Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele33g1350 | ATGGATCTTCTTCTGGGTCTTCTTTTTCTTGCATTGGTCTCTCTCTTCACCAGCCATTGCTCAGAAGCTATTGCTACTTCGGTCCCTAGCGACGCATTGTCGCTTCTCAGCTTCAAGGACTCTGTCTGTAAGGAATCTTCTGACCTTCTCTCCGGATGGAGTAAGGAGTCTTCTGAAAGTTACTGTCAATGGCACGGCGTCACCTGCGAGAATAGGCTCTCTGGCAGAGTTATTGCTTTGAACTTGACCGGACTTCGCGGCGGCGAGCTCACTCCTTCCATTGGAGATTTGTCTGAGCTTCGGGGTTTGTCCCTTCCTCATAATATGTTCTCCGGTGAGATCCCGGAGACTCTGGGAAAGCTTCGTCTTCTGGAGGTTCTTGAGCTTCAAGGAAACAATTTTTCCGGGAGGATCCCCTACCAGATTAGCTATCTTCCATCTCTTCGCATTCTTAAACTCTCTAATAATGCTTTCTCCGGTTCTGTACCCGGTAAATTGATTGGCTCTGGAAACGTTAGCTTCATTGACTTGTCGAATAATCAGCTTTCTGGTCCAATTGTAGATAGTTTCAACACAATCTTTGAATTTTTGAATCATTTGAAGCTGTCCCACAACTTCCTAACAGGTGAAATCCCCTCCGAAATTGGGAAATTCAGAAATTTGACGACGCTTTTACTCGATGGGAATATCTTAGAAGGCGCTATCCCTTCTGAGATTGGGTATATGACAGAACTCAGACTTCTAGATGTCTCTAGAAATAGTCTCACCGGAAGGATTCCAAAAGAGATAGCCAACTGCCGGAAACTGTCGGTGCTTGTGTTGACTGATTTATCCGATGATAATGCTTCCTCTGATGAGAGCTTGGTGAATAGCTTCAGAGGAGAATTCAATGCTTTTGTTGGACATATTCCTCCGCAGGTGTTGTTGCTTCCAAGTTTAGAGATTTTGTGGGCACCAAGAGCGAATCTTGGCGGACGGTTGCCTAGGGGCTGGACAGATTCTTGCTCGCTGAGAGTACTCAACTTGGCAGAGAATTATATTATCGGGGGCATACCAGAAACCTTGGGGATGTGCAGAAATTTAACTTTCCTTGACTTGAGCTCTAACAATTTAGCGGGCTATCTTCCTTCAAAGCAGCTTCAAGTTCCATGTATGGTGTACTTCAATGTCAGCCGGAACAATCTATCTGGCACACTTCCAGGATTTGGAAAGGAAAGCTGTGATTTAAGCAGAATTCTAGGTTATGCGCATGTTGATATTCTAGTTTGGGAATCTCTAATGGATGCTCTCACTGAATCGGGTTCAGAAGATGCTGTTGTCATTGACCATGATTTCAGTTGGAATAGCTTTACGGGATCTTTACCTTTATTCTCACTAGGTGATACTGCAAACAGTAAGATTTCCTACACGCTATCACTAAATAATAACAAGTTCAGTGGAACTCTACCATATCATCTGGTTTCGAACTGTAATGATCTCAAGATGTTAAGGGTTAACTTGAGTGTGAATCAACTCTCAGGTGGGAATTCACAAAAATTGCTTCTTGACTGTTTGAAGTTGACAGAGTTTGAGGTTGCGTACAACCAGATTGGGGGTTCAATTGATCCACATATTGGCGACTATACAATGCTCCTGCGCCTTGATCTGAGGGGGAACAAACTTACAGGATTTCTGCCTGATCAATTGGGAAACCTGAAAGGCATGAAATGGGTGCTTTTAGGAGGGAACAATTTAACTGGACAAATCCCTTCTCAACTTGGTCAATTGGCTTCCCTTGTTGTTTTGGATCTATCTCACAATGCTCTTACTGGCACAATTCCTGCAAGTTTGACAAATGCCACAACTCTTGAAACTCTGTTGCTAGATCACAACAAGCTCGATGGGGAAATACCTTCATCTTTTTCCACTCTTTCCAGTCTTGTTGGTTTTGATGTTTCTTTCAACAACCTTAAAGGTCATATTCCCCATCTTCATCACCCAAGTGTTTGTGACTCCTACAAGGGGAATGTACACCTGCATTCATGCCCCGATCCGTATTCTACCTCACCTGCTTATCTCCCAGTCCCTCTTGAAGTCCCACATTGGCATAGACGAAAAAAATTGAAGACAATAATAATAGCTGTGGTCTCTTCAGTCTCTGTGGTTCTCTGTGTACTAGGAATAGTTTTGGTGATCACTTTTGGAAGGAACAAGTTTGGTCGGCGCAGCAGCCTTCGAAGCAGACTACTAGTTACCTTCCAAGATGTTCCAATTGAACTCAGTTATGATAATGTTGTCACAGCCACAGGAAATTTCAGCCTCCAAAATCTAATTGGAACCGGTGGGTTTGGGTCTACTTACAAGGCTGAACTATCCCCTGGTTTCCTTGTTGCCATAAAGAGGTTGTCTATAGGTAAATTCCAAGGCATTCAACAGTTCGAGACGGAGATAAGAACCTTGGGGAGAATCCGGCACAAAAACCTTGTCACTCTCATTGGCTACTATGTGGGAGATGCCGAAATGTTCTTGATATACAACTACCTTTCAGGTGGGAACCTTGAAACCTTCATACATAACAATTCAGACAAAAATATGTTGTGGCCAATTATCTACAAGATAGCAATAGACATAGCAGAGGCCATAGCTTACCTTCATTACTCCTGTGTTCCTCGCATAGTTCATCGTGACATCAAGCCCAGCAACATCTTACTTGATGAGGATTACAATGCCTACCTTTCAGATTTTGGATTGGCTAGACTCATGGAGGTATCTGAGACCCACGCCACAACTGATGTGGCAGGCACCTTTGGGTACGTTGCACCTGAATATGCCACCACTTGCAGGGTTTCTGACAAAGCAGATGTTTATAGCTTTGGTGTCGTGTTACTAGAATTAATGTCTGGAAGGAAGTCACTTGACCCATCTTTTTCTGAATATGGAAATGGGTTCAATATTGTCCCGTGGGCTAAGTTGCTAATGACTGAAGGTCGTTCTTCTGAACTGTTTTCACCTGCTCTGTGGGAAGCAGGACCTGAGGAGAAACTGTTGGGGCTTTTAAAAGTAGCACTAATCTGCACAGTGGAGACTCTTTCTGTTCGGCCATCGATGAAACAGGTTTTTGAGAAATTGAAACAACTTAAAAGTTAA | 3126 | 0.4344 | MDLLLGLLFLALVSLFTSHCSEAIATSVPSDALSLLSFKDSVCKESSDLLSGWSKESSESYCQWHGVTCENRLSGRVIALNLTGLRGGELTPSIGDLSELRGLSLPHNMFSGEIPETLGKLRLLEVLELQGNNFSGRIPYQISYLPSLRILKLSNNAFSGSVPGKLIGSGNVSFIDLSNNQLSGPIVDSFNTIFEFLNHLKLSHNFLTGEIPSEIGKFRNLTTLLLDGNILEGAIPSEIGYMTELRLLDVSRNSLTGRIPKEIANCRKLSVLVLTDLSDDNASSDESLVNSFRGEFNAFVGHIPPQVLLLPSLEILWAPRANLGGRLPRGWTDSCSLRVLNLAENYIIGGIPETLGMCRNLTFLDLSSNNLAGYLPSKQLQVPCMVYFNVSRNNLSGTLPGFGKESCDLSRILGYAHVDILVWESLMDALTESGSEDAVVIDHDFSWNSFTGSLPLFSLGDTANSKISYTLSLNNNKFSGTLPYHLVSNCNDLKMLRVNLSVNQLSGGNSQKLLLDCLKLTEFEVAYNQIGGSIDPHIGDYTMLLRLDLRGNKLTGFLPDQLGNLKGMKWVLLGGNNLTGQIPSQLGQLASLVVLDLSHNALTGTIPASLTNATTLETLLLDHNKLDGEIPSSFSTLSSLVGFDVSFNNLKGHIPHLHHPSVCDSYKGNVHLHSCPDPYSTSPAYLPVPLEVPHWHRRKKLKTIIIAVVSSVSVVLCVLGIVLVITFGRNKFGRRSSLRSRLLVTFQDVPIELSYDNVVTATGNFSLQNLIGTGGFGSTYKAELSPGFLVAIKRLSIGKFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGDAEMFLIYNYLSGGNLETFIHNNSDKNMLWPIIYKIAIDIAEAIAYLHYSCVPRIVHRDIKPSNILLDEDYNAYLSDFGLARLMEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVPWAKLLMTEGRSSELFSPALWEAGPEEKLLGLLKVALICTVETLSVRPSMKQVFEKLKQLKS | 1041 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele33g1350 | 1041 | SUPERFAMILY | Protein kinase-like (PK-like) | 740 | 1036 | IPR011009 | - | |
| Lele33g1350 | 1041 | Gene3D | Ribonuclease Inhibitor | 440 | 674 | IPR032675 | - | |
| Lele33g1350 | 1041 | Gene3D | Ribonuclease Inhibitor | 290 | 419 | IPR032675 | - | |
| Lele33g1350 | 1041 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 296 | 1038 | - | - | |
| Lele33g1350 | 1041 | PRINTS | Leucine-rich repeat signature | 589 | 602 | - | - | |
| Lele33g1350 | 1041 | PRINTS | Leucine-rich repeat signature | 361 | 374 | - | - | |
