Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1372 ATGGGGAAAAAATTAAAGCGCTCGTACCCTGAGAAATCGGACGACTCGACAGGAAGAAGAAGAAAGACAGAAAGAGCTTGCCGTTATATACTTGCGTTGTCTTGCTATTTCGCCTTCACGCAGTCACAGCACTTTGCTTCAGGAGAACGTTCCCATTATCTTCAATTAGAGCAGCGGTACGTTTTCCGTGAAGCCATGGCCCTGATCCTATACCCTGGGAGAAACACAAGCAAGAATGGCTATAAGGCACTCATTGCAGCAGAATATGTAGGCGTGCAAATTAAAGTGGCCGAAGATTTTGAGATGGGCGTCTCTAATAAAACACCTGAATTTCTTAAGATGAATCCTATTGGCAAGGTTCCTGTTTTGGAAACACCAGATGGTCCAGTATTTGAGAGCAATGCGATTGCACGTTATGTTGCTCGCTTGAAGTCTGATAGTCCATTATATGGAAGCTCTCCAATTGATTATGGCCACATTGAACAATGGATCGATTTTTCTTCATTGGAGATTGATGCTAATCTTCGCACTTGGTTCATACCAAGAATGGGACATGCTCAATACATTGCCCCGGTTGAAGAGTCTGCAATTTCTGCATTGAAGAGAGCATTGGGTGCTTTGAACACTTACCTTGCCTCTACTACTTTCTTGGTTGGGCATTCTGTGACTCTGGCTGACATCATCATGACATGCAATTTGTATTTTGGTTTCACTTGTGTCATGACTAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACTTTGGTCAACCAGCCAAAATTCCAAAAAATTATAGGTGAGGTCAAGCAGACTGGAGCTGTTCCTCCTATTCAGTCTGCGAAGAAGCCTTCCCAGCCCAAAGAATCGTCTAAACCCAAAAAGGATGAACCAAAGAAAGAGACTAAGAAAGAGGCCCCAAAAGCAGAAAAACCTGCAGAAGAAGCTGAAGAGGAGACACCAAAGCCCAAGCCCAAGAATCCCCTTGACCTTCTTCCTCCAAGTAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAACACCAAAACCAACTTCCGTGAGGTTGCAATCAAAGGATTTTGGGACATGTATGATCCTGAGGGATACTCTCTTTGGTTTTGTGATTACAAGTACAACGAAGAGAATACCGTTTCCTTTGTGACGATGAACAAGGTCGGAGGATTCCTTCAGAGGATGGATCTGGCTCGCAAGTATGCATTCGGGAAGATGCTCGTGATCGGTTCTGAACCACCATTCAAGGTGAAGGGATTATGGCTATTCCGTGGGCAAGAAATCCCTCAGTTTGTGATTGATGAGTGCTATGACATGGAGCTCTACGAATGGACTAAGGTTGACATCTCAGATGAAGCTCAAAAGGAGCGTGTCAATCAGATGATTGAAGATTATGAGCCTTTTGAGGGACAGCCTCTTCTGGATGCCAAATGCTTCAAGTGA 1467 0.4404 MGKKLKRSYPEKSDDSTGRRRKTERACRYILALSCYFAFTQSQHFASGERSHYLQLEQRYVFREAMALILYPGRNTSKNGYKALIAAEYVGVQIKVAEDFEMGVSNKTPEFLKMNPIGKVPVLETPDGPVFESNAIARYVARLKSDSPLYGSSPIDYGHIEQWIDFSSLEIDANLRTWFIPRMGHAQYIAPVEESAISALKRALGALNTYLASTTFLVGHSVTLADIIMTCNLYFGFTCVMTKSFTSEFPHVERYFWTLVNQPKFQKIIGEVKQTGAVPPIQSAKKPSQPKESSKPKKDEPKKETKKEAPKAEKPAEEAEEETPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNEENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDEAQKERVNQMIEDYEPFEGQPLLDAKCFK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1372 488 CDD GST_N_EF1Bgamma 70 143 - -
Lele33g1372 488 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 328 488 IPR001662 GO:0003746|GO:0006414
Lele33g1372 488 MobiDBLite consensus disorder prediction 279 335 - -
Lele33g1372 488 FunFam Elongation factor 1-gamma 1 328 488 - -
Lele33g1372 488 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 67 148 IPR004045 -
Lele33g1372 488 SFLD Main (cytGST) 77 256 - -
Lele33g1372 488 MobiDBLite consensus disorder prediction 1 20 - -
Lele33g1372 488 Gene3D - 146 278 - -
Lele33g1372 488 Coils Coil 302 322 - -
Lele33g1372 488 Pfam Elongation factor 1 gamma, conserved domain 327 435 IPR001662 GO:0003746|GO:0006414
Lele33g1372 488 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 66 488 IPR044628 GO:0004364
Lele33g1372 488 SMART EF1G_2 327 435 IPR001662 GO:0003746|GO:0006414
Lele33g1372 488 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 328 488 IPR036433 GO:0003746|GO:0006414
Lele33g1372 488 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 153 281 IPR010987 -
Lele33g1372 488 Gene3D Glutaredoxin 65 140 - -
Lele33g1372 488 FunFam Elongation factor 1 gamma 146 282 - -
Lele33g1372 488 CDD GST_C_EF1Bgamma_like 156 273 - -
Lele33g1372 488 Pfam Glutathione S-transferase, C-terminal domain 188 263 IPR004046 -
Lele33g1372 488 SUPERFAMILY eEF1-gamma domain 328 488 IPR036433 GO:0003746|GO:0006414
Lele33g1372 488 MobiDBLite consensus disorder prediction 290 328 - -
Lele33g1372 488 SUPERFAMILY Thioredoxin-like 65 151 IPR036249 -
Lele33g1372 488 Pfam Glutathione S-transferase, N-terminal domain 66 142 IPR004045 -
Lele33g1372 488 SFLD Glutathione Transferase (cytosolic) 77 256 IPR040079 -
Lele33g1372 488 SUPERFAMILY GST C-terminal domain-like 139 275 IPR036282 -
Lele33g1372 488 FunFam Elongation factor 1B gamma 65 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1372 Lele-ChrLele33 24317822 24323014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1372 66 488 Eukaryotic Initiation Factors Gene Family AT1G57720 73.522 0.0 624