LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele33g1557	ATGGCCATGATGGGGAGGATTTTAGTTGAGGGACTGTTCCGTGTGCTGAATCTAGCGATAATCTCAGTGATCCTGGCCACCGGGGAAGCTCAATCAAAGTCAATTTTTATTAGTTGCGGTTCAAATTCTTCAGTAAATGCTGATGATAGAAGATGGATTGGGGATATGGCCCCTAATAATAATATCACCCTTAGTTCTCATGGTATTGCTGCTTCAGCCTCTACATTAAGTGGCAATTCATCCTTTAACCCTCTCTACAAAACCGCCAGGATTTTCACTGGTGCTAACAATTACACAATTAAAGGCGTTCAAGGGAATCATGTCGTTAGGCTCCATTTCTGTCCCTTTGTGTTTGAGGACTATAATGTAAATGAGTCCTCATTTGATGTTGTGGCCAATGGTCTGAAACTACTGGCGGAGTTTAATGTTCCTGGAGAGATATCACACAAGAATACGTACTTGCAGAGTTCTGGAAGCAATTCAACTTCATCTTTCTTGATTAAAGAATATATTCTTGCTGTCAATTCAGGTGTGCTTGTGATTGAACTCATCCCAACAAAAAGCTCATTTGGCTTTATCAATGCCATTGAGATTGTCCCAGTTCCAGATGAGCTTTTTGTAGGCTCTGTCAATAAAGTTGGTGGAAGCGATGCAAATTTGAATTTGACTGGACGTGGAATGGAGACCATGTACAGGTTGAATGTTGGTGGTCCCAAAATCACATCCAATGAGGACAAAGATACTTGGAGAACTTGGGAAGTGGATTCTGGCTACATGGTCATAGAAAGTGCCGGGTCAGGAATAAAGAACCATTCTAACATAACATATGCTTCAACGAATGATTCTTCGGTGGCCCCTCTCATTGTGTATGAGACTGCAAGGACAATGTCCAACACTCAAGTCTTGGAGAAAAGGTTCAACATATCATGGAAGTTCGAAGTGGACCCTGATTTTGAGTATATGATCCGATTACATTTCTGTGAGCTGGAATTTGACAAGGCAAATGAGAGAATTTTTAGGATTTATATAAACAACAAGACAGCAGCAGATAATGTTGATATTTTTGTACAAGCAGGAGGGATGAATAAAGCATATCACCAGGATTATGTAGATGGTGTGTCCTCAAGAATCTACACGCTATGGGTTCAGTTAGGTCCTGATTCAGCTGCTGGTGCTGCTGGAACTGATGCCCTTTTAAATGGGCTAGAAATTTTCAAGATTAGTCGAAATGGGAATCTGGCCTATGTAGAGAGATATGGTTCAGCAGGAAATTCAGCTAGCAAATCAAAAACACGGATTCTTTGGATGGGAATTGGAGCAGGTCTAGCTTCTGTTTCCATAATTACATTAACAGTTGCTCTGTTTTTCTGGTTTTGCAAAAGAAGCAGGAAAACAACAAGTGATACCAAAAGCAATGCTCCAGGTTGGCGGCCATTGTTTCTTTACGGCGCTACTGTAAACAGCACTGTTAGTGCCAAGGGTTCAGCAGGACTTCAGAATCCATATGGATCAGTGGCATCAATCCGACTTGGCAAGCGGTTCAAACTAGCAGAAATTCGTGCTGCAACAAAAAATTTTGATGACAGTTTGATGATTGGAGTAGGAGGCTTTGGTAAGGTGTACAGGGGAGAGATTGATGATGGGGTCCCTGCTGCAATTAAGCGAGCCAACCCGCAGTCTGATCAAGGTCTCGCTGAGTTTGAGACAGAGATTGAGATGCTTTCCAAACTGAGGCATAGGCATCTGGTGTCCCTGATTGGATTCTGTGAGGAGCAAAATGAAATGATTTTGGTTTATGAGTATATGGCAAATGGTACCCTCAGAAGTCATCTATTTGGGAGTGATCTTCCACCACTAACTTGGAAGCAGCGCCTAGAAGTGTGCATAGGTGCTGCAAGAGGACTCCATTATCTGCATACAGGTGCAGAGCGTGGAATAATCCACAGGGATATCAAGACAACCAATATATTGTTAGATGAGAACTTTGTAGCTAAAATGTCTGATTTTGGGTTGTCAAAAGACGGCCCTGCTTTGGACCACACTCATGTTAGTACAGCTGTGAAAGGAAGTTTTGGTTACCTAGACCCTGAGTACTTCAGACGACAGCAGCTAACTGAGAAGTCAGATGTGTACTCTTTTGGTGTTGTGTTGTTTGAAGTTGTTTGTGCCCGAGCTGTGATAAATCCTACATTGCCTAAAGATCAAATCAATCTTGCAGAATGGGCAATGAGGTGGCAGAGGCAGAGATCGCTTGAAACTATCATCGATCCACGTCTTGCAGGAGGCTATCATCCCGAGTCCTTGTCTAAGTATGGAGAGATAGCAGAAAAATGTCTTGCTGATGAGGGGAAGAATAGGCCCACAATGGGGGAGGTGTTGTGGCACTTGGAGTATGTTCTTCAAGTTCACGAAGCTTGGTTGAAAACTACCAGCAGAGAAGCTTCATTCTCAAGCAGTCAAGCTTTAAGAGGAGTGAAAGAGGGAGAACCAGAAGAGATATAG	