Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1474 ATGAGACTCTCTTCAGCTGGTTTTGCTCCTTCACCCCAAGAAGGAGAAAAGCGAGTTCTAGATTCTGAGCTTTGGCATGCTTGTGCTGGCCCTCTTGTTTGCCTGCCAGCTGTTGGAAGCCGCGTCGTCTACTTCCCCCAGGGTCACAGTGAACAGGTTGCTGCATCAACTAACAAGGAGGTGGATGTCCATATTCCCAACTACCCAAGCTTACCTCCCCAACTTATTTGTCAGCTTCATAATGTCACTATGCATGCTGATTCAGAGACAGATGAAGTATACGCTCAGATGACCTTGCAACCTCTGAATCCTCAAGAACAAAAGGAGGCATACCTTCCAGCAGAGTTGGGCACTTCCAGTAAACAGCCAACGAACTACTTCTGCAAAACTTTGACTGCTAGTGACACTAGCACTCATGGGGGATTCTCTGTTCCTCGTCGGGCTGCTGAGAAAGTGTTTCCTCCACTGGATTTCTCTCAGCAGCCTCCTGCTCAAGAATTGATTGCACGGGACTTGCATGGTAACGAATGGAAATTCAGACATATCTTCCGGGGCCAGCCTAAACGACATCTACTTACAACAGGATGGAGTGTCTTTGTAAGTGCTAAAAGGCTTGTTGCTGGTGATTCTGTGCTGTTTATGTGGAATGGCAAGAATCAATTGCTTCTTGGTATTCGACGTGCAAATCGACCACAAACAGTGATGCCATCATCAGTGCTCTCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCGCATGCAGCTGCAACAAACAGCCGTTTCACCATTTTCTACAACCCACGTGCTAGCCCATCTGAATTTGTCATACCCCTAGCAAAGTATGTTAAAGCTGTGTATCATACCCGAGTTTCAGTGGGCATGCGCTTCCGGATGTTGTTTGAAACAGAGGAATCAAGTGTCCGGCGATACATGGGCACAATCACTGGCATTAGTGACCTGGATCCTGTGAGGTGGCCAAATTCACATTGGCGATCAGTTAAGGTTGGCTGGGATGAGTCCACTGCAGGAGAGAGGCAACCCAGAGTGTCCTTGTGGGAAATTGAGCCATTAACGACATTTCCAATGTATCCTTCCTCATTCCCTCTGAGGCTTAAACGACCGTGGCCTACTGGACTGCCTTCTTTCCACGGTATGAAGGATGATGATTTGGGTGTGAATTCTCCACTGTTCTTGGATAGAGGACTTCAGTCTCTTAATTTTCCTGGAATCGGGGTTACTCCTTGGATGCAACCAAGGTGCGATCCTTCTTTTCTGAATCTGCAAACCGATATGTACCAAGCCATGGCCACTGCCGCCCTTCAGGATATAAGGACTATAGATCCTTTGAAACAGCATGTGTCATCGCTGCTTCAGTTTCAGCAACCACAGAACTTCCCCAACAGGACTGCTGATTTAGTGCAGGCCCAGATGATGCAGCGCTCTCAACCTCAGCAAGCTTTTCAAAATAATCAAGAGAATATGCATCCATCTCAATCCGAGGCTCTAAGTCAGACTCATCTTCAGCATCAAAACCCTTTTGTTAATCAGCACCAGCAGCCACAACAGCATCATAAACAGCGAAGTTTTTCTGATCAGCAGATTTCACATACTGTCTCTACAATGTCTCAGTTTGTTTCTGCACCTCAACAACCTCAGTCACCACCGACACAAGCTATTTCTTCGGTGTGCCATCAACCAAGTTTTTTTGATTCAAATGGGAACAGTGTAACTACTACTGGAATGGTTTCTCCACTGCATAGTATTTTGGGTTCATTTCCCCAAGAAGAACCTTCTCACCTTCTCAATATTCCTAGTACAAGTTCTTGGATACCTGTTCAACCTTCTACTCCTACTGCTACTTGGCCTTCCAAGCGTGTTGCTGTGGACCCTCTTCTTTCTTCTGGAGCTTCTCAATGTGATCTGCCTCACATGGATCAGTTAGGGCAGCGCCAGAATACATTGTCTCAAAATGCAGTTACTTTGCCACCCTTTCCCGGAAGGGAGTGCTCAATTGACCAAGAAGGGAGCACTGATCCTCAAAACCATCTTTTATTTGGCGTTAATATAGAGCCCTCGTCTCTTTTAGTGCATAACGGGATGTCAGGCCTTAAGGGGGTTAGCAACAACGTTGATTCCACAACCATACCTTTTCAGTCTTCTAATTACCTGGATGCTAGAGGCACTGAATCTACGTTGAATTCTGCAATGTCACAAACCATTGGTGAATCAGGATTCCTGCAGTCCCCAGAAAATATGGGCCAAGGAAATTCTCCTAATAAAACCTTTGTAAAGGTTTACAAGTCAGGGCCCTTTGGAAGATCGTTGGATATCACTAAATTCAGCAGCTACCATGAGCTGCGGCGTGAGCTCGCTCTTATGTTTGGCCTTGAAGGCGAGTTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTCGTTGACCGAGAGAACGATGTTCTTCTCCTTGGTGATGACCCTTGGCCGGAATTCGTCAACAGCGTATGGTGTATCAAGATACTTTCCCCACAAGAAGTGCAACAAATGGGCCATAATGGCCTGGAGCTCCTGAATTCGGTTCCGATTCAAAGACTTTTGAACGGCACATGTGAAGGCTTTGTGAGCCGACAGGACCCAAGAAGTTTAAGCTCTGGGATCACAACTGTGGGTTCTCTAGACTACTAA 