Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1566 ATGGCACTTTCTATGCACAAAGATTCACCCAGCAAGCAGCAGATGGACTCCAGCAAGTACGTGAGGTATACGCCTGAGCAGGTCGAGGCTTTGGAGAGGGTTTATGCAGAATGCCCAAAACCTAGTTCTCTGAGGAGACAACAGCTCATTAGAGAGTGTCCTCTACTTTCTAATATAGAGCCCAAACAGATCAAAGTTTGGTTTCAGAACCGAAGATGTCGTGAAAAGCAGAGGAAGGAATCTTCACGGCTTCAGACAGTGAACAGGAAGCTCACTGCGATGAACAAGTTGTTAATGGAAGAGAATGATCGACTGCAGAAGCAGGTGTCACAGTTGGTCTACGAAAACGGATACATGAAACAACAGATACATACTGCGTCTGCTACTACTACTACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAACAACAACAGCAAAACCCAACACCTCAGCATCCTCAGAGGGATGCCAATAACCCAGCTGGTCTTCTGGCTATAGCCGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTGCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTAGCTGTTTCCCGCAATTGTAGTGGAGTAGCAGCACGAGCTTGTGGCCTCGTAAGTCTAGAACCCACGAAGGTCGCTGAGATTCTTAAAGATCGTCCATCTTGGTATCATGATTGCCGCTGCCTTGATGTGTTGAGCATAGTCCCCTCTGGGAGTGGGGGGACGATTGAACTCTTGTACATGCAGACATATGCTCCTACAACATTGGCAGCAGCACGTGACTTTTGGACTCTAAGATACACTACCAATATGGAAGATGGAAGTCTTGTGATATGTGAGAGGTCATTGACTTCGTCAACTGGTGGCCCCACAGGTCCTCCTGCATCAAACTTTGTGAGAGCTGAAATGCTTCCTAGTGGTTTTCTAATTAGACCCTGTGAGGGTGGTGGGTCCATTATTCACATTGTTGATCATGTGGATTTAGATGCTTGGAGTGTTCCCGAAGTGCTCAGGCCCCTTTATGAATCATCGAAAATCCTGGCGCAGAAAATGACTATTGCTGCCTTGCGACATATTAGGCAAATTGCTCAAGAAACAAGTGGAGAAATTCAATATGGTGGGGGTCGCCAGCCTGCTGTTTTAAGAACATTTAGCCAGAGACTTAGCAGGGGCTTCAATGATGCTGTGAATGGGTTTGTAGATGATGGCTGGTCACTAATGGGTAGTGACGGTGCTGAGGACGTGACCATAGCCATTAACTCATCTCCGAATAAATTTTTCGGGTCCCAATATGGTACCTCAATGTTCCCTGCATTTGGAGGTGGGGTGTTATGCGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGCTTTCTGAGGGAACATCGCTCGGAGTGGGCTGATTACGGGGTTGATGCATACTCTGCTGCGTGTCTCAAGGCTAGTCCTTACGCAATTCCTTGTGCAAGGCCTGGTGGCTTTCCCAGCAGTCAAGTCATTTTACCACTTGCTCATACTATTGAACATGAAGAGTTCTTGGAGGTGGTTCGTATAGAGGGCCATGCATTTTCCCCTGAAGACGTGGCTCTTGCCCGGGATATGTATCTTCTGCAGCTATGCAATGGAGTTGATGAGAATGCAATTGGATCATGTGCTCAACTTGTGTTTGCACCTATCGATGAATCATTTGCCGATGATGCTGTCTTGCTTCCTTCTGGCTTCCGTGTCATACCATTGGATCCTAAAACAAATGGGTCAGCGGCAAATCGAACTTTGGATCTGGCATCTACACTTGAAGCTGGATCTGGCAATGCGCGAGTTCCTGGTGAAACTGATCCAAACAGTTACAACCTTAGGTCGGTCCTTACTATTGCGTTTCAATTTATGTTTGAGAACCATATGCGGGACAATGTGGCTGCTATGGCTCGCCAGTATGTGCGTAGTGTTGTGGGGTCTGTTCAGAGAGTCGCCATGGCTATTGCTCCCTCTCCGCTAAGTACCCAGCTCGGGCCAAAGTCTCTTCCCGGTTCTCCAGAGGCTCTTACTTTAGCACGTTGGATCTGCAGAAGCTACAGGATTCACACGGGGGGTGAGATATTTCATGTTGAGTCCACAGCAACCGATGCAATCTTGAAGCTACTTTGGCACCATTCAGATGCAATCATGTGCTGCTCTGTAAAAGCAAATGCATCCCCGGTTTTCACATTTGCAAACCAGGCTGGACTTGACATGCTTGAAACCACTCTTGTGGCGCTTCAAGATATAATGCTTGATAAAGTTCTCGATGAAGCTGGGCGGAAGATCCTCTGCTCTGAGTTCACCAAGATTATGCAACAGGGGTTTGCATATCTGCCAGGAGGAATATGTGTATCGAGCATGAACAGGCCAGTGTCGTATGAGCAGGCCATTGCCTGGAAAGTTCTGGACGATGATGATTCCAATCACTGCCTCGCCTTCATGTTCATGAACTGGTCTTTTGTCTGA 2544 0.4772 MALSMHKDSPSKQQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPLLSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMKQQIHTASATTTTDNSCESVVMSGQQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYHDCRCLDVLSIVPSGSGGTIELLYMQTYAPTTLAAARDFWTLRYTTNMEDGSLVICERSLTSSTGGPTGPPASNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTIAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLSRGFNDAVNGFVDDGWSLMGSDGAEDVTIAINSSPNKFFGSQYGTSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAIPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCNGVDENAIGSCAQLVFAPIDESFADDAVLLPSGFRVIPLDPKTNGSAANRTLDLASTLEAGSGNARVPGETDPNSYNLRSVLTIAFQFMFENHMRDNVAAMARQYVRSVVGSVQRVAMAIAPSPLSTQLGPKSLPGSPEALTLARWICRSYRIHTGGEIFHVESTATDAILKLLWHHSDAIMCCSVKANASPVFTFANQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFTKIMQQGFAYLPGGICVSSMNRPVSYEQAIAWKVLDDDDSNHCLAFMFMNWSFV 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1566 847 CDD bZIP 71 110 - -
Lele33g1566 847 SUPERFAMILY Homeodomain-like 19 80 IPR009057 -
Lele33g1566 847 Gene3D - 10 85 - -
Lele33g1566 847 Gene3D - 186 381 IPR023393 -
Lele33g1566 847 CDD START_ArGLABRA2_like 162 378 - -
Lele33g1566 847 Pfam Homeodomain 19 77 IPR001356 GO:0003677
Lele33g1566 847 FunFam homeobox-leucine zipper protein ATHB-15 203 384 - -
Lele33g1566 847 SUPERFAMILY Bet v1-like 415 602 - -
Lele33g1566 847 CDD homeodomain 19 79 IPR001356 GO:0003677
Lele33g1566 847 Pfam START domain 168 375 IPR002913 GO:0008289
Lele33g1566 847 MobiDBLite consensus disorder prediction 1 21 - -
Lele33g1566 847 FunFam Homeobox-leucine zipper protein REVOLUTA 19 74 - -
Lele33g1566 847 MobiDBLite consensus disorder prediction 134 158 - -
Lele33g1566 847 ProSiteProfiles 'Homeobox' domain profile. 14 78 IPR001356 GO:0003677
Lele33g1566 847 ProSiteProfiles START domain profile. 158 386 IPR002913 GO:0008289
Lele33g1566 847 SUPERFAMILY Bet v1-like 168 379 - -
Lele33g1566 847 Pfam MEKHLA domain 702 846 IPR013978 -
Lele33g1566 847 SMART START_1 167 377 IPR002913 GO:0008289
Lele33g1566 847 MobiDBLite consensus disorder prediction 7 21 - -
Lele33g1566 847 Coils Coil 88 115 - -
Lele33g1566 847 MobiDBLite consensus disorder prediction 134 160 - -
Lele33g1566 847 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 15 847 IPR044830 GO:0003700
Lele33g1566 847 SMART HOX_1 16 82 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1566 Lele-ChrLele33 25836513 25842563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1566 5 847 Homeobox Transcription Factor Family AT2G34710 80.756 0.0 1410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele33g1566 START 4.7e-52 CL0209