Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1397 ATGGAAACAAGCAGAGCCTGCTCCCCTGAACTTATGAAAACAAGCAGAGATGAGGGAAAGAGGAGCTTGATCATGTACAAGAAAGAGGAAGAGGAGGAGAAAGACGAAGACGACGACGATAAAGGAAAGATAGAGAGTGAATTAGGCTATCGAGTAGAACATGGCAGAAAGAGCCGGGTTATATCTGATGCATACAGCCAGAGAGTCCCCAAACCAGGAAGCTTGTCAGCGCCACCGAGTTGTCAGGTCGATGGTTGCCACGCTGATCTGAGCAACGCCAGAGCGTATCACCGGCGGCACAAGGTCTGTGAGCACCACGCTAAAGCACCGAAAGTACTCTTTTCAGGGCATGAGCAACGATTTTGCCAGCAATGTAGCAGGTTTCATGAGCTTTCAGAGTTTGACAACTCACAACGGAGTTGTAGAAGGCGTTTGGCATGGGATCTTCAAAAGCGTTTGGCACGGGCTCGTGAGAGACTTTCATCTGATTATCTTGGGAAAGCAGCCCCAGGTTCTCAGCTTGTTGCTCCTCTGACTCCAACACTGCCACCTACTCAGTCTCATGGACCTAGTGGCTCCGGCTCCATTAGGCCTGGTTTCATGGCTGGCACGGCTCTGATGGGCCACATACTCAAGCCGGATGTGGCGTTCAAATGCCCTCGCTGCCATTCCACCAACACTGAGTTTTGCTACTTCATCAACTGCGACCCCTCTCAGCCTCGCCATTTATGCAAAACCTGTAGAAGGTACTGGACCCGAGGGGGGACCCTGCGAAATGTCCCAGCCGGCGGGGGATGCCGGAGGAACCAGAGAAGTAAAGGAAGCAGCTCAAAGTCGCCACCGGTGAGCTCAGATCGCCAGACAGGCAGTGCTACTTCAACCACCTCTGCGTCTTCCAACAGTGCTTCTGCTTCGGATATAGTAGGCCAGGCCTACTATGGTTCGAGTAATCAAATGGGAGGAGTTGGTGACTTAAGTTCCATGTTCGATCATACTAAGATACCAGTTTCGATTCTCAATTTAGCTGCTGATCTTGCTATAAATCAACTGCTTCAAATCTTACTCTCTGGGGATGATCATTCACTTAACATTCGTCGTATCATGATTTGCACCAGAAATGATGATGAACGAAGACAAGTTTTTGAAAAACTGATGAAGGATATCGACAATATGCCTTGTTTTAATGAAATCTTTCATGAAGTCTTGTGGGTTGATGAGTCATTGTGTCAAAGCCAAGTAAACGTAAAGGCTCATGCTCAAAAACAAATCAATCTGCAGCTTCGCCAGCTTTCAGGGATCAGTCAGAGCAATCACCAAAGCATGATCAGAAAGAAATATTTAGTGCTTGGTTTTGATGGATATGATGAGAAAACTGTTGATATGGGGAAATTGAATTTGGCTGGAGGTGATGAGGCTATTATGGTGTTGATTACCACTGAATCTCGAAAGCAAGAAGAAAAGGATAAAGGAACAATAGCGATGGATCTGGCAATCAGTACAAATGATCATTTGTTGCCATGCAGAGTCTTTTGTCAAACTGTAGGCAATGAGCTTGTCTTTTCATCTAGTGCCCTCCAGGAAATTGCAGTACGCATAGTCCAAGAATGTGGTGGCCATCTTTTAGCCATTGTCCTTGTGGCGAAGTCATTGGAGAGTGTGAAGGATGTCAAACTCTGGGAACTTGCACTCAACAAATTGAGCTTCCTTAATCCTCCTTATGACATGAACATGTTTCAGGGCGTAAGCAGAGTTATGGTTACTACATTCATAAACTTCATCTGGAATGATATGAATCAAATACTAAAGCTATGCCTAACAAGTTGCTTATTCATTCCTCATATCAAAACTGGTAAGTTGTCAAATGAATTGATGCATCATTGGATTTCTTGGCAGTTAACGGATGATGGAGAAGGTCTGCATAACTTGACAGAGCTTGTAGAACGCTCTGTCTTAATCCAAGATCAATCAAATGATAAGTATGTCCGATTGCCGGAGGACATACATGCTATTTTGCATTCATTGAACACCCTAACCCCTTTGTTCATGAAGAAACCTGGACTAGGGTTGACGGAACCACCAAAGGATGAGGAATGGCATAGTGTTGTACATTTGGAACTTGCAAACAATAAACTATCTGAACTGCCTTTGTCTCCAAGCAGCCCTGAACTCAGAGTGTTAATGTTGCAGGGAAATGTTGATTTAACAAGAATCCCAAATACGTTTTTTGTTAAAATGCCCTTGCTTACGATCCTGGACTTATCTTACACTAGTGTACGAGAACTACCAGACTCTCTTTTTGAGTTGGAGCAGCTCAGAGAAATGTATTTGAAAGTCTGTGAATCTTACATGAAATTATCACCAAAAATTGGGAAATTGAAGAAACTGGAGAAGCTTGATCTTGAAGGAACTCAGATTATACATCTGCCAGAAGAGATTCAAGAGTTAACCAATCTCCAAAGCTTGTTCCTTTGCTTCTATGAATATCGTGGCAAAAAAGGTAAGCAATACACGTGCTCAAAAATTATTCCATCTCAGGTAATCTCAAAACTCAAGGGGCTAAAACATTTAAGTATTGATGTGAACCCTGATGACGAGCGGTGGTATGAGAATGTACAAGACATTCTTCCAGAAATATTGGGATTAGAGTATTTGCTGACTCTTAGCTTATACATCCCACATCTGGAAATTTTAAAGTTCATACCAAACCGTATAGCTCAGGTTGATTTTAAACTTATTGTTGGTAGGCATATGCAAAGGATCATATCAAGTACACCATCCACAGCTGAGGCAAAATTTAAACAAAGTGGTTGTAGCTTGAAGTTTGTAAATGGTGATCATGTCCCTAAAGAAATTAAAAGGCTTGCTAGGCACAGTAAGGCTTTATTTCTGGAGCGACACAAGACAATCAAGAATCTATCAGAATTTCAGATGATGAATCTAGAACAGCTGCGCGTATGTATTTTGGCAGAATGCAGAGAAATGCAAACCGTTGTTGATGGAAGACAATTGATTTGGGGTAATGAGATTTTCTCACATTTGTTATACTTGTACATATCGCACATGAAGAGTTTAAGAAGCATATGGGAAGGGCCAATGCCACCTCGCTGCTTTTTTGGTATGCTCAAGTCTTTAGTATTGCAAAATTGCCCTGAGTTAACAACTGTCTTTACCATGGATTTTCTTGGCAATCTTTCACTATTAAAGGAACTTATGGTTAAGGATTGTCCCAAAGTAACCACATTGATTAGTGATATGGTTAAGGATTGTCCCAAAGTAACCACATTGATTAGTGATGGATCATTCAAACATAAAGGAGAGGTTTTCCTGCCTAAATTGAGAAAGATAATGCTTCTCCATCTTCCTGAGTTGATCACCATTTCCAATGGATGTTACATAGGTCCAAGATTGAATAATATGGCAATTTATGATTGCCCAAAGCTCCAAAGCCTTTCTCGGTCGGAACTGTCAAGCCAAACTCTGAAGATCATTAAGGGAGAAATCAAGTGGTGGGACCAACTGCAATGGAGCAAAGAAGAATGGGGAATTTCGCAACGACCATCAAAGTTTGATCGCGTCTTTTCCTCAATTGATAATCAGGTTGATATAATGACTCAAATTTGGAATGATGATGATGACATTGACGATGCTGCAGATATAACGCCGCTTCAGACTATATTTGAGCTCCCAAAGCAAAGTGCTGATAATATCAGCAGAGTGACTTTTTCAGTGCCAATAGAAACGGCTGAACTCGGAGATTTTGTTTTAGATGATGGGTACAGGTGGAGGAAATATGGCCAAAAAACAATGGTTGGATCCAAAAATCCAAGAAGCTATTACAAATGTACTCATGTAGGTTGCCCGGTTAGAAAGTATTCACAACAATCTGAAAAAGACCCAAGAAAGATTGAAGTTTGTTACAACGGAATACACACGCACACAATCCCCCAGCCTAGAAGATCTCTCCATGAACTGCAGTCCACGGGGATAGAGGGTGCGCCACTGCAGTCTTCCAGTGTAACAAATGCCTCCATGAACAATCAGGGCGACTTAAGGACTCAATCTGGGGTAGATGACGAAGATATTTACTCTCATCAGGTGTTACGGCCTTCCAGTTGGAGGATCTTCGAGGAAGAAAAGCAAATTGCTAACACAAGCAGCAGGAGAAGCGACACTTGCTCACAAACCTCCTGTGTGACAAATCCTACTCTAACTGACAGTATAGATCAGAGTGGCAAGTCAGCAGCCAATGCAGATTTTGTGTCATTTTCTCCATGGGATTTGGGATTGAACCTTCTGTGA 