Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1447 ATGAGGAGGAACTGCAACTTAGAACTCCGTCTCTTCCCTTGTCACGATTCCGGCCACAGTAATCACCAGCACCACAACATAATGTCGGGAGAAGGCAATGATAATGAGAGTGAGATGAGTCCAGAGGATCAGCAACAGAAGCTCACCATTTTCTATGATGGCAAAGTCTGCGTTTCTGATGTCACCGACCTTCAGGCGAGGAGGATAATGAAGGAAGCAGGGAAAGAGATGGAGGAGAAAATGAAGAGATCATTATCATTCCCATCATCCTCACCGCAGAATCAGAGTCCGATGTGTAACCCTAACACTGCCCTTTCCATGAAGAGATCTCTCCAACGTTTCCTTCAGAAGCGCAAGGATCGCATCCACGAATCTTCCCCTTACTATAATCCTTAA 396 0.4672 MRRNCNLELRLFPCHDSGHSNHQHHNIMSGEGNDNESEMSPEDQQQKLTIFYDGKVCVSDVTDLQARRIMKEAGKEMEEKMKRSLSFPSSSPQNQSPMCNPNTALSMKRSLQRFLQKRKDRIHESSPYYNP 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1447 131 MobiDBLite consensus disorder prediction 84 105 - -
Lele33g1447 131 ProSiteProfiles Tify domain profile. 41 75 IPR010399 -
Lele33g1447 131 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 26 129 IPR040390 -
Lele33g1447 131 Pfam tify domain 43 73 IPR010399 -
Lele33g1447 131 MobiDBLite consensus disorder prediction 20 43 - -
Lele33g1447 131 Pfam Jas motif 108 129 IPR018467 -
Lele33g1447 131 SMART tify_2 41 75 IPR010399 -
Lele33g1447 131 MobiDBLite consensus disorder prediction 75 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1447 Lele-ChrLele33 24957717 24959301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1447 1 130 Tify Gene Family AT1G30135 43.382 1.17e-25 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele33g1447 tify 4.3e-12 No_clan