Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1454 ATGGAGGAGGATGGGATTCAAGCACAAGCGTGTAAATTCCCAAGAATTGAAAATGGAAGTGCCAGAAACGATTCCTCCAACAACCACAAGATAGGTTCCAATAATATCAACGAAGAAAATGGAGAGCTCAGAAAAAGAAGTGGTGGCGGAGGTGGAGGCAGCGATGGAAGCAGCAACCGATTTCACAGTTGGCACCATCACTCTTCTCGAATCATTAGGGTTTCTCGTGCCTCCGGTGGGAAAGATCGGCACAGCAAGGTAATGACTTCCAAGGGTTTAAGAGACCGAAGGGTTCGTCTCTCTGTGACCACAGCGATTCAATTCTATGACCTTCAAGATCGTCTGGGTTATGACCAACCTAGTAAAGCTGTGGAATGGTTAATCAAAGAAGCTTCTGATGCAATTTCTGAGCTTCCTTCTCTGAGCAACACGTTCCCTGAGACCCCAAAGCAACCCAGTGATGAGAAGAGAGGAGGTGATCAGAAATGTATCGATTCAGTTGATGCAGAAGGAGATGGTGAAGCGAGTTTTCACCAGCAGAATCAGAATCAAAGTCAGAATCTTTCCATGTCTAAGTCTGCTTGCAGTAGCACATCGGAGACGAGCAAAGGCTCCGGTTTGTCGCTTTCGAGGTCGGCGATTCGGGTCAAGGCCCGTGAGAGGGCGAGGGAGAGAGCCGCGAAGGAGAAGGAGAAAGAGAATGATGAATCTTGCAATAATATTGCTCATCATCCCCAGAATAATAATAATAATGTGATCTCCATGGCTCAGACTTCTTTCACTGAGCTTCTCACTGGTGGGATAAACACCAGCGTTGCTGCGAATACTAGTCCGACCGGGTCGGGTCAACAGAATAATCATCATCATCGGAGTGATGAGGCTGATCTGTTCAACAAAGGAACTAGACATCAATGGAGTATAGCGCCTATGGACTACTTTGGCGCGGGGCTTCTGGGAGATCCAATTGGGGAACAATCTTCCTCAGGCAATGTCGATTGCACCATTCGGAGTCCAAAGTGA 1020 0.4745 MEEDGIQAQACKFPRIENGSARNDSSNNHKIGSNNINEENGELRKRSGGGGGGSDGSSNRFHSWHHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKEASDAISELPSLSNTFPETPKQPSDEKRGGDQKCIDSVDAEGDGEASFHQQNQNQSQNLSMSKSACSSTSETSKGSGLSLSRSAIRVKARERARERAAKEKEKENDESCNNIAHHPQNNNNNVISMAQTSFTELLTGGINTSVAANTSPTGSGQQNNHHHRSDEADLFNKGTRHQWSIAPMDYFGAGLLGDPIGEQSSSGNVDCTIRSPK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1454 339 MobiDBLite consensus disorder prediction 150 172 - -
Lele33g1454 339 Pfam TCP family transcription factor 79 232 IPR017887 -
Lele33g1454 339 MobiDBLite consensus disorder prediction 271 291 - -
Lele33g1454 339 ProSiteProfiles TCP domain profile. 80 138 IPR017887 -
Lele33g1454 339 ProSiteProfiles R domain profile. 212 230 IPR017888 -
Lele33g1454 339 MobiDBLite consensus disorder prediction 1 92 - -
Lele33g1454 339 MobiDBLite consensus disorder prediction 214 239 - -
Lele33g1454 339 MobiDBLite consensus disorder prediction 76 92 - -
Lele33g1454 339 MobiDBLite consensus disorder prediction 138 250 - -
Lele33g1454 339 MobiDBLite consensus disorder prediction 271 285 - -
Lele33g1454 339 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 292 IPR005333 GO:0003700
Lele33g1454 339 MobiDBLite consensus disorder prediction 175 209 - -
Lele33g1454 339 MobiDBLite consensus disorder prediction 19 38 - -
Lele33g1454 339 Coils Coil 216 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1454 Lele-ChrLele33 25003962 25005043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1454 41 318 TCP Transcription Factor Family AT4G18390 48.239 1.17e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele33g1454 TCP 1e-40 No_clan