Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1495 ATGAATTTCTCAATTGGAGGTGGTGGGAATGGGAATGGGAATGGGAGTGGGAGTGGGAGTGGGAGTGGGAATGGTAAAGGCCCTAACAATCCTGGCAATAGAGGAAGAAAGATGCACCATCGCCACACTCCCTTTCAGATAACACAACTTGAAGCGTTTTTCAAGGAGAACCCTCATCCCGATGAAAACCAACGACGCCAGTTAGGCAGGGAGCTGGGGCTTGATTCAAGACAAATCAAGTTTTGGTTTCAGAACAAGAGAACTCAAACAAAGACTCAACATGAGAGGGAAGATAATGCAATGCTTCGGGCTGAAAATGAAAGGATGAAATGTGAGAATATAGCCATCAAAGAGGCACTGAAGGACATGATTTGCCCCTCTTGTGGGGGTCCTCCCTTTGGGGAAGGTGAACTTGGCCGTACTGTCCATGATCTGCACCAAGAGAATCTTCGACTGAAACAACAGTATGACAGAATATCGAACATACTCGCAATGTGCATTGGCAGACCAATATCAGAACCAGAATCCTCTGTGGATCCTTCCTCCTCGACTGGATCTCCGCTGCCGGATCTGTCACCGGGAAATTCCCTGAACCTAGAGAGTATAGGTAGCCCCATTAATCTTGACATGGACTTAGGTTCAGCTATCACAGTTTCAGATGAGAACATGTTCCCGTCCTTAATGGGAGAAGTCACAGACGTGGAAAAGGATCTGATGATAGAGGCTGCTCATAACGCCATGGATGAATTGCTGAAGCTTATGCCTAATGATGAGCCCTTATGGGTGAAGACTTCCATTGGTGGCCAACGTGTTCTTCATCGTGAGACCTATGAAAGGATATCTCCTAGGGCTAATCACTACAGAAGTTCCTATGCTCGTAGAGAAGCATCGAAAGATTCACGAATCGTTTGGATGAATGCCATGCAGTTGGCCCACATGTTCTTAGATCTGGAAAAGTGGCTCAATCTGTTCACCACAATTGTTAGGAAAGCTGAAATACTTGAAGTGCTTGATGTAGGACAATCATCAAACCGTTCTGGAGCTTTGCAGCTGATGTGTGAAGAGATGCACATTCTGTCCCCATTGGTTGCATCTCGAGAATTCTGCTTCATTCGATACTGTCAACAAATTGACGTAGGTGTGTGGATAATAGCTGACGTGTCATTCGATTCCTTAAGAGACAACATCCCTATCTCTCGTACTTGGAAGTTCCCTTCTGGTTGCATCATTCATCAGATGCCCAATGGCTTCTCCAAGGTTACTTGGATTGAACATGTGGAGGTGGACGACAAGAGCCATACACACAGGCTGTTCAGAGATCTTGTTGCGGGTAATCTTGCTTATGGAGCTGAAAGATGGGTCGTTACACTTCAAAGAATGTGCGAGCGATTTGTGTTTGCGTACGATGAAAGTATCCCAACCGAACAAACTCGGAAAGTGACGAGTTATGGAGGTGCAAGGAGGAGGTTCATGGAGCTTACTAATCGAATGGTGAAGGACTTCTGTCAAGCTCTGGACATGTCAAGGAAGGAGTCCCCTGATTTATGCGAAGTGAATAACAGCGGGATTAGGGTTTCTGTTAGGAGCAACAGAGAAAGAGGTCAGCCTGAAGGCATGGTTATTACTGCGTCAACCTCTCTCTGGCTGCCAGTTTCCCATAAAACTGTTTTTGAATTCCTCAACGACGACAAAAGACGAGATAAGTGGGATGTGCTTTCCAACGGAAACACAGGGATTCATCAAATCGGATACATCTCCAGTGGAACCCATTCTGACAACTGCATCAAAATTATGCAGCCTACCATGCCAGATGAGAGCGGTGTGCTGATTCTTCAAGAAACTTGCACTGATAGCTTGGGATCTATGCTTGTGTATGCTCCCATTGACATGCCGCTGATAAATATGTGTGGGAGGGGAACAATCGACCTTTCGCTGGTGCCGATCCTTCCGTCGGGCTTCGTGATCTCGGGCGACGGTCACCGGCGTCATACAGGCCCGTTTTTCGCTGGAGAATCTAGCAGCTCATCGAGCTTGACTGAAGGCGGCTCATCATCCTCATCTGTAGGAAGTCTTCTGACAGTGACTTTCCAGATTCTGGTTTGCAGAAATGACGAAGTGAGGCAACTGAACGTTGAAACTGTGTCAACAATCAACTCGCTCCTCAACTCAACTGTCGAGAAGATTAAGGATGCTTTCAACTGTGGAGGCCTCGATTAA 2217 0.4659 