Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1568 ATGAAGGAAGGGAAGAGGAGTGAGAGCGACAAGGAGAAGACCAAGATCAGAGAGAGGCAAAGAAGGGCCATCACCACTAACATCTTCCATGGCTTGAGGAAGCATGGTGGCTATCGTCTATCTCCTCGCGCTGACATTAACGAGGTCCTTCGCCAACTCGCCCACGAGGCCGGCTGGGTTATTCTCCCCGATGGCACCACCTTCCGCGCCAAGGGGCCGGAGGAGAGTGTTCGAAGGTGGCGTTGGGAGCCCCTCTGTCTAGCAACAAAGATGGGTCTTCGTTATTCTGTTTTCCCGAAAGCCTCAACGACAGTTGTCTTCAACCGGTCTCTGTTCCAGTGGACACGTGCCAAGAGCTCACCGGAGAGGCTCAATCCAGCGACGGTGGCATTTCGGAAGGCTCGTGGATGGCGATGA 417 0.5612 MKEGKRSESDKEKTKIRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRQLAHEAGWVILPDGTTFRAKGPEESVRRWRWEPLCLATKMGLRYSVFPKASTTVVFNRSLFQWTRAKSSPERLNPATVAFRKARGWR 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1568 138 Pfam BES1/BZR1 plant transcription factor, N-terminal 5 74 IPR008540 -
Lele33g1568 138 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 5 88 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1568 Lele-ChrLele33 25857303 25858121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1568 6 71 Glycoside Hydrolase AT2G45880 63.636 1.48e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele33g1568 BES1_N 1.4e-28 No_clan