Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1429 ATGGATGAAAGAGTATCAGTGTTACTGGTTCTTGTTTTCGCCTTTTTTCTGGTTGCAGAAGCAGAAACAGTTCATGAGGATTTTATAGCTCTGAAGTCTCTTATGGATACATTGAAGAACACTCCTGCTAGTTGGTCGGGATCGGATCCTTGCAATGATCGTTGGGATGGAATCAAGTGCACCAACTCTCGTGTTACTTCGATAAAATTATCAAACACAGATTTGAAAGGCCAGCTATCAGGAGATATTGGTTTACTATCTGAATTAGAAACACTGGATCTCTCTTACAACAAGGGCTTAACTGGTTCACTTCCTCCAGAAATTGGAAACTTGCAGAAACTGTCCAACTTGTTTCTTGTTGATTGTAGTTTCACTGGTCCTATTCCAGATAATATAGGATCCCTGCAGCAGCTTGTTTTCTTATCTTTGAATGAAAACAAATTTTCCGGGAAAATTCCTGCTTCAATTGGTAATCTGTCAAAACTTACTTGGCTAGATTTAACTGAAAATGATCTTGAAGGACCCATCCCAGTATCAAGTGGCAGTATGGCTGGTCTTGATAAGCTACTCAATGCAAAGCACTTTCATCTTGGAAAGAACAAGCTTTCAGGAAAAATCCCCCCTCAGCTTTTTGTCTCAGAAATGACTCTAATTCATGTGCTTTTGGACAACAATAAACTTACAGGCAACATTCCTTTAACACTTGGACTTGTTCAGACTCTGGAGGTGATGCGCTTTGACAATAATTCCTTAAGTGGAGACTTGCCTCAAAACATCAACAATCTCAAGAATCTTCAGGAGATGTACTTGTCCAACAATAAGCTGTCTGGTCCTATTCCAAGCATGAGTGGAATGAACTTGCTCACATACCTTGATATGAGCAACAATAGCTTTGATCGTTCAGATTTTCCACCATGGCTTCCTACTCTAAGGAATTTAACAACATTAAAGATGGAGGGCACTCAACTTACAGGGGAGATTCCTGCTTCTTTCTTCAGTCTTGTCCATTTACAGAATGTGGTGCTAAATCGTAATAATCTCAATGGCTCCTTGAACCTTGGCACCACCTACGGCAAGCAACTGAAACGAATTGAGTTGCAGTATAACGAAATTGACAAATTTGAGCAACAAAATCTTGTCTCCAAAATTAAGATAATACTGGTGAACAATCCTATTTGCTATGAAGGGAAAGAAACAAGAAGTTACTGTTCTGATGTGCCAGCCAATATAACATATACAGAACAACCACCAAGTTTTTGCCCTCCTGTTACCTGCAGATCAGAACAGAATCTCAGTCCACACTGCAAATGTGCATATCCATTCATGGGAATTTTAAGTTTCAGAACACCTTCGTTCCCAGACTGGCAAAAATATGCTCACTTTGAGGAACTTCTAATGCGTGATTTTAAAGCTAAATATCTACCTGTCGATTCAGTTTCTCTAAAAAATCTGATCCAGAATCAATTTCAAGATGTTGAATTGAGCTTGCTAGTGTTCCCTTCAAGTGAAGATCATTTCAACAGAGCTGAGATTTCTAGTATAACTTCTCTGCTAAGCAACCTGACCACTTATCCATGCTATTTCTTTCCATACCCTTATGGACACTATGAAGAACCTATGGAATCAAGTAAATCGTCAAATGTTGCTTTGATAACTGGAGCAATTGTTGGTTGTTCTGTTGTTCTGGTCTTAATACTTTTTGCTGGGATTTATGCTTTCTACCAAAAGAAAAGGGCAGAAAAAGCAATTTCTCAAAGCAATCCTTTTGGACGACGGGCATCTAGTGACAACAAAATTATGACCCCTCAATTGAAAGGAGTAAGGCAATTCTCTTCTGCAGAGGTTAAGAGATACACCAGAAATTTTTCTCAAGACAATGTTATCGGATGTGGGGGTTATGGAAAGGTTTATAAAGGGACACTTCCGAATGGGAAACTAGTAGCCATAAAAAAAGCTGAAAAAGAATCTAAGCAGGGAGGGCTTGAGTTTAAAGCTGAGATTGAACTTCTGTCAAGGGTCCACCATAAGAATCTTGTAAGCCTTGTGGGGTTTTGCTTTGAGCGAGGAGAACAAATGCTGGTTTATGAGTATGTCCCTAATGGAACTTTGTATGATACTATCTCAGGAAAATCAAGACTTAGATTAGACTGGCCCAGAAGGCTAAAGGCAATCCTTGGTGCTGCTAGAGGTTTAGCTTATCTTCATGATCACGCAAATCCTTATATCATACATAGGGACATAAAGTCAAGTAACATCCTGCTGGATGATCGCTTAAATGCTAGAGTAGCTGATTTTGGGATTTCAAAGAATATGGTTGATTGTGACAAAGATCATATCACCACTCAAGTTAAAGGAACAATGGGCTACTTAGATCCAGAATACTACACAAGTCAGCATTTGACCAAAAAGAGCGATGTTTACAGCTTTGGAGTTTTGATGCTGGAGATGATAACAGCAAGAAAACCTATAGAAAAAGGGAAATACATTGTGAAAGTGGTTAGGAATTCAATTGATAGAACAAAGGAGTTATATGGTCTTGAAGAAATTATTGACCCAGTCATTGGTTCAGAATCAACACTGAAGGGTTTAGGGAAGTTTGTGGATCTCTCGATGAAGTGTCTTCAAGAGACTCGTGCTGACAGGCCTTCAATGAACGAAGTGGTAAAAGAAATTGAAAGCATTTTATATATAACTGGTTTGAACAACGCTTCTGGATCAATAGCATCTCCTTCATCTAGTTATGATGAGATAACAAGTGGGGTTTCTCAGAATCTTTACAGCAATAACTCCTTTGATTCAGGGGCAGTACCCCTGCAACCAAAAATTGAGCCTAAGCAAGTCATATGTACAATTTATCTAAGGTGCTGCACCACTCAGTCACCGGCTCACCAGCCTCCGCCGCCTCCACCGCTGAGTTCCCCCCGCATTGAGTCCCAAACCCACCCTACCAACTCTGTTCAGCGCCTCCATTTGTGGCACTCCTCGATCTCACTATCACCATCATCTTTCCGGCAGGAAAGGAATGTTGAATAG 