Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1514 ATGGCGCCGAGTATTAAAAATCTACAGCTAACTTCCCTCACAAACGTCCCCGCTTCCGATGACGGTGATGCCGATGGCATGGAGGAAGTGCGGCTTTTGGACTCCTACGAAGATAGAAACTACAATGGTTCCGATGGAATTGAAGAAAGGCTGAAGCGAATTCATGTCAGAGTCAATGGCATGACCTGCGCTGCTTGCTCCAATTCCGTCGAAGCAGCTCTGAATGCCGTCGATGGCGTCATCAGCGCCTCCGTGGCTTTGCTTCAGAACAAGGCTGAGTTGGTTTACAACCCGTCTCTTGTTAAGGATGCAGATATTAAAAATGCAATTGAAGATGCAGGGTTTGAAGCAGAGATATTACCTGAGCCCAGTGTTGATGCACTCAGAAAAAAGTCGCACGCAACCTTGGTGGGACAGTTCACAATTGGTGGTATGACATGTGCAGCCTGTGTAAATTCTGTTGAAGGTATTTTAAGAAATCTTCCAGGGGTCAAAAGGGCTGTGGTTGCTTTGGCTACTTCATTAGGAGAAGTTGAATATGATCCTAATGTTAATAATAAAGATGATATAATCAGTGCAATCGAAGATGCTGGTTTTGAAGGTTCATTTGTACAGAGCAGTGAGCAGGATAAAATAACTTTATCAGTTCTTGGTGTATACAGCCTGATTGATTTAGAAGGCATTCTCAGCAACATGAAAGGAGTAAGGCATTTTCGTTTTGACCAGATATCAAGTGAACTGGTGGTTCTTTTTGATCCTGAAGTTTTCAGTTCTAGATCCTTAGTTGATGAGATTGAAAGGGGAAGTAATGGCAAGTTTAAATTACATGTTAGAAGCCCATATACTAGACTGGCTTCCAAAGATGTTGAGGAGACCTCAGCTATGTTTTGGCTTTTTATATCCAGCCTATCTCTTAGTGTGAGTGTTTATTCATTTTATATTGGAAGGGCAGGGGAAAATGGGATAGAGAATCATATAGTTGTGGTATTGTCTAGCCTTAAGTTTATAATGTTGAAAGAATTATTCCTTGAGTCTGCATTTATTCCTCTCTTCTTCATGCGTGTAGTTTGTCCTCATATACCCATGGTATATTCATTATTACTTTGGAGATGTGGACCTTTCCTCATGGGCGATTGGTTGAAGTGGGCTTTGGTGAGTATAATTCAATTTGTAATTGGGAAGCGCTTCTACATTGCAGCTGGCCGAGCTCTCAGAAATGGTTCAACTAACATGGATGTCTTGGTTGCATTGGGAACTACAGCATCTTATGTTTATTCTGTTTGTGCTCTATTGTATGGCGCTCTAACTGGGTTTTGGTCTCCAACATATTTTGAGACCAGTGCCATGCTCATAACATTTGTATTGTTGGGTAAGTACTTGGAATGCCTTGCCAAGGGGAAGACATCAGATGCCATCAAGAAGTTAGTAGAACTTACTCCTGCAACAGCTTTATTGGTTGTCAAAGATAAAGGTGGAAGATCTATTGAAGAGAGGGAAATAGATTCTATGCTCATTCAACCTGGTGACACATTAAAAGTTCTCCCTGGTGCAAAGGTTCCTGCTGATGGCATTGTAACATGGGGCTCAAGTTACATAAATGAGAGCATGGTAACCGGTGAATCTGTACCTGTTTTGAAGGAGGTGAATGCAACTGTTATTGGAGGTACAATAAATTTACATGGAATCCTTTTAATTGAAGCTACCAAAGTGGGATCGGATGCAGTCTTGAGTCAGATAATTAGCTTGGTTGAGACAGCTCAGATGTCCAAGGCTCCCATTCAGAAATTTGCTGATTATGTGGCAAGTATATTTGTTCCCACAGTTGTTGCCTTGGCCCTATTGACGTTTTTGAGTTGGTATATTGCTGGGGCTCTTGGAGCTTACCCTGAAGAATGGTTGCCAGAAAATGGGAATCATTTTGTTTTTGCCCTTATGTTTTCAATATCTGTAGTGGTGATTGCATGTCCCTGTGCACTTGGCTTGGCAACACCAACAGCAGTCATGGTAGCTACAGGGGTTGGGGCTAACAATGGGGTGTTGATCAAAGGAGGAGATGCCTTGGAAAGGGCTCAGATGGTGAAGTACGTGGTATTTGATAAAACTGGTACTTTAACTCAGGGAAAAGCTAGCTTTACCACTGCCAAGGCTAGCAGTGAACACCCACTGGCTCAAGCAATAGTAACATATGCACGTCATTTTCATTTCTTTGATGAATCCTCTGCAACTACTGGTATCAAAGATGATTCCAGTGAGTTGAAGTCTGGGTGGCTTTATGATGTCTCTGACTTCTTGGCTCTTCCAGGAAGAGGTGTTCAGGGTTTCATAGATGGGAAGCGTATATTGGTTGGTAATAGGAAACTAATGGAGGAAAGGAGCATAGATATTCCAACTGAAGTGGAGAATTTTGTGGTCGAGCTGGAAGAAAGTTCAAAGACAGGGATTCTGGTTGCATATGGTGATGAGCTAACTGGAGTTATAGGGGTTGCAGACCCTCTGAAGAGAGAGGCTCCTGTGGTTATTGAGGGCCTCAAGAAAATGGGTGTCAGACCTATTATGGTTACAGGAGATAACTGGAGAACAGCTCAAGCTGTTGCCAAGGAGGTTGGCATTGAAGATGTTAAGGCTGAGGTTCTGCCTGCAGGAAAGGCTGATGTTGTCCGTTCATTCCAGAAAGATGGAAGCTTAGTTGCAATGGTGGGCGATGGCATCAACGACTCTCCCGCGTTAGCTGCTGCAGATGTTGGTATCGCCATTGGGGCCGGGACCGACATTGCAATAGAAGCGGCTGATTATGTGTTGATGAGAAATAATTTGGAAGATGTAATCACTGCCATTGATCTCTCTAGGACAACCTTCTCACGTATTCGATTGAATTATTTCTTTGCAATGGCCTACAATGCAGTTGCCATACCAGTTGCTGCTGGGGTTCTTTATCCTTCACTGAGGATCAAGCTGCCTCCATGGGTCGCTGGCACATGCATGGCTCTCTCATCTGTAAGTGTGCTTCAAAACTTGTACAGTAAGTTTAACTTGTTCTTTGTGGAGCTCTCGTCAATTTGA 3060 0.431 MAPSIKNLQLTSLTNVPASDDGDADGMEEVRLLDSYEDRNYNGSDGIEERLKRIHVRVNGMTCAACSNSVEAALNAVDGVISASVALLQNKAELVYNPSLVKDADIKNAIEDAGFEAEILPEPSVDALRKKSHATLVGQFTIGGMTCAACVNSVEGILRNLPGVKRAVVALATSLGEVEYDPNVNNKDDIISAIEDAGFEGSFVQSSEQDKITLSVLGVYSLIDLEGILSNMKGVRHFRFDQISSELVVLFDPEVFSSRSLVDEIERGSNGKFKLHVRSPYTRLASKDVEETSAMFWLFISSLSLSVSVYSFYIGRAGENGIENHIVVVLSSLKFIMLKELFLESAFIPLFFMRVVCPHIPMVYSLLLWRCGPFLMGDWLKWALVSIIQFVIGKRFYIAAGRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKGGRSIEEREIDSMLIQPGDTLKVLPGAKVPADGIVTWGSSYINESMVTGESVPVLKEVNATVIGGTINLHGILLIEATKVGSDAVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVALALLTFLSWYIAGALGAYPEEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQMVKYVVFDKTGTLTQGKASFTTAKASSEHPLAQAIVTYARHFHFFDESSATTGIKDDSSELKSGWLYDVSDFLALPGRGVQGFIDGKRILVGNRKLMEERSIDIPTEVENFVVELEESSKTGILVAYGDELTGVIGVADPLKREAPVVIEGLKKMGVRPIMVTGDNWRTAQAVAKEVGIEDVKAEVLPAGKADVVRSFQKDGSLVAMVGDGINDSPALAAADVGIAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRTTFSRIRLNYFFAMAYNAVAIPVAAGVLYPSLRIKLPPWVAGTCMALSSVSVLQNLYSKFNLFFVELSSI 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1514 1019 PRINTS P-type cation-transporting ATPase superfamily signature 697 711 - -
Lele33g1514 1019 PRINTS P-type cation-transporting ATPase superfamily signature 824 835 - -
Lele33g1514 1019 PRINTS P-type cation-transporting ATPase superfamily signature 533 547 - -
Lele33g1514 1019 PRINTS P-type cation-transporting ATPase superfamily signature 899 918 - -
Lele33g1514 1019 PRINTS P-type cation-transporting ATPase superfamily signature 922 934 - -
Lele33g1514 1019 PRINTS P-type cation-transporting ATPase superfamily signature 846 856 - -
Lele33g1514 1019 FunFam Copper-transporting ATPase 1, putative 465 587 - -
Lele33g1514 1019 ProSitePatterns Heavy-metal-associated domain. 58 88 IPR017969 GO:0046872
Lele33g1514 1019 PRINTS Copper-transporting ATPase 1 signature 53 78 - -
Lele33g1514 1019 PRINTS Copper-transporting ATPase 1 signature 79 102 - -
Lele33g1514 1019 PRINTS Copper-transporting ATPase 1 signature 108 128 - -
