Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1388 ATGGAAACAAGCAGAGCCTGCTCCCCTGAACTTATAAAAACAATCAGAGAGGAGGGAAAGAGGAGCTTGATAATGTACAAGAAAGAGGAAGAGGAGGAGAAAGACGAAGACGACGACGATGAAGGAAAGATAGAGAGTGAATTTGTCTATGGAGTAGAACATGGCAGAAAGAGCTGGGTTATATCTGATGCATACAGCAAGAGAGTCCCCAAACCAGGAAGCTTGGCAGCGCCACCGAGTTGTCATGGCGATGGTTGCCACGCTGATCTGAGCAACGCCAAAGGGTATCACCGGCTGCACAAGGTCTGTGAGCACCACGCTAAAGCACCGAAAGTACTCATTTCAGGGTGTGAGCGACGATTTTGCCAGCAATGTAGCAGGTTTCATGGGCTTTCGGAGTTTGACAACTCAAAACGAAGTTGTAGAAGGCGTTTGGCAGCGCATTGTGAGAGACGAAGACTTCCTGGACTTCGTATTGAGATACCGCGTACGGTTTCATCTGCTTATGGAAAAGCAGCCCCAGGTTCTCAGCTTGTTGCTCCTCTGACTCCAACACTGCCACCTACTCAGTCTCATGGACCTAGTGGCTCCGGCTCCATTAGGCCCGGTTTCATGGGTGGCACGGCTCTGATGGGCCACATACTCAAGCCGGAGGTGGCGTTCAAATGCCCTCGCTGCCATTCCACCAACTTCATCAACTGCGACCCCTCTCAGCCTCGCCATTTATGCAAAACCTGTAGAAGGTACTGGACCCGAGGGGGGACCCTGCGAAATGTCCCAGCCGGCGGAGTTGGTGACTTAAGTTCCATGTTCGATCATACTAAGATACCAGTTTCGATTCTCAATTTAGCTGCTGATCTTGCTATAAATCAACTGCTTCAAATCTTACTCTCTGGGGATGATCATGCACTTAACATTCGTCGTATCATGATTTGCACCAGAAATGATGATGAACGACTACAAGTTTTTGAAAAACTGATGAAGGATATCGACAATATGCCTTGTTTTAATGAAATCTTTCATGAAGTCTTGTGGGTTGATGAGTCATTGTGTCAAAGCCAAGTAAACGTAAAGGCTCATGCTCAAAAACAAATCAATCTGCAGCTTCGCCAGCTTTCAGGGATCAGTCAGAGCAATCACCAAAGCATGATCAGAAAGAAATATTTAGTGCTTGGTTTTGATGGATATGATGAGAAAACTATAGATATGGGGAAATTGAATTTGGCTGGAGGTGATGAGGCTATTATGGTGTTGATTACCACTGAATCTCGAAAGCAAGAAGCAAATGATAAAGGAACAATAGCGATGGATCTGGCAATCAGTACAAATGATCATTTGTTGCCATGCAGAGTCTTTTGTCAAACTGTAGGCAATGAGCTTGTCTTTTCATCTAGTGCCCTCCAGGAAATTGCAGTACGCATAGTCCAAGAATGTGGTGGCCATCTTTTAGCCATTGTCCTTGTGGCAAAGTCATTGGAGAATGTGAAGGATGTCAAACTCTGGGAACTTGCACTAAACAAATTGAGCTTCCTTAATCCTCCTTATGACATGAACATGTTTCAGGGCATAAGCAGAGTTATGGTGACTACATTCATAAACTTCATCTGGAATGATATGAATCAAATACTGAAGCAATGCCTAATAAGTTGCTTATTCGTTCCTCATATCAAAACTGGTAAGTTGTCAAATGAATTGATGCATCATTGGATTTCTTGGCAGTTAACGGATGATGGAGAAGGTCTGCATAACTTGACAGAGCTTGTAGAACGCTCTGTCTTAATCCAAGATCAATCAAATGATAAGTATGTCCGATTGCCGGAGGACATACATGCTATTTTGCATTCATTGAACACCCTAACCCCTTTGTTCATGAAGAAACCTGGACTAGGGTTGACGGAACCACCAAAGGATGAGGAATGGCATAGTGTTGTACATATGGAACTTGCAAACAATAAATTATCTGAACTGCCTTTGTCTCCAAGCAGCCCTGAACTCAGAGTGTTAATGTTGCACGGAAATGTTGATATAACAAGAATCCCAAATACGTTTTTTGTTAAAATGCCCTTGCTTACAATCCTGGACTTATCTTACACTAGTGTACGAGAACTACCAGACTCTCTTTTTGAGTTGGAGCAGCTCAGAGAAATGTATTTGAAAGTCTGTGAATGTTTCATGAAATTATCACCAAAAATTGGGAAATTGAAGAAACTCGAGAAGCTTGATCTTGAAGGAACTCAGATCATATATCTGCCAGAAGAGATTCAAGAGTTAACCAATCTCCAAAGCTTGTTCCTTTGCTTCTATGAATATCGGGGCAAAAAAGGTAAGCAATACACGTGCTCAAAAATTATTCCATCTCAGGTAATCTCAAAACTCAAGGGGCTAAAACATTTAAGTATTGATGTGAACCCTGATGATGAGCGGTGGTATGAAAATGTACAAGACATTCTTCCAGAAATATTGGGATTAGAGTATTTGCTGACTCTTAGCTTATACATCCCACATCTGGAACTTTTAAAGTTCATACCAGACCGTATATTTCAGGTTGATTTTAAACTTATTGTTGGTAGGCATATGCAAAGGATCATATCAAGTACACCATCCACAGCTGAGGCAAAATTTAAACAAAGTGGTTGTAGCTTGAAGTTTGTAAATGGTGATCATGTCCCTAAAGAAATTAAAAGGCTTGCTAGCCACAGTAAGGCTTTATTTCTGGAGCGACACAAGACAATCAAGAATCTATCAGAATTTCAGATGATGAATCTAGAACAGCTGCGCGTATGTATTTTGGCTGAATGCAGAGAAATGCAAACCGTTGTGGATGGAAGGAAATCAATTAGGGGTAATGATGTTTTCTCACATTTGCTATACTTGTATATATCACACATGAAAAGTTTAAGACGCGTATGGGAAGGGCCAATGCCACCTCCCTGCTTTTTTGGTATGCTGAAGTCTTTAGTATTGCAAAATTGCCCCGAGTTAACAACTGTCTTTACCATGGATTTTTTGGGCAATCTTTCACTATTAAAGGAGCTTATGGTTAAGGATTGTCCCAAAGTAACCACCTTGATAAGTGATGGATCATTCAAACATAAAGGAAAGATTTTCCTGCCTAAATTGAGAAAGATAATGCTTCTCCATCTTCCTGAGTTGATCACCATTTCCAATGGATGTTACATAGCTCCAAGCTTGAATAGTATGGCAATTTATGGTTGCCCAAAGCTCCAGTGCCTTTCTAGGTCAGAACTATCAAGCCAAACTCTGAAGGTCATTAAGGGAGAAATCAATTGGTGGGACCAAGTACAATGGAGCACAGAAGAATGGGGAATATCACGACGACCGTCAAAGTTTGATTGCATCTTTTCCCCAATAGATAATCAGGTTGACATAATGACTCAATTTGGGAATGACGGTGATGACATTGACGATGATGCAGATATGACGTGGCTACAGACTTTATCTGAACTTAGAGGTTCTAAATTAGATGATGGGTACAAGTGGAGGAAATATGGCCAGAAAACGGTGGATGGATCCAAAATTCTAAGCAATGCCTCCTCAGGAGGGACAATGAGTGTGATCACTGATCATGGCTCTGATGCTGACTTCGCTTCCACTCCATTTTGTGAAGATCCCGTCATGAGAGAACCATATGACTCCAATCCTGACTCAGTTTCTTATGTTCACAGTTACGAATCTGCCCTCGACTCTCTTTCTGATGACAGCGACGTTGAACAGATCATTCCCACATCCTCCAAAGTATTTGTTTGA 3768 0.4196 METSRACSPELIKTIREEGKRSLIMYKKEEEEEKDEDDDDEGKIESEFVYGVEHGRKSWVISDAYSKRVPKPGSLAAPPSCHGDGCHADLSNAKGYHRLHKVCEHHAKAPKVLISGCERRFCQQCSRFHGLSEFDNSKRSCRRRLAAHCERRRLPGLRIEIPRTVSSAYGKAAPGSQLVAPLTPTLPPTQSHGPSGSGSIRPGFMGGTALMGHILKPEVAFKCPRCHSTNFINCDPSQPRHLCKTCRRYWTRGGTLRNVPAGGVGDLSSMFDHTKIPVSILNLAADLAINQLLQILLSGDDHALNIRRIMICTRNDDERLQVFEKLMKDIDNMPCFNEIFHEVLWVDESLCQSQVNVKAHAQKQINLQLRQLSGISQSNHQSMIRKKYLVLGFDGYDEKTIDMGKLNLAGGDEAIMVLITTESRKQEANDKGTIAMDLAISTNDHLLPCRVFCQTVGNELVFSSSALQEIAVRIVQECGGHLLAIVLVAKSLENVKDVKLWELALNKLSFLNPPYDMNMFQGISRVMVTTFINFIWNDMNQILKQCLISCLFVPHIKTGKLSNELMHHWISWQLTDDGEGLHNLTELVERSVLIQDQSNDKYVRLPEDIHAILHSLNTLTPLFMKKPGLGLTEPPKDEEWHSVVHMELANNKLSELPLSPSSPELRVLMLHGNVDITRIPNTFFVKMPLLTILDLSYTSVRELPDSLFELEQLREMYLKVCECFMKLSPKIGKLKKLEKLDLEGTQIIYLPEEIQELTNLQSLFLCFYEYRGKKGKQYTCSKIIPSQVISKLKGLKHLSIDVNPDDERWYENVQDILPEILGLEYLLTLSLYIPHLELLKFIPDRIFQVDFKLIVGRHMQRIISSTPSTAEAKFKQSGCSLKFVNGDHVPKEIKRLASHSKALFLERHKTIKNLSEFQMMNLEQLRVCILAECREMQTVVDGRKSIRGNDVFSHLLYLYISHMKSLRRVWEGPMPPPCFFGMLKSLVLQNCPELTTVFTMDFLGNLSLLKELMVKDCPKVTTLISDGSFKHKGKIFLPKLRKIMLLHLPELITISNGCYIAPSLNSMAIYGCPKLQCLSRSELSSQTLKVIKGEINWWDQVQWSTEEWGISRRPSKFDCIFSPIDNQVDIMTQFGNDGDDIDDDADMTWLQTLSELRGSKLDDGYKWRKYGQKTVDGSKILSNASSGGTMSVITDHGSDADFASTPFCEDPVMREPYDSNPDSVSYVHSYESALDSLSDDSDVEQIIPTSSKVFV 