2502	0.4273	MAMMGRILVEGLFRVLNLAIISVILATGEAQSKSIFISCGSNSSVNADDRRWIGDMAPNNNITLSSHGIAASASTLSGNSSFNPLYKTARIFTGANNYTIKGVQGNHVVRLHFCPFVFEDYNVNESSFDVVANGLKLLAEFNVPGEISHKNTYLQSSGSNSTSSFLIKEYILAVNSGVLVIELIPTKSSFGFINAIEIVPVPDELFVGSVNKVGGSDANLNLTGRGMETMYRLNVGGPKITSNEDKDTWRTWEVDSGYMVIESAGSGIKNHSNITYASTNDSSVAPLIVYETARTMSNTQVLEKRFNISWKFEVDPDFEYMIRLHFCELEFDKANERIFRIYINNKTAADNVDIFVQAGGMNKAYHQDYVDGVSSRIYTLWVQLGPDSAAGAAGTDALLNGLEIFKISRNGNLAYVERYGSAGNSASKSKTRILWMGIGAGLASVSIITLTVALFFWFCKRSRKTTSDTKSNAPGWRPLFLYGATVNSTVSAKGSAGLQNPYGSVASIRLGKRFKLAEIRAATKNFDDSLMIGVGGFGKVYRGEIDDGVPAAIKRANPQSDQGLAEFETEIEMLSKLRHRHLVSLIGFCEEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDIKTTNILLDENFVAKMSDFGLSKDGPALDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQRSLETIIDPRLAGGYHPESLSKYGEIAEKCLADEGKNRPTMGEVLWHLEYVLQVHEAWLKTTSREASFSSSQALRGVKEGEPEEI	833

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele33g1557	833	PANTHER	OS07G0166700 PROTEIN	512	803	IPR045272	GO:0004714\|GO:0006468
	Lele33g1557	833	SMART	serkin_6	526	799	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g1557	833	FunFam	receptor-like protein kinase FERONIA	491	601	-	-
	Lele33g1557	833	ProSitePatterns	Protein kinases ATP-binding region signature.	532	554	IPR017441	GO:0005524
	Lele33g1557	833	CDD	STKc_IRAK	532	797	-	-
	Lele33g1557	833	Pfam	Malectin-like domain	37	407	IPR024788	-
	Lele33g1557	833	Gene3D	Phosphorylase Kinase; domain 1	499	601	-	-
	Lele33g1557	833	Gene3D	-	226	408	-	-
	Lele33g1557	833	Gene3D	-	31	201	-	-
	Lele33g1557	833	ProSiteProfiles	Protein kinase domain profile.	526	798	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g1557	833	FunFam	Receptor-like protein kinase FERONIA	226	409	-	-
	Lele33g1557	833	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	646	658	IPR008271	GO:0004672\|GO:0006468
	Lele33g1557	833	SUPERFAMILY	Protein kinase-like (PK-like)	503	798	IPR011009	-
	Lele33g1557	833	Pfam	Protein tyrosine and serine/threonine kinase	531	793	IPR001245	GO:0004672\|GO:0006468
	Lele33g1557	833	Gene3D	Transferase(Phosphotransferase) domain 1	602	821	-	-
	Lele33g1557	833	FunFam	Receptor-like protein kinase FERONIA	602	816	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele33g1557	Lele-ChrLele33	25777184	25779685	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele33g1557	1	827	Receptor kinase-like Gene Family	AT1G30570	65.821	0.0	1132

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Lele33g1557		Malectin_like	1.8e-38	CL0202