LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele33g1343	ATGCCTAAACTTTCGACTCTCTTGTTCTTCTCCTTCGTAGTCGTCATCGTCTTCGTCTCCATCTCACCTCTTTCCTATAATGAGGACACTTCCGATGTGAGGGTATCAATACTCAATTGGCAACTATACCGACACGTGGAGAAGCCGGGTTGGAGGCTAAGTTGGGCATGGAGAGGTGATGAGGTGATTTGGAGCATGACAGGAGCAGAGGCAACAGAGCAAGGGAACTGTTCAAGGTTTAAGGGACAAAACAAGCCACATTGTTGTGATAAGCAACCAACCATCATTGATCTTATGCCTGGCACTCCTTATAATAAGCAAGTTCCCAATTGTTGTAAACAAGGCATCCTATCATCTCTTCCTCAAGATCCCACCCAAATCACTTCCATGTTTCAGATGAATTATAATAAGCCCTCAATTCCAAACCCTAACAACATTACTGTGCCCGATAATTTCAGCCTTGGAATCCCCGGTTACTCCTGTAGTGAACCTACTCAGGTCCCTCCTAGCAAGTTTACTACTGATGGTCGTCGATGGACACAAGTTCTTGAAACATGGAATGTGACATGTATATACTCTCAATTCTTCTCATCATCAGCCCCAAAATGTTGTGTGTCATTGTCTGCTTTCTACAGTGACACCATTGTTCCTTGCCCTAAATGCAGCTGTAATTGCCAAGGCCTACCCGGAGCAAACTGTGTCAACTCTGTTAAAGCTCCTTCATTGTTGAAACTGCCACAAGATGATAGCACACAAGAGACAGAACCGGTGGTGAGGTGTTCACAGCACATGTGCCCTATTAGGATTCACTGGCATGTGAAGCAGAGTTATACAAAGTATTGGAGAGTGAAGGTCACAATAACAAATTATAACTTTGTGAAGAACTATTCTCAGTGGAATCTTGTCGTCTTACACCCTAACTTGCAGAGTTTAACACAAGTCTTCAGCTTCAACCACCAACCTCTTAGAATTTTTGGGGATATCAATGATACAGTGATGTTCTGGGGGATAAAGTACTACAATGACATGTTGCTGACACATGGGGAGAATGGGAATGTGCAAACAGAGATTTTACTTCACAAAGATGCTGGAATCTTCACCTTTAATGGAGGATGGGGTTTTCCCAGAACTGTTTTATTTAATGGAGATGATTGTGTTATGCCTAGTCCTGATAATTACCCTACCCTCCCCAATGATGCCTCTTTTCCCTCTTCTTCTTTCATGCTTTTCTTATCTTTTATCCTCTCAATATTGTTATTCATAGGGTTCTGA	1272	0.4253	MPKLSTLLFFSFVVVIVFVSISPLSYNEDTSDVRVSILNWQLYRHVEKPGWRLSWAWRGDEVIWSMTGAEATEQGNCSRFKGQNKPHCCDKQPTIIDLMPGTPYNKQVPNCCKQGILSSLPQDPTQITSMFQMNYNKPSIPNPNNITVPDNFSLGIPGYSCSEPTQVPPSKFTTDGRRWTQVLETWNVTCIYSQFFSSSAPKCCVSLSAFYSDTIVPCPKCSCNCQGLPGANCVNSVKAPSLLKLPQDDSTQETEPVVRCSQHMCPIRIHWHVKQSYTKYWRVKVTITNYNFVKNYSQWNLVVLHPNLQSLTQVFSFNHQPLRIFGDINDTVMFWGIKYYNDMLLTHGENGNVQTEILLHKDAGIFTFNGGWGFPRTVLFNGDDCVMPSPDNYPTLPNDASFPSSSFMLFLSFILSILLFIGF	423

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele33g1343	423	PANTHER	PROTEIN COBRA	25	414	IPR006918	GO:0010215\|GO:0016020
	Lele33g1343	423	PIRSF	COBRA	16	423	IPR006918	GO:0010215\|GO:0016020
	Lele33g1343	423	Pfam	COBRA-like protein	33	193	IPR006918	GO:0010215\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele33g1343	Lele-ChrLele33	24077986	24081936	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele33g1343	24	421	COBRA Gene Family	AT3G29810	52.357	1.56e-151	435