2688 0.4673 MRLSSAGFAPSPQEGEKRVLDSELWHACAGPLVCLPAVGSRVVYFPQGHSEQVAASTNKEVDVHIPNYPSLPPQLICQLHNVTMHADSETDEVYAQMTLQPLNPQEQKEAYLPAELGTSSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFMWNGKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLKRPWPTGLPSFHGMKDDDLGVNSPLFLDRGLQSLNFPGIGVTPWMQPRCDPSFLNLQTDMYQAMATAALQDIRTIDPLKQHVSSLLQFQQPQNFPNRTADLVQAQMMQRSQPQQAFQNNQENMHPSQSEALSQTHLQHQNPFVNQHQQPQQHHKQRSFSDQQISHTVSTMSQFVSAPQQPQSPPTQAISSVCHQPSFFDSNGNSVTTTGMVSPLHSILGSFPQEEPSHLLNIPSTSSWIPVQPSTPTATWPSKRVAVDPLLSSGASQCDLPHMDQLGQRQNTLSQNAVTLPPFPGRECSIDQEGSTDPQNHLLFGVNIEPSSLLVHNGMSGLKGVSNNVDSTTIPFQSSNYLDARGTESTLNSAMSQTIGESGFLQSPENMGQGNSPNKTFVKVYKSGPFGRSLDITKFSSYHELRRELALMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQQMGHNGLELLNSVPIQRLLNGTCEGFVSRQDPRSLSSGITTVGSLDY 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1474 895 MobiDBLite consensus disorder prediction 479 562 - -
Lele33g1474 895 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Lele33g1474 895 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele33g1474 895 Gene3D - 125 228 IPR015300 -
Lele33g1474 895 FunFam Auxin response factor 757 851 - -
Lele33g1474 895 Gene3D - 758 851 - -
Lele33g1474 895 Gene3D - 291 363 - -
Lele33g1474 895 FunFam Auxin response factor 291 363 - -
Lele33g1474 895 SMART B3_2 127 229 IPR003340 GO:0003677
Lele33g1474 895 ProSiteProfiles PB1 domain profile. 762 846 IPR000270 GO:0005515
Lele33g1474 895 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Lele33g1474 895 SUPERFAMILY CAD & PB1 domains 755 837 - -
Lele33g1474 895 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Lele33g1474 895 FunFam Auxin response factor 125 229 - -
Lele33g1474 895 CDD B3_DNA 126 227 IPR003340 GO:0003677
Lele33g1474 895 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 851 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1474 Lele-ChrLele33 25161008 25165887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1474 1 479 B3 DNA Binding Superfamily AT1G30330 86.364 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele33g1474 AUX_IAA 2.6e-07 CL0072