGGAAAGAAATCCCATATCAAGCTCCAATCAATTTCCCTCCTCCTCCTCCTCCCCCCCTCCGGGTCAGGAACAGGCTCAGACCACTGGCTTCTTCACCACCTCGTCGATTAAATCCCTCAGCTATCATCGAGCCTCTCCGCTTCTCTGATGATGAGCCACTCCCTGTTCCAGCAACCTCCGCTGAAGAACATGTTTCATCTGCACCTAATGTTGTGACTGTCAAGTCCTTCGCGGAGTATCCTGTCCTCTCTGCATCTGAAGCTCATCCAGATTTTGCTGTTCTTGCCAACATCGGTGCACCAGCGCTTTCTCAACGTGATCATGCACCTGTGGACCTTGTTACGGTGCTTGACATCAGTGACAGCATGGCTGGTTCAAAGCTGACACTTCTCAAACAGGCTGTTCTTTTTATCATTCAGAATTTGGGTGCTTCTGACAGACTTTCTATAGTTGTTTTCTCCTCCACTGCTCTCAGGATTTTCCCACTTCGTAGGATGACTAATAGTGGCCAATCTGATGCAACCGTTGCCGTCAATTCTCTTTCAACAGATGGCGGAACTGACATTCTGAGTGGCCTCAAAAAAGGAGCTCGTGTACTCGAGGAACGGCGAGAGCGAAACCCGGTTCCCAGCATTATGCTTCTCTCTGATGGCAGGTCTCAACCTTTTATAATTCCTCCATTGGGACCCCAATTGCCTGCTTCCATCACCTCCAATAATCATAGTTCAAATGGGGATTCTATTCCTGTCCACACTTTTGGCTTTGGTAGGGATCATGATTCCACTGCATTGCACGCGATCTCTGATGCATCTGGTGGCACCTTTTCCTTTATTGAATCTGTGGGCATGGTGCAAGATGCTTTTGCAAGGTGCATTGGGGGTCTACTCAGTGTTGTGGCTCAAGAGGTACAACTCATCTTCAAAACAATATCACCAGGCCTGCAAATCAATTCAGTACGCTCAGGGAGATACATCAGTGAAATTAGCGATTCTGGTAGGTTATGTGTCATCAATGTCGGTAACATGTATGCAGAAGAGGAAAAGGGATTTCTGTTGTACCTATCAATTCCTGCAATCCCAGCCATTGAAAGAGACAACAATATGGAGAAACAGACTCCTTTACTGAATGTTAAATGCCGATACAAAGACTCAACCTCTGAGGGAGAGCTAGTTAAGGTTAGCGGTGAGAGAGTAGACATTAGAAGAAGATCAAATGGTTCACCAGAGCCTAATGAAATGACAGTGTCCTTGGAGGTTGACGGACATAAAAATAGACTCATGGTGGCTGATGGGATCGCCGAAGCACGAAGGCTGGCTGAGAGAGGAGACCTGCGAGGCGCGAAAGCTTTGCTGGAAACGAAAAGATCGGTTCTATTGTCCTCAGCCTCAGCATCAGCAGGGGATCTTGCTTGCACTTGGCTTGATGCTGAACTTAGAGAAACTAAGGAGAGAATGGAAAGCAGGGAAAGATACGAACATACAGGAAGGGCTTATGTTCTGTCAGGATTAAGTTCACATTCATGGCAGAGATCTACAACCAGAGGAGACTCTTTAACTCAGTCATTTGTAAGTGGCCATGTCAGAGATCCTTCGGTAAGCGGATCGATCGGGTACGACACGCCTTCAATGGTTAACATGGTGAGAATGTCACAAAATCTTAGTCTGAGTGGATCTTGGCCCCTCCCTGAACCTTGA | 2115 | 0.4818 | MVSRMRKLRNSFASLLPSSSKSDSSSRLPSDNVTDSYNDPQLPPQPPYRRSVSNADITSSSSLFSRSSSSISRLSRVVSMRSTKELHYLVQKTCTICLGDLKIGQGRAIFVAECAHSFHFNCIASNVRHGSHVCPICRAKWKEIPYQAPINFPPPPPPPLRVRNRLRPLASSPPRRLNPSAIIEPLRFSDDEPLPVPATSAEEHVSSAPNVVTVKSFAEYPVLSASEAHPDFAVLANIGAPALSQRDHAPVDLVTVLDISDSMAGSKLTLLKQAVLFIIQNLGASDRLSIVVFSSTALRIFPLRRMTNSGQSDATVAVNSLSTDGGTDILSGLKKGARVLEERRERNPVPSIMLLSDGRSQPFIIPPLGPQLPASITSNNHSSNGDSIPVHTFGFGRDHDSTALHAISDASGGTFSFIESVGMVQDAFARCIGGLLSVVAQEVQLIFKTISPGLQINSVRSGRYISEISDSGRLCVINVGNMYAEEEKGFLLYLSIPAIPAIERDNNMEKQTPLLNVKCRYKDSTSEGELVKVSGERVDIRRRSNGSPEPNEMTVSLEVDGHKNRLMVADGIAEARRLAERGDLRGAKALLETKRSVLLSSASASAGDLACTWLDAELRETKERMESRERYEHTGRAYVLSGLSSHSWQRSTTRGDSLTQSFVSGHVRDPSVSGSIGYDTPSMVNMVRMSQNLSLSGSWPLPEP | 704 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele33g1573 | 704 | ProSiteProfiles | VWFA domain profile. | 252 | 439 | IPR002035 | - | |
Lele33g1573 | 704 | SMART | VWA_4 | 250 | 430 | IPR002035 | - | |
Lele33g1573 | 704 | CDD | RING-H2 | 94 | 138 | - | - | |
Lele33g1573 | 704 | Pfam | von Willebrand factor type A domain | 252 | 426 | IPR002035 | - | |
Lele33g1573 | 704 | Pfam | VWA / Hh protein intein-like | 610 | 691 | IPR032838 | - | |
Lele33g1573 | 704 | SUPERFAMILY | RING/U-box | 83 | 149 | - | - | |
Lele33g1573 | 704 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Lele33g1573 | 704 | ProSiteProfiles | Zinc finger RING-type profile. | 94 | 138 | IPR001841 | - | |
Lele33g1573 | 704 | Gene3D | von Willebrand factor, type A domain | 252 | 433 | IPR036465 | - | |
Lele33g1573 | 704 | PANTHER | CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR | 92 | 692 | - | - | |
Lele33g1573 | 704 | SUPERFAMILY | vWA-like | 248 | 432 | IPR036465 | - | |
Lele33g1573 | 704 | Pfam | RING-like zinc finger | 94 | 123 | IPR001841 | - | |
Lele33g1573 | 704 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 55 | 143 | IPR013083 | - | |
Lele33g1573 | 704 | SMART | ring_2 | 94 | 137 | IPR001841 | - | |
Lele33g1573 | 704 | MobiDBLite | consensus disorder prediction | 12 | 39 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele33g1573 | Lele-ChrLele33 | 25897499 | 25900701 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele33g1573 | 94 | 143 | C3H Transcription Factor Family | AT1G74410 | 46.154 | 7.54e-06 | 45.8 |