MNFSIGGGGNGNGNGSGSGSGSGNGKGPNNPGNRGRKMHHRHTPFQITQLEAFFKENPHPDENQRRQLGRELGLDSRQIKFWFQNKRTQTKTQHEREDNAMLRAENERMKCENIAIKEALKDMICPSCGGPPFGEGELGRTVHDLHQENLRLKQQYDRISNILAMCIGRPISEPESSVDPSSSTGSPLPDLSPGNSLNLESIGSPINLDMDLGSAITVSDENMFPSLMGEVTDVEKDLMIEAAHNAMDELLKLMPNDEPLWVKTSIGGQRVLHRETYERISPRANHYRSSYARREASKDSRIVWMNAMQLAHMFLDLEKWLNLFTTIVRKAEILEVLDVGQSSNRSGALQLMCEEMHILSPLVASREFCFIRYCQQIDVGVWIIADVSFDSLRDNIPISRTWKFPSGCIIHQMPNGFSKVTWIEHVEVDDKSHTHRLFRDLVAGNLAYGAERWVVTLQRMCERFVFAYDESIPTEQTRKVTSYGGARRRFMELTNRMVKDFCQALDMSRKESPDLCEVNNSGIRVSVRSNRERGQPEGMVITASTSLWLPVSHKTVFEFLNDDKRRDKWDVLSNGNTGIHQIGYISSGTHSDNCIKIMQPTMPDESGVLILQETCTDSLGSMLVYAPIDMPLINMCGRGTIDLSLVPILPSGFVISGDGHRRHTGPFFAGESSSSSSLTEGGSSSSSVGSLLTVTFQILVCRNDEVRQLNVETVSTINSLLNSTVEKIKDAFNCGGLD 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1495 738 MobiDBLite consensus disorder prediction 1 40 - -
Lele33g1495 738 MobiDBLite consensus disorder prediction 173 197 - -
Lele33g1495 738 ProSiteProfiles 'Homeobox' domain profile. 33 93 IPR001356 GO:0003677
Lele33g1495 738 ProSiteProfiles START domain profile. 232 466 IPR002913 GO:0008289
Lele33g1495 738 SUPERFAMILY Homeodomain-like 18 93 IPR009057 -
Lele33g1495 738 SUPERFAMILY Bet v1-like 233 463 - -
Lele33g1495 738 MobiDBLite consensus disorder prediction 666 688 - -
Lele33g1495 738 Pfam Homeodomain 36 91 IPR001356 GO:0003677
Lele33g1495 738 SMART START_1 241 463 IPR002913 GO:0008289
Lele33g1495 738 MobiDBLite consensus disorder prediction 1 29 - -
Lele33g1495 738 FunFam Homeobox-leucine zipper protein HDG1 22 109 - -
Lele33g1495 738 CDD START_ArGLABRA2_like 236 462 - -
Lele33g1495 738 Pfam START domain 243 463 IPR002913 GO:0008289
Lele33g1495 738 MobiDBLite consensus disorder prediction 668 688 - -
Lele33g1495 738 CDD homeodomain 36 94 IPR001356 GO:0003677
Lele33g1495 738 Gene3D - 25 111 - -
Lele33g1495 738 MobiDBLite consensus disorder prediction 175 197 - -
Lele33g1495 738 Gene3D - 240 438 IPR023393 -
Lele33g1495 738 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 36 733 IPR042160 -
Lele33g1495 738 SUPERFAMILY Bet v1-like 487 660 - -
Lele33g1495 738 SMART HOX_1 35 97 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1495 Lele-ChrLele33 25311713 25318550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1495 33 733 Homeobox Transcription Factor Family AT1G73360 43.916 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele33g1495 START 3.7e-35 CL0209