Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1555 ATGAACCTCTTTAGGCTTTTGGTTTTATCCTTATCTTTCTTCTCTGTCATGGGACAGCTTCCTTCTCAGGACATCTTAGCATTGTTGGAATTTAAGAAAGGCATCAAGCATGACCCTACTCGTTATGTCCTCAATTCCTGGAATGAAGAATCCATTGACTTTAATGGATGCCCATCTTCATGGAATGGAGTTCTGTGTAATGGTGGTAATGTTGCCGGGGTTGTCCTAGATAACCTGGGACTCTCTGCTGAGGTTGACTTGAGTGTTTTTTCAAACCTCACGAAGCTTGTCAGGCTCTCCTTGTCCAACAATTCCATATCAGGAACACTCCCCGACAATGTTGGATACGTCAAGAGTCTTCAATTTCTAGACATCTCCAATAACCTTTTCTCTTCGTCCATACCACAGGGAATTGGTAAGCTAGCTAGCTTACAGAACTTGTCATTGGCGGGGAATAATTTCTCTGGCCCAATTCCTGTCTCAATTGCAGGGATGTCATCGATCCAATCTTTGGACTTGAGCCGTAACTCCTTTTCTGGAGTGCTGCCTGCTTCTTTGACTAAGCTGAATAGCCTGGCATCTCTCAATTTGTCTCATAACAGCTTCACTGGAAAGATTCCCAAAGGTTTTGATATGATGTCTGCTCTTGAAAAGGTTGACTTGCATGGAAATATGCTTGATGGTCAACTAGATATTAAATTTATGCTGTTTACAAGTGCTAGCTATGTTGATTTTAGTGATAATATGTTAGTGAGTTCTAACTCCCCACAGCAGAGGTTTCTACCCCGAATCTCTGAAAGTATCAAGTATTTGAATTTAAGCCACAATCAGCTGATTGGATTGTTGGATAGTGAAGGCGAGCTGTCACTTTTTGAAGACCTGAAGGTGTTGGATCTTAGCTACAATCAATTGTCTGGAGAACTGCCTGAATTTGAATTTGTCTATGATCTCCAGGTCCTCAGGCTTAGCAACAACAGATTTTCAGGATTTCTTCCAAATAGCCTGCTCAAGGGAGACCCTTTGGTTGTAACTGAACTTGACTTGAGTGCCAACAATCTCTCAGGGCCAATAGGATTAATCACATCAACGACATTGCGCTTTCTGAATCTCTCATCAAATGGTTTTACTGGTGAGCTGCCACTTCTAACTGGGAGCTGTGCGGTTCTTGATCTTTCAAATAACAGACTAGAAGGAAATCTATCCAGGATGGTGAAATGGGGAAACATAGAATTTCTTGATCTCAGTAGGAATCATTTCACAGGGCCCATTCCTGAGGAAACCCCTCAATTTTTGCGATTGAATTATCTGAATTTGTCCCATAATTCTCTTAGCAGCTCCCTCCCTAGTGTTTTAATGCAGTATCCGAAGCTAAGAGTGCTTGATCTTAGTTCCAACCAGTTAGATGGAGAGCTTTCTGATAAGCTGCTTGACATGCCAACTTTGCAAGAGCTTCATCTTGAAAATAATCTCATTTCAGGCGGCATTAATATATCTTCTTCCCCTGGTCAATCTGATCTTGTGATTCTCGATATTTCTCACAACCAATTTACTGGGTACTTCCCTGAAAATTTCGGATCATTAACTGGCCTGAAAGTGCTCAATATTGCTGGAAATAATTTTTCTGGTTCTTTTCCAAGTGCCATTGAATTGAGTTCATTAGATTCGTTAGATATATCGGAGAATCATTTTACAGGTCCGTTACCGACTGACCTGCCAAAGGGACTAAAAAACTTTAATGCTTCATACAATGATCTGTCTGGTATTGTCCCAGAAAATCTCAGGAAGTTCCCTAGTTCTTCTTTCTTTCCTGGGAATGCTAAGTTGCGTTACCCGAATGGTCCTCCTGGATCAAACAATATGCCAGTTGAAGGTTCAAAGAAGAAGCCTATGAGCACTATCATTAAAGTAATAATTATAGTATCATGTGTGGTTGCACTATTCATAGTAATCCTGCTTGCAATCTTCATACATTACATATGCATATCGAGATCTCCACCAGAATATGCTGCTAGTAAGGACATAAACGGGCTCACTCAACCAAACTTACCTGGCATAGGCAGTACAACAGACAGGGGTGGTGCTTTGGTTGTGTCAGCTGAGGATCTTGTGACCTCAAGGAAAGGATCATCTTCAGATATAATCAGCCCAGATGAAAAATTGGCAGCCACAACTATGTCCCCATCAAAAAACAGCCACTTTTCCTGGTCACCAGGGTCTGGTGATTCATTCACTGCTGAAAATTTTGCAAGGCTTGATGTGAGATCACCCGATAAGTTAATTGGCGAGCTGCATTTTCTTGATGATGCAATAACGTTGACCCCCGAGGAGCTTTCAAGGGCCCCTGCTGAAGTTTTGGGGAGAAGCAGTCATGGAACTTCTTATAAGGCTACTCTGGAGAATGGCTTGTTACTGAGGGTGAAGTGGTTGAGAGAAGGAGTGGCTAAACAGAGAAAAGAATTCGCTAAAGAGGCTAAAAAGTTTGCAAACATCAGGCATCCAAATGTTGTGGGATTGAGAGGATATTACTGGGGTCCTACACAGCATGAGAAGCTTATTCTTTCAGACTTCATTTCTCCTGGAAATCTGGCAACTTTTCTTTACGATCGACCAGGAAGAAAAGGTCCACCATTAAACTGGGCCCAGAGGCTAAAGATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCACTTCGATCGTGCTGTTCCTCATGGGAACCTCAAAGCAACAAATGTGCTGTTAGATACACCTGATTTGAATGCAAGAGTCGCTGATTATTGCCTTCACCGGCTAATGACTCAGGCCGGGACTACTGAACAGATTCTTGACGCCAGGGTTTTGGGATATCGTGCGCCAGAGTTAGCTGCTTCCAAGAAGCCAAACCCCTCCTTTAAATCAGATGTCTATGCTTTCGGAGTGATACTCTTGGAACTTTTAACTGGAAGATGTGCCGGTGATGTGATATCAGGTGCGGATGGAGGTGTTGATATGACTGATTGGGTAAGGTTGCGTGTGGCAGAAGGCAGAGGATTGGAATGTTTCGATGCTGCGTTGATGCCAGAAATGGGAAATCCGAGTGCAGAAAAGGGAATGAAGGATTTCCTAGGAATAGCTCTACGATGCATTCGCTCTGTTTCTGAGAGGCCAGGTATCAAGACTATATATGAAGACCTTTCATCTATATAG 3186 0.4262 MNLFRLLVLSLSFFSVMGQLPSQDILALLEFKKGIKHDPTRYVLNSWNEESIDFNGCPSSWNGVLCNGGNVAGVVLDNLGLSAEVDLSVFSNLTKLVRLSLSNNSISGTLPDNVGYVKSLQFLDISNNLFSSSIPQGIGKLASLQNLSLAGNNFSGPIPVSIAGMSSIQSLDLSRNSFSGVLPASLTKLNSLASLNLSHNSFTGKIPKGFDMMSALEKVDLHGNMLDGQLDIKFMLFTSASYVDFSDNMLVSSNSPQQRFLPRISESIKYLNLSHNQLIGLLDSEGELSLFEDLKVLDLSYNQLSGELPEFEFVYDLQVLRLSNNRFSGFLPNSLLKGDPLVVTELDLSANNLSGPIGLITSTTLRFLNLSSNGFTGELPLLTGSCAVLDLSNNRLEGNLSRMVKWGNIEFLDLSRNHFTGPIPEETPQFLRLNYLNLSHNSLSSSLPSVLMQYPKLRVLDLSSNQLDGELSDKLLDMPTLQELHLENNLISGGINISSSPGQSDLVILDISHNQFTGYFPENFGSLTGLKVLNIAGNNFSGSFPSAIELSSLDSLDISENHFTGPLPTDLPKGLKNFNASYNDLSGIVPENLRKFPSSSFFPGNAKLRYPNGPPGSNNMPVEGSKKKPMSTIIKVIIIVSCVVALFIVILLAIFIHYICISRSPPEYAASKDINGLTQPNLPGIGSTTDRGGALVVSAEDLVTSRKGSSSDIISPDEKLAATTMSPSKNSHFSWSPGSGDSFTAENFARLDVRSPDKLIGELHFLDDAITLTPEELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFAKEAKKFANIRHPNVVGLRGYYWGPTQHEKLILSDFISPGNLATFLYDRPGRKGPPLNWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTPDLNARVADYCLHRLMTQAGTTEQILDARVLGYRAPELAASKKPNPSFKSDVYAFGVILLELLTGRCAGDVISGADGGVDMTDWVRLRVAEGRGLECFDAALMPEMGNPSAEKGMKDFLGIALRCIRSVSERPGIKTIYEDLSSI 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1555 1061 Gene3D Transferase(Phosphotransferase) domain 1 858 1061 - -
Lele33g1555 1061 FunFam Leucine-rich repeat receptor-like protein kinase 764 856 - -
