Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1426 ATGGGTGAGAGAAAGGTGCATGAAATGCTCTCTCTGCCTCTTCTTCTCAACTTCTTGTTGCTTTCAGTTGCAGAACCAGCATCCATGGAGGATGTGAGCGCCCTAAATTCTCTGAAGAACCTAATGCGAACCGTACCCCAAAGTTGGGAGAGTTCGGATCCTTGCAATGGCTGGGAGGGAGTTACCTGCACCCTATCACGTGTTACTTCCATAAAATTAGCAGGCATGGATTTAAATGGCCAGCTTTCTGCAGATATTGGATCCATCTCCGAGTTACAGGCTTTGGATCTCTCTTACAATAAATACCTAGGAGGACCACTTCCAAAAGAAATTGGAAATTTGAAGAAGCTGGAGGAATTATTTCTTGTTGATTGTGGTTTCACTGGTCCTATTCCAGATGAAATTGGATCACTACTAGAGCTTACCTATCTATCTTTAAACTCAAACAGCTTTAGTGGAAGAATTCCAGCTTCCATTGGCAATCTATCAAAAATGCGACGGCTAGACTTAACTGATAATCAACTTGTTGGACCTCTTCCAGTATCATCAAGTGGAGCTACTTCTGGTTTAGATATGCTACGCTATGCACTGCACTTTCATCTTGGGGACAACCACCTCTCAGGAGATATTCCTCCAGAACTTTTCAGCTCAAATATGGCTCTGATACATTTGGTCTTGAATAGCAATAACCTGACCGGCAAAATTCCCGATTCACTTGGACGTGCTCAAAATCTTACGGTGGTGCGCTTGGAAAATAATTTTTTGACTGGCTTTGTACCTCAGAACCTAACTCACCTCCACAATGCTACAGACCTGATCCTGTCCAACAATAATCTGTTGGGTACCATTCCAAACCTCAGTGGAATGACTGCTCTCCAGTACTTGGATATGAGCAACAATAGCTTTGAGCCATCTGAATTTCCATCATGGCTTCAAAATTTACCATGGTTAAAGTCACTAAAAATGGAGAACACGAATCTTAAAGGGAAGATACCTGCTGCTTTTTTTAGTCTAGCCAATTTAAATACTGTGGTTCTGAAAGACAATAAACTCAGTGGAAGCCTGGACATTGGCACCAACTACAGCAAACAACTGCAACTGATTGATTTGCAGAATAATAATATTGAGGATTTTCACAAACAAGATGAAGCCTTTGGGATCACAATTATACTCGTGGGCAACGATGCTTGTTATGAAGCTGGTTCTGAAACAAGCACCCTCTGCACCTTTCATGATAAACCACCTGCAGAATTGCCCAAGAACTGTGTGCCTGTTAAATGCAGTTTCCCAAATCAGATTTCTAGTCCCAATTGCGAATGCTCATATCCATATGAAGGAACATTTTCTTACATAGCTCCTTCTTATGTGATAAACAAAACTGCCCTCGAGGGAATTCTTTTGGAAAAGTTCCAATCATGTCAACTACCTGTGGACTCTGTTTCTGTGTTTAATCCACCTTGCTCTCCATTTCAGTGTTTAAAAGTCACCGTACAAATCTTCCCTTCAGGCCAGGACCACTTCAGCCAAACAATGATATCTAAAATAAGCGTGCTGCTAAGTAATCTCAGTACAATTGAAGCATATACTTTCATTCTTGGTCTTGATAAATATGAACTTCAAAGTCCAAGTAAGTCATCAAACACCAGAATCATAATTGGAGCTGCAGTTGGTGGTTCTGTGTTGCTTGTGCTATTTCTCCTAGCAGGTGTTTATGCTTTTTGCCAAACAAGAAGAGCAGAAAAAGCAATTGAAGAAAGCAATCCATTTGGACACTGGGATCTAAGTCACGAAAGTAGTACAAAACCTCAGTTACATGGAGCAAGGAGGTTCTCTTTCAAAGAACTTAAAGCATACACAAACAATTTTTCACAAGCCAATGAGATTGGATCTGGGGGTTATGGGAAGGTTTCTCGGGGAACTCTTCCCAATGGACAACTGGTTGCAATTAAACGAGCTCAGAAACAATCAAATCAAGGGGGACTTCAGTTTAAAGCTGAGATTGAACTCCTTTCAAGAGTCCACCATAAGAATCTGGTTAGCCTTGTGGGATTCTGCTTCGAGCGAGGAGAACAAATGCTAGTTTATGAATTTGTTCCTAATGGAACCTTGAAGGAAAGCATCTCAGGGAAGTCCGGTATAAGATTGGACTGGACTAGAAGGTTAAAAATAGCCCTTGGTACTGCAAGGGGTTTGGCTTATCTCCATGAACATGCCAATCCTCCTATTATACATAGAGACATTAAATCAACCAACATTTTGCTGGATGAACACTTGAATGCAAAAGTTGCCGATTTCGGTCTTTCCAAGCCTATGGACAATTCTGAAAAAGATCATGTTACTACACAAGTTAAAGGAACAATGGGCTACTTGGATCCGGATTATTACACAACTCAACAGTTGACTGAGAAAAGTGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGCTGATAACTGCAAGAAAACCAATACAAGGAGGGAAGCATATTGTGAAAGTATTTAGGAGTACAATTGATAAGACAAGAAACTTTCATGGCCTTCAAGAAATTCTTGACCCAGCTCTTGTTGGCTTAGGCTCCCCATTGATGGAACTGGAGAACTTTGTTGATCTTGCAATGATGTGTGTCGAGGATTCAGGAGCCGACCGACCGACGATGAGCGATGTGGTGAAAGGAATAGAAAGCCTGTCGAAATCTGCTAGTTTGAACACTATAGCTGAAGCGTCAGCATCTAATTCAGCTAGCTTTGAGGAGGTAAGTAATGTGACTTCACAGCTTGTTCTCAACAGCAATGAGTCTTTGGATTCAAGTTAG 