4299 0.4252 METSRACSPELMKTSRDEGKRSLIMYKKEEEEEKDEDDDDKGKIESELGYRVEHGRKSRVISDAYSQRVPKPGSLSAPPSCQVDGCHADLSNARAYHRRHKVCEHHAKAPKVLFSGHEQRFCQQCSRFHELSEFDNSQRSCRRRLAWDLQKRLARARERLSSDYLGKAAPGSQLVAPLTPTLPPTQSHGPSGSGSIRPGFMAGTALMGHILKPDVAFKCPRCHSTNTEFCYFINCDPSQPRHLCKTCRRYWTRGGTLRNVPAGGGCRRNQRSKGSSSKSPPVSSDRQTGSATSTTSASSNSASASDIVGQAYYGSSNQMGGVGDLSSMFDHTKIPVSILNLAADLAINQLLQILLSGDDHSLNIRRIMICTRNDDERRQVFEKLMKDIDNMPCFNEIFHEVLWVDESLCQSQVNVKAHAQKQINLQLRQLSGISQSNHQSMIRKKYLVLGFDGYDEKTVDMGKLNLAGGDEAIMVLITTESRKQEEKDKGTIAMDLAISTNDHLLPCRVFCQTVGNELVFSSSALQEIAVRIVQECGGHLLAIVLVAKSLESVKDVKLWELALNKLSFLNPPYDMNMFQGVSRVMVTTFINFIWNDMNQILKLCLTSCLFIPHIKTGKLSNELMHHWISWQLTDDGEGLHNLTELVERSVLIQDQSNDKYVRLPEDIHAILHSLNTLTPLFMKKPGLGLTEPPKDEEWHSVVHLELANNKLSELPLSPSSPELRVLMLQGNVDLTRIPNTFFVKMPLLTILDLSYTSVRELPDSLFELEQLREMYLKVCESYMKLSPKIGKLKKLEKLDLEGTQIIHLPEEIQELTNLQSLFLCFYEYRGKKGKQYTCSKIIPSQVISKLKGLKHLSIDVNPDDERWYENVQDILPEILGLEYLLTLSLYIPHLEILKFIPNRIAQVDFKLIVGRHMQRIISSTPSTAEAKFKQSGCSLKFVNGDHVPKEIKRLARHSKALFLERHKTIKNLSEFQMMNLEQLRVCILAECREMQTVVDGRQLIWGNEIFSHLLYLYISHMKSLRSIWEGPMPPRCFFGMLKSLVLQNCPELTTVFTMDFLGNLSLLKELMVKDCPKVTTLISDMVKDCPKVTTLISDGSFKHKGEVFLPKLRKIMLLHLPELITISNGCYIGPRLNNMAIYDCPKLQSLSRSELSSQTLKIIKGEIKWWDQLQWSKEEWGISQRPSKFDRVFSSIDNQVDIMTQIWNDDDDIDDAADITPLQTIFELPKQSADNISRVTFSVPIETAELGDFVLDDGYRWRKYGQKTMVGSKNPRSYYKCTHVGCPVRKYSQQSEKDPRKIEVCYNGIHTHTIPQPRRSLHELQSTGIEGAPLQSSSVTNASMNNQGDLRTQSGVDDEDIYSHQVLRPSSWRIFEEEKQIANTSSRRSDTCSQTSCVTNPTLTDSIDQSGKSAANADFVSFSPWDLGLNLL 1432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1397 1432 MobiDBLite consensus disorder prediction 1331 1352 - -
Lele33g1397 1432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 608 IPR027417 -
Lele33g1397 1432 Pfam WRKY DNA -binding domain 1256 1312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele33g1397 1432 MobiDBLite consensus disorder prediction 175 198 - -
Lele33g1397 1432 MobiDBLite consensus disorder prediction 269 301 - -
Lele33g1397 1432 FunFam Squamosa promoter-binding-like protein 14 73 142 - -
Lele33g1397 1432 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 18 307 IPR044817 GO:0003677