Lele33g1555 1061 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Lele33g1555 1061 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 20 265 - -
Lele33g1555 1061 Gene3D Phosphorylase Kinase; domain 1 772 856 - -
Lele33g1555 1061 Pfam Leucine Rich Repeat 317 336 IPR001611 GO:0005515
Lele33g1555 1061 SMART LRR_typ_2 93 115 IPR003591 -
Lele33g1555 1061 SMART LRR_typ_2 550 574 IPR003591 -
Lele33g1555 1061 SMART LRR_typ_2 165 188 IPR003591 -
Lele33g1555 1061 SMART LRR_typ_2 189 212 IPR003591 -
Lele33g1555 1061 SMART LRR_typ_2 454 478 IPR003591 -
Lele33g1555 1061 SMART LRR_typ_2 314 338 IPR003591 -
Lele33g1555 1061 SMART LRR_typ_2 430 453 IPR003591 -
Lele33g1555 1061 SMART LRR_typ_2 117 141 IPR003591 -
Lele33g1555 1061 Gene3D Ribonuclease Inhibitor 23 140 IPR032675 -
Lele33g1555 1061 Pfam Leucine rich repeat 506 563 IPR001611 GO:0005515
Lele33g1555 1061 Pfam Leucine rich repeat 412 467 IPR001611 GO:0005515
Lele33g1555 1061 Pfam Leucine rich repeat 167 226 IPR001611 GO:0005515
Lele33g1555 1061 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Lele33g1555 1061 SUPERFAMILY L domain-like 261 449 - -
Lele33g1555 1061 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 382 612 - -
Lele33g1555 1061 Pfam Leucine Rich repeat 362 378 IPR001611 GO:0005515
Lele33g1555 1061 SUPERFAMILY RNI-like 98 585 - -
Lele33g1555 1061 ProSiteProfiles Protein kinase domain profile. 779 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1555 1061 SUPERFAMILY Protein kinase-like (PK-like) 782 1058 IPR011009 -
Lele33g1555 1061 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Lele33g1555 1061 Pfam Protein tyrosine and serine/threonine kinase 783 980 IPR001245 GO:0004672|GO:0006468
Lele33g1555 1061 PANTHER OS07G0626500 PROTEIN 7 1061 - -
Lele33g1555 1061 Gene3D Ribonuclease Inhibitor 236 619 IPR032675 -
Lele33g1555 1061 FunFam Pollen receptor-like kinase 1 857 1061 - -
Lele33g1555 1061 Gene3D Ribonuclease Inhibitor 141 235 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1555 Lele-ChrLele33 25759138 25763108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1555 6 1049 Receptor kinase-like Gene Family AT1G55610 27.719 4.95e-77 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele33g1555 PK_Tyr_Ser-Thr 3.2e-28 CL0016