| Lele33g1350 | 1041 | Gene3D | Ribonuclease Inhibitor | 192 | 289 | IPR032675 | - | |
| Lele33g1350 | 1041 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 192 | 279 | - | - | |
| Lele33g1350 | 1041 | Coils | Coil | 1029 | 1041 | - | - | |
| Lele33g1350 | 1041 | Gene3D | Ribonuclease Inhibitor | 30 | 191 | IPR032675 | - | |
| Lele33g1350 | 1041 | Pfam | Leucine rich repeat N-terminal domain | 29 | 69 | IPR013210 | - | |
| Lele33g1350 | 1041 | Pfam | Leucine rich repeat | 569 | 626 | IPR001611 | GO:0005515 | |
| Lele33g1350 | 1041 | Pfam | Protein kinase domain | 767 | 966 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele33g1350 | 1041 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 729 | 840 | - | - | |
| Lele33g1350 | 1041 | SMART | serkin_6 | 765 | 1040 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele33g1350 | 1041 | Gene3D | Transferase(Phosphotransferase) domain 1 | 841 | 1040 | - | - | |
| Lele33g1350 | 1041 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 885 | 897 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele33g1350 | 1041 | CDD | STKc_IRAK | 771 | 1039 | - | - | |
| Lele33g1350 | 1041 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 841 | 1041 | - | - | |
| Lele33g1350 | 1041 | ProSitePatterns | Protein kinases ATP-binding region signature. | 771 | 799 | IPR017441 | GO:0005524 | |
| Lele33g1350 | 1041 | Gene3D | Phosphorylase Kinase; domain 1 | 729 | 840 | - | - | |
| Lele33g1350 | 1041 | SUPERFAMILY | RNI-like | 81 | 399 | - | - | |
| Lele33g1350 | 1041 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 424 | 683 | - | - | |
| Lele33g1350 | 1041 | FunFam | Leucine-rich repeat receptor-like protein kinase | 28 | 188 | - | - | |
| Lele33g1350 | 1041 | SUPERFAMILY | L domain-like | 297 | 662 | - | - | |
| Lele33g1350 | 1041 | SMART | LRR_typ_2 | 589 | 613 | IPR003591 | - | |
| Lele33g1350 | 1041 | SMART | LRR_typ_2 | 145 | 169 | IPR003591 | - | |
| Lele33g1350 | 1041 | SMART | LRR_typ_2 | 242 | 266 | IPR003591 | - | |
| Lele33g1350 | 1041 | ProSiteProfiles | Protein kinase domain profile. | 765 | 1039 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele33g1350 | Lele-ChrLele33 | 24146099 | 24149224 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele33g1350 | 16 | 1040 | Receptor kinase-like Gene Family | AT3G02130 | 43.348 | 0.0 | 793 |
Transcription factors information