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1388 1255 Pfam SBP domain 81 153 IPR004333 GO:0003677
Lele33g1388 1255 SUPERFAMILY SBT domain 79 157 IPR036893 GO:0003677|GO:0005634
Lele33g1388 1255 SUPERFAMILY WRKY DNA-binding domain 1160 1180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele33g1388 1255 Pfam NB-ARC domain 338 509 IPR002182 GO:0043531
Lele33g1388 1255 Gene3D Ribonuclease Inhibitor 877 1102 IPR032675 -
Lele33g1388 1255 ProSiteProfiles WRKY domain profile. 1161 1178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele33g1388 1255 Pfam Leucine rich repeat 663 719 IPR001611 GO:0005515
Lele33g1388 1255 Pfam Dof domain, zinc finger 221 264 IPR003851 GO:0003677|GO:0006355
Lele33g1388 1255 MobiDBLite consensus disorder prediction 24 44 - -
Lele33g1388 1255 Gene3D Ribonuclease Inhibitor 594 844 IPR032675 -
Lele33g1388 1255 Gene3D - 73 142 IPR036893 GO:0003677|GO:0005634
Lele33g1388 1255 Gene3D WRKY domain 1149 1186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele33g1388 1255 SUPERFAMILY L domain-like 596 1083 - -
Lele33g1388 1255 SMART LRR_typ_2 687 710 IPR003591 -
Lele33g1388 1255 SMART LRR_typ_2 734 757 IPR003591 -
Lele33g1388 1255 Pfam WRKY DNA -binding domain 1162 1179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele33g1388 1255 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 66 198 IPR044817 GO:0003677
Lele33g1388 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 550 IPR027417 -
Lele33g1388 1255 ProSiteProfiles Zinc finger SBP-type profile. 78 155 IPR004333 GO:0003677
Lele33g1388 1255 Gene3D - 449 521 IPR042197 -
Lele33g1388 1255 ProSiteProfiles Zinc finger Dof-type profile. 221 270 IPR003851 GO:0003677|GO:0006355
Lele33g1388 1255 SMART WRKY_cls 1161 1198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1388 Lele-ChrLele33 24474494 24481542 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1388 81 153 SBP-box Gene Family AT2G33810 69.863 1.11e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele33g1388 NB-ARC 2e-06 CL0023