Lele33g1397 1432 SUPERFAMILY SBT domain 79 152 IPR036893 GO:0003677|GO:0005634
Lele33g1397 1432 Gene3D - 507 577 IPR042197 -
Lele33g1397 1432 ProSiteProfiles Zinc finger Dof-type profile. 217 271 IPR003851 GO:0003677|GO:0006355
Lele33g1397 1432 MobiDBLite consensus disorder prediction 1 49 - -
Lele33g1397 1432 MobiDBLite consensus disorder prediction 261 301 - -
Lele33g1397 1432 Pfam Leucine rich repeat 721 777 IPR001611 GO:0005515
Lele33g1397 1432 SUPERFAMILY L domain-like 654 1139 - -
Lele33g1397 1432 Gene3D Ribonuclease Inhibitor 937 1178 IPR032675 -
Lele33g1397 1432 Pfam NB-ARC domain 396 567 IPR002182 GO:0043531
Lele33g1397 1432 ProSitePatterns Zinc finger Dof-type signature. 219 255 IPR003851 GO:0003677|GO:0006355
Lele33g1397 1432 ProSiteProfiles Zinc finger SBP-type profile. 78 155 IPR004333 GO:0003677
Lele33g1397 1432 Gene3D Ribonuclease Inhibitor 671 918 IPR032675 -
Lele33g1397 1432 Gene3D WRKY domain 1243 1316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele33g1397 1432 SUPERFAMILY WRKY DNA-binding domain 1254 1315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele33g1397 1432 MobiDBLite consensus disorder prediction 11 30 - -
Lele33g1397 1432 Gene3D - 73 142 IPR036893 GO:0003677|GO:0005634
Lele33g1397 1432 ProSiteProfiles WRKY domain profile. 1254 1315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele33g1397 1432 SMART LRR_typ_2 792 815 IPR003591 -
Lele33g1397 1432 SMART LRR_typ_2 745 768 IPR003591 -
Lele33g1397 1432 Pfam Dof domain, zinc finger 216 271 IPR003851 GO:0003677|GO:0006355
Lele33g1397 1432 Pfam SBP domain 81 152 IPR004333 GO:0003677
Lele33g1397 1432 MobiDBLite consensus disorder prediction 178 193 - -
Lele33g1397 1432 Coils Coil 27 47 - -
Lele33g1397 1432 MobiDBLite consensus disorder prediction 1331 1356 - -
Lele33g1397 1432 SMART WRKY_cls 1255 1314 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1397 Lele-ChrLele33 24527419 24533921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1397 196 348 C2C2-Dof Transcription Factor Family AT2G37590 43.137 1.27e-31 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele33g1397 NB-ARC 2.6e-06 CL0023