Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1496 ATGATCATTCGCATGGTGTGTGATTTTTTTTCCCTTTTATTGGATTTTTCAATTTCTGTTGTCCGAACAAGTGCAGGAGGCAAATTAAGTCCAGAAATGTATGAGCATACATCATCCTTTGATTCCAACACAATGGCAGATGGCACTGTTTCCCTAAAAGACGGCCTTCCCGATGCGCCGCCGCTCATGGCTGCCGGCAACCTCACCGGCAGTAACAATGGCTTGGACGAAAATCTCAAGCTCACTGTGGAAGAGCTCTACTATCACCAGCACCGGCATCAGAATCATCCACCACCGCTGCACCCAGAAGACGTCTTGGCCTTTGCTAACGGCGTCACCGCCGCACCATTGGACCTCTCGCACCCTCAACATTTTGTTCTGAACGTAGAAAACTCGTACCACAATGAGAATTTGGTTCATCAAGTCATCGATGTCCTCAATTATGATCAATCCACTTGGGACCCTAAAGTTCAAGAGTTGCAGGGCGTGGGCTATTCTAATCACCACCACGAACAACAGCAACCCCAACAATTTCATCAAATTGAGACCCCAAGCTACAATTCTTCTTTCATTCTCGACCCTCCTCCTCCTTGCCCTTCTTCTAATCTCCTCGATCTCCTCCATTACAACCCAGCCCAGAAGATACCCAATATCCCAAATTCCACGGGATTTCTAAGCGACATTCCGATAGGATCAGATAACACAAGCGCGTGCTCTGTCTTGTATGATCCTATGCTTCATTTGAATCTGCCTCCACAACCTCTAGCTCTAAGAGAGCTGTTTCAGTCTCTTCCTCGAGGCTATAGCTTGCCAACTAGTTCCAGAAATGATTCTTTTTTTGGTGGAGGGGACGAGACAGAGGGGAATGGGATTGTGTATCAGGATGGAGATGGAAGCCAGCTTGAAAATGGAGTTTTGGAATTTGACAGAGGAACTGCTCGTGTGGGCAAAGGAAGACAAGGAAAAGGCACCAAGCATTTTGCCACTGAGAAACAAAGAAGAGAGCAACTTAATGGCAAATACAATGTATTGAGGAGTCTGATCCCAAACCCCACCAAGATAGATAGAGCATCTGTGGTGGGAGACGCCATTAACTATATTAAAGAGCTGATGAGAACAGTGAATGAGCTGAAATTGTTGGTGGAGAAGAAAAGATTTGGGATGGACAGGTGCAAGAGGCACAAACCTGAAGATGATGCTGGAGAGAGCTGTAACATGAAGCCGTATGGTGATCATCCAGAAGGATGCATAAGGACTTCATGGCTACAGAGGAAATCCAAAGACACCGAGGTTGATGTCCGAATCATCGACGATGAAGTCACAATCAAACTTGTTCAGAGGAAGAAGATCAGCTGCTTGCTGTTTGTCTCCAGGGTTCTTGATGAACTCCAGCTGGATCTTCACCATGTTGCAGGTGGACATGTTGGTGAATATTGCAGTTTCTTGTTCAACAGCAAGATATGTGAAGGTTCTTCAGTGTATGCAAGCGCCATAGCCAACAAGGTGATTGAGGTTTTGGACTGGCAGTATGCAGCAGCTGTTCCACATACTACCACTCCACCCACAGATATATTAGGTAACAAGTTCGCTTGGTTGCCGTCTAGTGTTGTGTCACCGGAGAAGGAGACGGAGGAGAGTGTGAGGATGGAAGCGACGACTTCATCGGCAGCCACTGTCAAAGTGTCATCGATTTTCATATACCCAATCAAGTCATGCCGTGGGATTTCAGTTCCTCAAGGACCCATCACGCCTACTGGATTTCGATGGGATCGACAATGGTTGGTGGTGAACTCAAAGGGGAGAGCATACACTCAAAGAGTTGAACCTAAGCTTGCTTTAGTGACGGTAGAACTGCCAAGTGAGGCATTTCATGAAGGATGGGAACCTACAAAGAACTCATATATGGTGTTAAAAGCACCTGGTATGGAAGCTCTCAAGATTTGTCTGAGTAGACCACAGGGAGTAGCAGATGGTGTCTCAGTGTGGGAATGGTCTGGCTCTGCATTGGATGAGGGAGATGAAGCATCAAAATGGTTCTCAGATTACATAGGAAAACCTAGTCGACTGGTCCGCTTCAATACTGAGTCAGAAACTAGAGTTGTGGATCCTGATTATGCCAACGGGCACAATATCATGTTTTCTGATTGCTTCCCATTCTTGTTGTCATCGCAGGGGTCGCTGGATGCACTCAACAAGCTTCTCAAGGAGCCCATACCTGTTAATCGATTTAGGCCTAATATCGTTGTTGAAGGCTGTGAACCATTTTCTGAGGACACATGGACAGAGATCAAGATAGGCAAATTTTCATTTCAGGGTGTGAAGCTGTGCTCCCGTTGCAAGGTACCTACGATCGATCAGGATACTGGGATTGCAGGAAATGAACCAACCGAAACTCTGAAGAGTTATAGGTCAGATAAAGTCCTAAGGCCTAATGGAAAACAGCAGAATAGGGTCTATTTTGGGCAGAGTTTGGTGTGGAAAGATTATTACATAGCAGGAAATGAGAAAATACTTAAAGTGGGCGATCCTGTTTTTGTCCTCCATAAGGTCTCAACTGCTGATGAAGCAGCTGCTTGA 