Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1434 ATGAGAGTCCAAGTCTCGAATGTAGCCCAAGGTAATCTTCATGGAATAACAAACCAGGCTTGCTGGTGGGGACAGAGGTACTCTGATGATAGAGAAAGAGATAATGGAATAGGTCCTACATCTTATATCTCCATTACAAGAGAACATCCGTACCTGGCTGGTGTGCTGCTGTTTAAGTCCAAAAGAGAGCAAGAGAGACAAGAACGCGTAGCAGAAGAGCACAGCACAGCTCCCAATATTGAAGGGGGCGAAGTTTTTGTATGTGTTGGGTTTCGTAGATCTGGTTGTAAGTTTATGTTTGTGATGTATCAAGCAAAGACTGTTCCTAATTCAAGTCTAGTTGGCAGCAATTTATTAGTTCATGGTCAGCATTTAGATTGCGGTCGTAGTGCAATGGATCCTCTCAATGGAGGTAACAATCCTACCCACAACTCTAATCTCAGCTCGAAGCAACGTTTACGCTGGACACATGAGCTGCATGAACGTTTTGTTGATGCTGTAGCACAACTTGGTGGGCCAGATCGTGCCACACCTAAAGGTGTCCTCAGAGTTATGGGTGTGCAAGGCTTAACAATATATCATGTCAAAAGCCATTTACAGAAATATCGACTTGCAAAGTACCTCCCTGATTCCTTGTCCGATGCTGAAAAGAAAGAAACAGGGGACATGCTTTCCAATCTAGATGGCGCTTCTGGTGAGATGCAAATTACTGAAGCACTGAAGCTACAGATGGAGGTGCAGAAGCGACTGCATGAACAATTAGAGGTTCAGAGACAACTTCAACTACGGATAGAAGCTCAGGGTAAATACCTGAAGAAGATAATCGAAGAGCAGCAGTGGCTCAGTGGAGTTCTGTCAGACTCACCTTCACCTTGCTCAGGTGTTGATGCTCCGGCATCGGCTGATGGATGTCAAGAACCTGAGAATAAGACTGACCCGGCTACTCCGGCTCCAACCTCTGAGTGCCCCCTCCTAGATAAAGCAGCAAAAGAACGCACCCCAGCAAAGAGCCTGTCTATCGATAAATCGTTCTCGTCTCACCACGAACCATTGACTCCGGATTCTGGTTGCAATGCCGGGTCGCCTATTGACAGCCCTAGAGGGGAGAGACTGACGAAGAAGCACCGGGTAAGCATGGAGGGAGCATATTCTAAATCAGAAATGATTCTTCCACCCCAGATACTAGAATCAAGCATGCCACCATACCAGCAGTCAAACAAAGTTTTCCTTACCGGAGAGCAGTTTGATCCTTCATTGGGTATATCTACTACGAGTGAGGAGGCATTACAAAAGGTTGGGGGCAGCAATCTGTGA 1314 0.4635 MRVQVSNVAQGNLHGITNQACWWGQRYSDDRERDNGIGPTSYISITREHPYLAGVLLFKSKREQERQERVAEEHSTAPNIEGGEVFVCVGFRRSGCKFMFVMYQAKTVPNSSLVGSNLLVHGQHLDCGRSAMDPLNGGNNPTHNSNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSLSDAEKKETGDMLSNLDGASGEMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQWLSGVLSDSPSPCSGVDAPASADGCQEPENKTDPATPAPTSECPLLDKAAKERTPAKSLSIDKSFSSHHEPLTPDSGCNAGSPIDSPRGERLTKKHRVSMEGAYSKSEMILPPQILESSMPPYQQSNKVFLTGEQFDPSLGISTTSEEALQKVGGSNL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1434 437 MobiDBLite consensus disorder prediction 338 352 - -
Lele33g1434 437 MobiDBLite consensus disorder prediction 286 374 - -
Lele33g1434 437 Pfam MYB-CC type transfactor, LHEQLE motif 234 279 IPR025756 -
Lele33g1434 437 Gene3D - 149 208 - -
Lele33g1434 437 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 141 426 IPR044848 GO:0003700
Lele33g1434 437 FunFam Myb family transcription factor 149 207 - -
Lele33g1434 437 Pfam Myb-like DNA-binding domain 153 203 IPR001005 -
Lele33g1434 437 SUPERFAMILY Homeodomain-like 148 204 IPR009057 -
Lele33g1434 437 Coils Coil 237 257 - -
Lele33g1434 437 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 147 207 IPR017930 -
Lele33g1434 437 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 150 205 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1434 Lele-ChrLele33 24844081 24851395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1434 185 437 G2-like Transcription Factor Family AT2G01060 61.628 2.79e-89 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele33g1434 Myb_DNA-binding 3.3e-08 CL0123