Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1488 ATGTTAGACGTTCCCGGTTCAGGTCGTGATTCCGAGCTTAGTTTAGAGGCTCTAAGTTCAACCCAGCGTAGTTCCATGAGCAGCGAAAGTATTTGCAGCACCAGTTTCAGCCGTCTCTCCTTCGAGCTCCTGCCTACTTCGCCTGACAGCCTCTCCCTCAAGCCTCATCGCTCGTCCGACTTTGAATACTCCGCCATACGCTCCGCCACGTTCCGCCGCAAAACCGGTCTCACTTTCCGCGACTTCCATCTCCTCCGCCGCATCGGCGCCGGTGACATCGGAACCGTCTACCTCTGCCGGCTGCGCAACAACAGTGCTGCCGCCGATGACGATCGGTTCGTCGCCGGCGCGGAGGACGACGTCGTTGGCGACCGCGAGGATGATGGTTACTGCCTTTACGCCATGAAGGTAGTGGACAAAGACGCGGTAGCATTGAAGAAGAAATCAGAGAGGGCGGAGATGGAGAGGAAGATTTTGAAGATGCTGGATCATCCTTTCCTCCCTACGCTTTACGCTGAGTTCGAGGCTTCACACTTCTCTTGCATTGTTATGGAGTTCTGTTCTGGTGGGGACCTGCACTCCCTACGCCATAGACAGCCTCAGAAACGATTCCCTCTTTCCTCTGCAAGGTTTTATGCTGCAGAAGTTCTCGTGGCATTGGAGTACCTTCACATGTTGGGAATTATATACAGAGATCTGAAACCTGAAAATGTGTTGGTTAGATCCGACGGTCATATCATGCTCTCCGATTTTGATCTCTCCATGTGTTCAGACGCAATCCCGGCCGTTGAATCCTCTGACTTCTCTCCCGTAACTGCATTACCAGACACCTTAACATACACTCGCTCGCGCTCTAATCCCTTTATCTCGTGCCTCCCGAATCGGTTTTTCCGCTCCCGCAAGGCACCCACGAATACGTCTCGCCGGAAGTCGCATCCGGCCACTCTCACGGCAACGCCGTTGACTGGTGGTCCTTTGGAATATTCATCTACGAGCTCATGTCTGAACTTGGCGTTGATACGGATGATGACGCCACCTGAGGTTCCAGGTTCGAGGAGGCAGAAGACGATGCCTTTAGGTGGTCAGCTGAAGGCAAACGGAAGTAGGACTACTGGTAGGAGACAGCAGAGGCAGCATCCAACGGCGTCCTTTGACTACTTCTGA 1164 0.5352 MLDVPGSGRDSELSLEALSSTQRSSMSSESICSTSFSRLSFELLPTSPDSLSLKPHRSSDFEYSAIRSATFRRKTGLTFRDFHLLRRIGAGDIGTVYLCRLRNNSAAADDDRFVAGAEDDVVGDREDDGYCLYAMKVVDKDAVALKKKSERAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHRQPQKRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSMCSDAIPAVESSDFSPVTALPDTLTYTRSRSNPFISCLPNRFFRSRKAPTNTSRRKSHPATLTATPLTGGPLEYSSTSSCLNLALIRMMTPPEVPGSRRQKTMPLGGQLKANGSRTTGRRQQRQHPTASFDYF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1488 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Lele33g1488 387 Pfam Protein kinase domain 125 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1488 387 SMART serkin_6 82 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1488 387 PANTHER FLIPPASE KINASE 1-RELATED 22 320 - -
Lele33g1488 387 Gene3D Transferase(Phosphotransferase) domain 1 187 255 - -
Lele33g1488 387 MobiDBLite consensus disorder prediction 1 21 - -
Lele33g1488 387 MobiDBLite consensus disorder prediction 361 387 - -
Lele33g1488 387 FunFam protein kinase PINOID 2 80 186 - -
Lele33g1488 387 MobiDBLite consensus disorder prediction 345 387 - -
Lele33g1488 387 MobiDBLite consensus disorder prediction 300 324 - -
Lele33g1488 387 FunFam protein kinase PINOID 187 255 - -
Lele33g1488 387 Gene3D Phosphorylase Kinase; domain 1 80 186 - -
Lele33g1488 387 ProSiteProfiles Protein kinase domain profile. 82 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1488 387 SUPERFAMILY Protein kinase-like (PK-like) 59 258 IPR011009 -
Lele33g1488 387 MobiDBLite consensus disorder prediction 308 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1488 Lele-ChrLele33 25260553 25262464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1488 10 270 AGC Kinase Gene Family AT2G34650 68.679 1.95e-115 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele33g1488 Pkinase 7.7e-30 CL0016