2577 0.4594 MIIRMVCDFFSLLLDFSISVVRTSAGGKLSPEMYEHTSSFDSNTMADGTVSLKDGLPDAPPLMAAGNLTGSNNGLDENLKLTVEELYYHQHRHQNHPPPLHPEDVLAFANGVTAAPLDLSHPQHFVLNVENSYHNENLVHQVIDVLNYDQSTWDPKVQELQGVGYSNHHHEQQQPQQFHQIETPSYNSSFILDPPPPCPSSNLLDLLHYNPAQKIPNIPNSTGFLSDIPIGSDNTSACSVLYDPMLHLNLPPQPLALRELFQSLPRGYSLPTSSRNDSFFGGGDETEGNGIVYQDGDGSQLENGVLEFDRGTARVGKGRQGKGTKHFATEKQRREQLNGKYNVLRSLIPNPTKIDRASVVGDAINYIKELMRTVNELKLLVEKKRFGMDRCKRHKPEDDAGESCNMKPYGDHPEGCIRTSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKISCLLFVSRVLDELQLDLHHVAGGHVGEYCSFLFNSKICEGSSVYASAIANKVIEVLDWQYAAAVPHTTTPPTDILGNKFAWLPSSVVSPEKETEESVRMEATTSSAATVKVSSIFIYPIKSCRGISVPQGPITPTGFRWDRQWLVVNSKGRAYTQRVEPKLALVTVELPSEAFHEGWEPTKNSYMVLKAPGMEALKICLSRPQGVADGVSVWEWSGSALDEGDEASKWFSDYIGKPSRLVRFNTESETRVVDPDYANGHNIMFSDCFPFLLSSQGSLDALNKLLKEPIPVNRFRPNIVVEGCEPFSEDTWTEIKIGKFSFQGVKLCSRCKVPTIDQDTGIAGNEPTETLKSYRSDKVLRPNGKQQNRVYFGQSLVWKDYYIAGNEKILKVGDPVFVLHKVSTADEAAA 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1496 858 SUPERFAMILY PK beta-barrel domain-like 557 790 IPR011037 -
Lele33g1496 858 Gene3D - 318 389 IPR036638 GO:0046983
Lele33g1496 858 ProSiteProfiles MOSC domain profile. 687 847 IPR005302 GO:0003824|GO:0030151|GO:0030170
Lele33g1496 858 SUPERFAMILY MOSC N-terminal domain-like 561 701 - -
Lele33g1496 858 Pfam Helix-loop-helix DNA-binding domain 324 370 IPR011598 GO:0046983
Lele33g1496 858 SMART finulus 327 376 IPR011598 GO:0046983
Lele33g1496 858 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 321 370 IPR011598 GO:0046983
Lele33g1496 858 PANTHER TRANSCRIPTION FACTOR BHLH91 33 513 IPR045895 GO:0006355|GO:0048658
Lele33g1496 858 CDD bHLH_AtMYC1_like 326 387 IPR045896 -
Lele33g1496 858 Pfam MOSC domain 709 844 IPR005302 GO:0003824|GO:0030151|GO:0030170
Lele33g1496 858 Pfam MOSC N-terminal beta barrel domain 560 686 IPR005303 -
Lele33g1496 858 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 323 390 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1496 Lele-ChrLele33 25323853 25330303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1496 165 515 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 42.520 3.88e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele33g1496 MOSC 2.7e-29 No_clan