2811 0.4123 MGERKVHEMLSLPLLLNFLLLSVAEPASMEDVSALNSLKNLMRTVPQSWESSDPCNGWEGVTCTLSRVTSIKLAGMDLNGQLSADIGSISELQALDLSYNKYLGGPLPKEIGNLKKLEELFLVDCGFTGPIPDEIGSLLELTYLSLNSNSFSGRIPASIGNLSKMRRLDLTDNQLVGPLPVSSSGATSGLDMLRYALHFHLGDNHLSGDIPPELFSSNMALIHLVLNSNNLTGKIPDSLGRAQNLTVVRLENNFLTGFVPQNLTHLHNATDLILSNNNLLGTIPNLSGMTALQYLDMSNNSFEPSEFPSWLQNLPWLKSLKMENTNLKGKIPAAFFSLANLNTVVLKDNKLSGSLDIGTNYSKQLQLIDLQNNNIEDFHKQDEAFGITIILVGNDACYEAGSETSTLCTFHDKPPAELPKNCVPVKCSFPNQISSPNCECSYPYEGTFSYIAPSYVINKTALEGILLEKFQSCQLPVDSVSVFNPPCSPFQCLKVTVQIFPSGQDHFSQTMISKISVLLSNLSTIEAYTFILGLDKYELQSPSKSSNTRIIIGAAVGGSVLLVLFLLAGVYAFCQTRRAEKAIEESNPFGHWDLSHESSTKPQLHGARRFSFKELKAYTNNFSQANEIGSGGYGKVSRGTLPNGQLVAIKRAQKQSNQGGLQFKAEIELLSRVHHKNLVSLVGFCFERGEQMLVYEFVPNGTLKESISGKSGIRLDWTRRLKIALGTARGLAYLHEHANPPIIHRDIKSTNILLDEHLNAKVADFGLSKPMDNSEKDHVTTQVKGTMGYLDPDYYTTQQLTEKSDVYSFGVLMLELITARKPIQGGKHIVKVFRSTIDKTRNFHGLQEILDPALVGLGSPLMELENFVDLAMMCVEDSGADRPTMSDVVKGIESLSKSASLNTIAEASASNSASFEEVSNVTSQLVLNSNESLDSS 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1426 936 Pfam Leucine rich repeat N-terminal domain 30 63 IPR013210 -
Lele33g1426 936 SUPERFAMILY Protein kinase-like (PK-like) 608 901 IPR011009 -
Lele33g1426 936 ProSiteProfiles Protein kinase domain profile. 622 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1426 936 Gene3D Ribonuclease Inhibitor 192 383 IPR032675 -
Lele33g1426 936 Gene3D Phosphorylase Kinase; domain 1 592 697 - -
Lele33g1426 936 FunFam Leucine-rich repeat family protein 30 184 - -
Lele33g1426 936 SUPERFAMILY L domain-like 36 380 - -
Lele33g1426 936 CDD STKc_IRAK 628 895 - -
Lele33g1426 936 FunFam Leucine-rich repeat protein kinase family protein 591 697 - -
Lele33g1426 936 Gene3D Transferase(Phosphotransferase) domain 1 698 919 - -
Lele33g1426 936 Gene3D Ribonuclease Inhibitor 29 191 IPR032675 -
Lele33g1426 936 SMART serkin_6 622 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1426 936 Pfam Protein kinase domain 623 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1426 936 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 698 908 - -
Lele33g1426 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Lele33g1426 936 FunFam Leucine-rich repeat protein kinase family protein 186 285 - -
Lele33g1426 936 PANTHER RECEPTOR-LIKE PROTEIN 55 38 895 - -
Lele33g1426 936 ProSitePatterns Protein kinases ATP-binding region signature. 628 650 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1426 Lele-ChrLele33 24792375 24803137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1426 12 918 Receptor kinase-like Gene Family AT5G49760 51.518 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele33g1426 Pkinase 2.4e-46 CL0016