Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1424 ATGAGTTTCAGTCACAGCCATAGCCACGACGATACCACGACGACGACCACAGCCGCAACCACCGCGAAGCTCGACGACGGTCACGAGCTCGACATGGTGATGCCGGGGTTCCGATTTCACCCGACAGAAGAAGAACTCGTGGAGTTCTACCTTCGCCGTAAAGTTGAGGGAAAGCGTTTCAACGTTGAGCTCATTACTTTCCTTGATCTTTATCGCTACGACCCCTGGGAGCTTCCAGCTCCTAAAGGTATCAGAACCAGCTGGATCATGAACGAGTATCGCTTACCTCACCACGACACTGAACGATACCAAAAGGCTGAGATATCGCTGTGTCGAGTGTACAAAAGACCAGGAGTAGAAGACTATCCTTCACTTCCTCGTTGTCTGCCAACAAGGCCATCTCCTTCCTCGCGAGCTTCTTCTCACTCTTCAGACAAGAGCATCAGTAAGCTCACCAACGACGTAGAATTTGTCGGACAAAGTACGATGATGACTAACTATAATCTTCAGTTAGGAAAAACCTCTTCAGATAATAATCAAGGTGTCTCTATAGCTCTTGGGCTTTCCAAAGTACAAAGCAATCCTACTCCTTCTTACCCTAATTCCTCAGCTTCAACAATGGCTCCTCCATTTCCATTAATTGAGGACGAAGAGTTACTGATGCTTACCAATATGCAGCCATTGATAATGAAGCAAACTCAAGCTTCTTCGTCCTCCTTCTTCCTCTCACCACCTGGTAATAATAATAATAATAATTCTTCAGCTTCTTCATGCAACGTGGAGGATCTTAATAGGTTGTTGAGTTATAATCAGCTGCAACAATACTTCAACAGTAACAATGCTGCTCCAAGCCATCATCAACAACAGCAACAACAGTTCTCTAATTTGTTGCTGCAGCCTCAACCACCAACGGCTCTGATGATCACTTCGTCGTCGTCGACCCTACCAACTTGGCTTCCATTAACAACACCGATGACGACGACGATGACAAACACCACCACCACGACCTTCTCTGATAAACTGTGCGAGTGGAATAATCTCATCCCTGCCGAGCCAAGTAATAACAGAGAGTACAGCAATATGTCCTTCAAGTAA 1095 0.4594 MSFSHSHSHDDTTTTTTAATTAKLDDGHELDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAPKGIRTSWIMNEYRLPHHDTERYQKAEISLCRVYKRPGVEDYPSLPRCLPTRPSPSSRASSHSSDKSISKLTNDVEFVGQSTMMTNYNLQLGKTSSDNNQGVSIALGLSKVQSNPTPSYPNSSASTMAPPFPLIEDEELLMLTNMQPLIMKQTQASSSSFFLSPPGNNNNNNSSASSCNVEDLNRLLSYNQLQQYFNSNNAAPSHHQQQQQQFSNLLLQPQPPTALMITSSSSTLPTWLPLTTPMTTTMTNTTTTTFSDKLCEWNNLIPAEPSNNREYSNMSFK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1424 364 Pfam No apical meristem (NAM) protein 35 81 IPR003441 GO:0003677|GO:0006355
Lele33g1424 364 Gene3D NAC domain 81 119 IPR036093 GO:0003677|GO:0006355
Lele33g1424 364 Gene3D NAC domain 42 80 IPR036093 GO:0003677|GO:0006355
Lele33g1424 364 SUPERFAMILY NAC domain 33 116 IPR036093 GO:0003677|GO:0006355
Lele33g1424 364 ProSiteProfiles NAC domain profile. 33 194 IPR003441 GO:0003677|GO:0006355
Lele33g1424 364 MobiDBLite consensus disorder prediction 1 23 - -
Lele33g1424 364 MobiDBLite consensus disorder prediction 124 148 - -
Lele33g1424 364 MobiDBLite consensus disorder prediction 131 148 - -
Lele33g1424 364 MobiDBLite consensus disorder prediction 238 258 - -
Lele33g1424 364 MobiDBLite consensus disorder prediction 1 22 - -
Lele33g1424 364 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 32 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1424 Lele-ChrLele33 24756645 24759138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1424 32 84 NAC Transcription Factor Family AT2G02450 92.453 5.41e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele33g1424 NAM 4.1e-11 No_clan