Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1345 ATGAACCATATGATGTTTGGAATTAACATGAATTCCTTGGCGGATTTTAAACGACATGTCGTCTACAGGGAGTGTGAGCATAGCCATGCAGCCTCACTTGGTGGAGTAGCCAGAGATGGCTGCTATGAGTTTCTGCAACCTCTTGTTCTCAACGGTGGCTCACCGGAGGATGCGGTACGTTGTGCAGTCTGCGGATGCCACCGCAACTATCACCGGAGACAAGTTGTCTTTACTCGGCCTATGCCAACTGCAGTGGCTCGAGCAAATGCAGCGGAGGGGCCGGCAGTGGCAGTGGGGCCGCGGCCGCCTAGGAGGCCAAGGAGGAAGAGGAGGGAAAATTTCAGGGAGGAGCAAAAGAGCCAAATGGCGAGTTTTGCAGGGAGGCTGGGTTGGAGGGTTAAGAGATCTTCCAAGGAAGAGATTCTGAGGTTTTGCATGGAAATAGGAATCACTCGTAAGATGTTTGTTGTTTGGCTAAACAACAACAGACCGAGAGAATCCAAATGA 507 0.5128 MNHMMFGINMNSLADFKRHVVYRECEHSHAASLGGVARDGCYEFLQPLVLNGGSPEDAVRCAVCGCHRNYHRRQVVFTRPMPTAVARANAAEGPAVAVGPRPPRRPRRKRRENFREEQKSQMASFAGRLGWRVKRSSKEEILRFCMEIGITRKMFVVWLNNNRPRESK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1345 168 SUPERFAMILY Homeodomain-like 100 168 IPR009057 -
Lele33g1345 168 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 108 163 IPR006455 -
Lele33g1345 168 Pfam ZF-HD protein dimerisation region 20 75 IPR006456 -
Lele33g1345 168 MobiDBLite consensus disorder prediction 90 119 - -
Lele33g1345 168 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 22 74 IPR006456 -
Lele33g1345 168 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 17 163 - -
Lele33g1345 168 Gene3D - 99 168 - -
Lele33g1345 168 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 22 74 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1345 Lele-ChrLele33 24094032 24094538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1345 22 163 ZF-HD Transcription Factor Family AT5G65410 32.955 8.72e-26 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele33g1345 ZF-HD_dimer 2.5e-19 No_clan