3033 0.3996 MDERVSVLLVLVFAFFLVAEAETVHEDFIALKSLMDTLKNTPASWSGSDPCNDRWDGIKCTNSRVTSIKLSNTDLKGQLSGDIGLLSELETLDLSYNKGLTGSLPPEIGNLQKLSNLFLVDCSFTGPIPDNIGSLQQLVFLSLNENKFSGKIPASIGNLSKLTWLDLTENDLEGPIPVSSGSMAGLDKLLNAKHFHLGKNKLSGKIPPQLFVSEMTLIHVLLDNNKLTGNIPLTLGLVQTLEVMRFDNNSLSGDLPQNINNLKNLQEMYLSNNKLSGPIPSMSGMNLLTYLDMSNNSFDRSDFPPWLPTLRNLTTLKMEGTQLTGEIPASFFSLVHLQNVVLNRNNLNGSLNLGTTYGKQLKRIELQYNEIDKFEQQNLVSKIKIILVNNPICYEGKETRSYCSDVPANITYTEQPPSFCPPVTCRSEQNLSPHCKCAYPFMGILSFRTPSFPDWQKYAHFEELLMRDFKAKYLPVDSVSLKNLIQNQFQDVELSLLVFPSSEDHFNRAEISSITSLLSNLTTYPCYFFPYPYGHYEEPMESSKSSNVALITGAIVGCSVVLVLILFAGIYAFYQKKRAEKAISQSNPFGRRASSDNKIMTPQLKGVRQFSSAEVKRYTRNFSQDNVIGCGGYGKVYKGTLPNGKLVAIKKAEKESKQGGLEFKAEIELLSRVHHKNLVSLVGFCFERGEQMLVYEYVPNGTLYDTISGKSRLRLDWPRRLKAILGAARGLAYLHDHANPYIIHRDIKSSNILLDDRLNARVADFGISKNMVDCDKDHITTQVKGTMGYLDPEYYTSQHLTKKSDVYSFGVLMLEMITARKPIEKGKYIVKVVRNSIDRTKELYGLEEIIDPVIGSESTLKGLGKFVDLSMKCLQETRADRPSMNEVVKEIESILYITGLNNASGSIASPSSSYDEITSGVSQNLYSNNSFDSGAVPLQPKIEPKQVICTIYLRCCTTQSPAHQPPPPPPLSSPRIESQTHPTNSVQRLHLWHSSISLSPSSFRQERNVE 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1429 1010 FunFam Leucine-rich repeat family protein 26 182 - -
Lele33g1429 1010 Pfam Leucine rich repeat 240 297 IPR001611 GO:0005515
Lele33g1429 1010 CDD STKc_IRAK 628 894 - -
Lele33g1429 1010 Gene3D Phosphorylase Kinase; domain 1 592 697 - -
Lele33g1429 1010 Gene3D Ribonuclease Inhibitor 183 283 IPR032675 -
Lele33g1429 1010 SUPERFAMILY L domain-like 59 397 - -
Lele33g1429 1010 MobiDBLite consensus disorder prediction 961 975 - -
Lele33g1429 1010 Pfam Leucine rich repeat N-terminal domain 30 60 IPR013210 -
Lele33g1429 1010 FunFam Leucine-rich repeat receptor-like protein kinase 596 697 - -
Lele33g1429 1010 ProSitePatterns Protein kinases ATP-binding region signature. 628 651 IPR017441 GO:0005524
Lele33g1429 1010 Pfam Protein kinase domain 623 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1429 1010 SUPERFAMILY Protein kinase-like (PK-like) 598 891 IPR011009 -
Lele33g1429 1010 PANTHER RECEPTOR-LIKE PROTEIN 55 32 894 - -
Lele33g1429 1010 MobiDBLite consensus disorder prediction 959 984 - -
Lele33g1429 1010 FunFam Leucine-rich repeat protein kinase family protein 183 281 - -
Lele33g1429 1010 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Lele33g1429 1010 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 698 906 - -
Lele33g1429 1010 SMART serkin_6 622 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1429 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Lele33g1429 1010 ProSiteProfiles Protein kinase domain profile. 622 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1429 1010 Gene3D Transferase(Phosphotransferase) domain 1 698 903 - -
Lele33g1429 1010 Gene3D Ribonuclease Inhibitor 284 411 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1429 Lele-ChrLele33 24809122 24816925 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1429 1 945 Receptor kinase-like Gene Family AT5G49760 51.405 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele33g1429 Pkinase 1.2e-47 CL0016