Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1400 ATGTCTGAGGATGCTAGCCCCATGCTTGTAGTTTATGATGATCCCTCAGACCAACGATCACTATCTTTGGATGATACAAGCAGCACAGAAGAATCACCAGATGAAACCAGGCTCTCATTGGAGACTACTAATGATTTGATTCCATATATTGGGCAGAGATTTAGCACTCATGATGCTGCATACGAATTTTATAGTGAATTTGCCAAGCGGTGTGGGTTCTCAATTCGACGACACCGTACAGAGGGAAAAGATGGTGTTGGAAAAGGACTAACTAGACGCTATTTTGTTTGCCATCGTGCTGGTAACACTCCTGTCAAAACATCAACTGAAAGTAAACCCCAAAGAAATCGAAAATCATCCCGATGTGGATGCCAGGCTTATATGCGTATAAGCAAAACAACAGAATTAGGTACTCCAGAATGGCGTGTTACTGGTTTTGCCAACCACCATAATCATGAACTTTTAGAACCAAATCAAGTTCGATTTCTTCCTGCATACAGAACTATTTCAGATTCAGACAAAAGCCGAATCCTGATGTATGCTAAAACTGGGATTTCTATCCATCAAATGATGCGGCTTATGGAGCTTGAGAAGTGTGTAGAACCTGGATATCTGCCTTTTACTGAAAAGGATGTGAGGAATTTACTTCAATCATTTAGGAAATTAGAACCAGAAGAGGAAAGCATAGATTTACTAAGAATGTGCAGAAATATTAAGGAGAAAGACCCTAATTTCAAATTTGAGTACACACTTGATTCGAACAACTGTCTGGAGAATATAGCCTGGTCATATGCTTCATCAATACAATCATATGATATCTTTGGTGATGCAGTGGTATTTGATACAACACATCGCCTAACTGCATTTGACATGCCATTGGGTATATGGGTTGGAATGAATAATTACGGAATGCCTTGTTTTTTTGGCTGTGTGCTTCTACGAGAAGAAAACTTACGGTCATATTCCTGGGCATTGAAGGCTTTCTTAGGGTTTATGAATGGGAAAGCTCCGCAGACAATATTAACAGACCAAAATATGTGTCTCAAAGAAGCATTAGCTATTGAAATGCCAGCAAGTAAACATGCTCTCTGCATATGGATGATTGTAGCAAAATTTCCTTCTTGGTTTAGTGCTGTTCTAGGAGAACGTTACAATGAATGGAAGGCTGAATTTTATAGGCTGTACAATCTTGAGTCAGTTGAGGATTTTGAACTAGGTTGGAGGGATATGGTCAGTTCTTTTGGGTTGCATGCCAGCAGGCATATTGCTAATTTATATACTTTACGTTCGCTTTGGGCATTGCCATTTCTGAGAAGCCATTTTTTTGCGGGAATGACTACCACTGGTCAGTCAAAGTCAATTAATGCTTTCATTCAGCGATTTCTGAGTGCACAGACCCGGCTTGCACACTTTGTGGAGCAGGTGGCTGTTGCTGTGGATTTCAAAGATCAAACTGGAGAGCAACAAACTATGCAACAGAATCTTCAAAATATTTGCCTTAAAACTGGGGCCCCCATGGAGTCACATGCTGCCACAATCCTCACTCCTTTTGCCTTTACAAAACTTCAGGAACAACTTGTGTTGGCTGCTCATTATGCATCTTTTCCATTTGAAGATGGTTTCCTTGTGAGACACCATACAAAAGCTGAGGGAGGTCGGAGAGTGTATTGGGCTCCCCGAGAAGGAATTATAAGTTGCAGCTGCCACCAGTTTGAGTTCTCTGGAATTCTTTGTCGGCATGCTCTTAGAGTTCTGTCAACAGGAAATTGCTTTCAGATCCCAGATAGATATCTTCCCTCTCGTTGGCGTCGAATCAGCATGACTTCTTCTAAGCTTCTTCAGAGTGCACCTAAGGATCATGCTGAAAGAGTGCAGTTATTACAAAACATGGTTTCTGCTCTTATCACAGAATCTGCTAAGTCAAAGGAAAGATTGGATATTGCGACAGAGCAAGTTTCCCTCCTTCTATCTCGAGTAAGGGAGCAACCAGTTTCATTAAAAGGTTTTAGAGATATTTCTGGCAATGGTAGGAATGCTTGA 2040 0.4098 MSEDASPMLVVYDDPSDQRSLSLDDTSSTEESPDETRLSLETTNDLIPYIGQRFSTHDAAYEFYSEFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSTESKPQRNRKSSRCGCQAYMRISKTTELGTPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDSDKSRILMYAKTGISIHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLEPEEESIDLLRMCRNIKEKDPNFKFEYTLDSNNCLENIAWSYASSIQSYDIFGDAVVFDTTHRLTAFDMPLGIWVGMNNYGMPCFFGCVLLREENLRSYSWALKAFLGFMNGKAPQTILTDQNMCLKEALAIEMPASKHALCIWMIVAKFPSWFSAVLGERYNEWKAEFYRLYNLESVEDFELGWRDMVSSFGLHASRHIANLYTLRSLWALPFLRSHFFAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNICLKTGAPMESHAATILTPFAFTKLQEQLVLAAHYASFPFEDGFLVRHHTKAEGGRRVYWAPREGIISCSCHQFEFSGILCRHALRVLSTGNCFQIPDRYLPSRWRRISMTSSKLLQSAPKDHAERVQLLQNMVSALITESAKSKERLDIATEQVSLLLSRVREQPVSLKGFRDISGNGRNA 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1400 679 Pfam MULE transposase domain 278 370 IPR018289 -
Lele33g1400 679 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 658 IPR031052 GO:0006355
Lele33g1400 679 SMART 26again6 564 591 IPR006564 GO:0008270
Lele33g1400 679 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Lele33g1400 679 Pfam FAR1 DNA-binding domain 62 155 IPR004330 -
Lele33g1400 679 Pfam SWIM zinc finger 555 587 IPR007527 GO:0008270
Lele33g1400 679 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1400 Lele-ChrLele33 24543383 24546427 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele33g1400 MULE 4.2e-18 CL0219