Lele33g1514 1019 FunFam Probable copper-transporting ATPase HMA5 804 956 - -
Lele33g1514 1019 ProSiteProfiles Heavy-metal-associated domain profile. 53 119 IPR006121 GO:0046872
Lele33g1514 1019 FunFam Copper-exporting P-type ATPase 779 830 - -
Lele33g1514 1019 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 29 1002 - -
Lele33g1514 1019 SUPERFAMILY Calcium ATPase, transmembrane domain M 430 971 IPR023298 -
Lele33g1514 1019 Gene3D - 51 122 - -
Lele33g1514 1019 CDD HMA 56 118 IPR006121 GO:0046872
Lele33g1514 1019 CDD HMA 139 200 IPR006121 GO:0046872
Lele33g1514 1019 FunFam Copper-exporting P-type ATPase A 135 204 - -
Lele33g1514 1019 ProSitePatterns E1-E2 ATPases phosphorylation site. 699 705 IPR018303 -
Lele33g1514 1019 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 411 1004 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lele33g1514 1019 Gene3D - 664 956 IPR023214 -
Lele33g1514 1019 SUPERFAMILY Calcium ATPase, transduction domain A 497 583 IPR008250 -
Lele33g1514 1019 CDD P-type_ATPase_Cu-like 348 1004 - -
Lele33g1514 1019 Gene3D - 706 830 IPR023299 GO:0000166
Lele33g1514 1019 Pfam Heavy-metal-associated domain 56 116 IPR006121 GO:0046872
Lele33g1514 1019 Pfam Heavy-metal-associated domain 140 200 IPR006121 GO:0046872
Lele33g1514 1019 Gene3D - 465 587 - -
Lele33g1514 1019 ProSiteProfiles Heavy-metal-associated domain profile. 137 203 IPR006121 GO:0046872
Lele33g1514 1019 SUPERFAMILY HAD-like 696 1005 IPR036412 -
Lele33g1514 1019 SUPERFAMILY HMA, heavy metal-associated domain 50 123 IPR036163 GO:0046872
Lele33g1514 1019 Pfam E1-E2 ATPase 478 676 - -
Lele33g1514 1019 TIGRFAM TIGR00003: copper ion binding protein 139 200 IPR006122 GO:0005507
Lele33g1514 1019 TIGRFAM TIGR00003: copper ion binding protein 54 117 IPR006122 GO:0005507
Lele33g1514 1019 FunFam Copper-exporting P-type ATPase A 50 120 - -
Lele33g1514 1019 ProSitePatterns Heavy-metal-associated domain. 142 171 IPR017969 GO:0046872
Lele33g1514 1019 SUPERFAMILY HMA, heavy metal-associated domain 139 207 IPR036163 GO:0046872
Lele33g1514 1019 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 779 978 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele33g1514 1019 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 450 740 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele33g1514 1019 Pfam haloacid dehalogenase-like hydrolase 693 913 - -
Lele33g1514 1019 Gene3D - 138 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1514 Lele-ChrLele33 25453847 25460490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1514 1 995 Primary Pumps ATPases AT5G44790 69.824 0.0 1411