Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1465 ATGCTGTCAAACCGTGTTGTAAAATTCTTGCGAGCTTTAGTGGTGGTGCCCACTCGTGATCTTGCCTTACAGGTCAAAGAAGTTTTTGACGCCATTGCGTCTCCATTAGGTTTACGTATTGGCTTGGCTGTTGGTCAATCTTCAATAGATGATGAGATTTCTAAGCTTGTGGATATACTAGGATATGAGGTAGGCATGTGTTATGATCCGGAAGATATATCTCTCAATTACCAACTTGGCTTCCGAAGGTTCACACTTGAGCATCTTTATTATCTTGTAGTTGATGAAACAGATCGGCTTCTCCGGGAGGCCTACCAATCCTGGTTACCTACCGTGTTGGAACTAACTCGATCTCAGGACAAGAATATTTATCTACCAGCTGGTTCATTTCTTCTTAATTCATTTAGTTCATTAAGCACTAGAACGAGATGTGGGCCTGAGAGGGGATTTAAAGATAAACCTTACCCCAGGTTGGCAAAAATGGTTCTATCTGCAACAATAACCCAGGACCCAGGAAAGCTTGTTCAACTTGATCTACATCGCCCAATTTTCTTGAAAGCTGGGCAAATGCGTTATAGGCTTCCAGAAAATTTGGAATCACTTAAAGTGATATGCGAAACGAAGGTCAAACCCTTGTATTTAGCCGCCCTTTTAAAAACATTGGGAGGAGAAAAATGCATAGTTTTTACGAAATCTGTGGATTCAACACATCGTCTGTGCAAATTACTGAACTATTTCAGTGATCTTCAAATTAAGATAAAGCAATATTCTAGTCTTCAACCTCAACGTATAAGAAGTAAGACATTGAAGGAATTTCGGAAAGGGGAGTTTCAAGTGCTTGTGTCTTCTGATGCGATGACTCGTGGAATGGATGTTGAAGGGGTGAGAAATATTGTTAATTATGACATGCCGAAATACATAAAGACTTATATTCATCGAGCTGGTAGGACAGCAAGAGCTGGGCAGACTGGGCGTTGCTTCACACTGATGTCCAAAGATGAGGCTAGACGATTTAAGAAGTTGTTGCAGAAAGCTGATAACAGTTCTTGCCTTGATCACACTCTGCCCTCCACTTTGATCGAAGAACTTCACGCTACTTACCAATCAGCGCTGAAAAGATTTAAAGAGACAATTTCAGAAGCCCGAAAGGAGAAACCCAAGAGCAGTTCGAGTATATAG 1179 0.4114 MLSNRVVKFLRALVVVPTRDLALQVKEVFDAIASPLGLRIGLAVGQSSIDDEISKLVDILGYEVGMCYDPEDISLNYQLGFRRFTLEHLYYLVVDETDRLLREAYQSWLPTVLELTRSQDKNIYLPAGSFLLNSFSSLSTRTRCGPERGFKDKPYPRLAKMVLSATITQDPGKLVQLDLHRPIFLKAGQMRYRLPENLESLKVICETKVKPLYLAALLKTLGGEKCIVFTKSVDSTHRLCKLLNYFSDLQIKIKQYSSLQPQRIRSKTLKEFRKGEFQVLVSSDAMTRGMDVEGVRNIVNYDMPKYIKTYIHRAGRTARAGQTGRCFTLMSKDEARRFKKLLQKADNSSCLDHTLPSTLIEELHATYQSALKRFKETISEARKEKPKSSSSI 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1465 392 Coils Coil 364 384 - -
Lele33g1465 392 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 185 IPR014001 -
Lele33g1465 392 Pfam DEAD/DEAH box helicase 11 173 IPR011545 GO:0003676|GO:0005524
Lele33g1465 392 Gene3D - 197 391 IPR027417 -
Lele33g1465 392 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 213 363 IPR001650 -
Lele33g1465 392 CDD SF2_C_DEAD 203 329 - -
Lele33g1465 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 343 IPR027417 -
Lele33g1465 392 SMART helicmild6 237 321 IPR001650 -
Lele33g1465 392 PANTHER RNA HELICASE 10 365 - -
Lele33g1465 392 Gene3D - 2 196 IPR027417 -
Lele33g1465 392 Pfam Helicase conserved C-terminal domain 210 321 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1465 Lele-ChrLele33 25091551 25095536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1465 11 336 Eukaryotic Initiation Factors Gene Family AT3G13920 22.552 1.10e-18 85.5