Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1332 ATGGAGAAGAAGGATTCAGAATCCAGCTTGAACCATCAGAATGATGAAGTAGACTTGGAAAAGCCTCATCTTGAAGAAGACTATGAGTCTCCAACTTTCAACCTTCAAAACGTTTCAAAAGTGATACTTCCTCCATTGGGAGCTTCAAGTTATAATGATCAGAACACAGCTCACTCCAAACGATGGATCATATCCCCAATGGATACAAGATACAGGTGTTGGGAGAGTTTGATGGTGGTGCTGGTAGGATACTCAGCATGGGTGTATCCCTTTGAGATAGGGTTTCTGATGTCTTCTCCAACACATAAACTCTACATTGTGGATAATGTCATTGATCTCTTCTTTGGCGTTGATATTGTTCTCACTTTCTTCCTTGCTTACATTGATCGTTCCACTCAACTTCTTGTTCCAGACTCCAAACAAATTGCCCTCAGGTACTTGTCAACATGGTTTGTGATGGATGTGGCATCAAGCATACCATATGAGGCATTGGGCTATTTGTTCACTGGCAAACGCAGGGTGGGTCTTACTTTCTTCCTCTTGGGCATACTTAGACTTTGGAGGCTTCGTAGAGTCAAGCAATACTTCACCAGGCTTGAGAAAGACATAAGATTAAGCTATTTTTGGATCAGATGTGTTAGACTTCTCTGTGTAACATTTTTTATAGCACACTGTGGTGGGTGTCTGTATTACCTACTAGCTGACGTGTATCCTGATTTAGGGAAGACATGGATTGGAACAATACATCCAAATTTCAAAGAGAAAAGCATTTGGATTAGATACATATCAGCCATGTATTGGTCTCTCACCACCATGACCACTGTTGGCTATGGTGACTTCCATGCTGTCAACCCCATGGAAATGGCCTTCACCATTTGTTATATGCTCTTCAATCTTGGCCTCACTGCTTACTTAATTGGCAACATGACCAATCTTGTTGTCAAAGGAACTTCTCGTACCATGGAATTTAGAAACAACATTGAAGCAGCATCATATTTTGTGAGCAGAAATAGAGTATCAGCGAGGCTAAAAGAGCAAATAATTGCTTATATGTGCTTAAGATACAAGGCAGAGAGTTTAAACCATCATCAGCTTATGGAACAACTTCCCAAATCAATACGCAAAACCATTTGTCAACACTTGTTCCTTCCAGCTGCTCAAAAAGTTTATCTTTTTAAAGGTGTCTCAAAAGACACCTTGTTGTCCTTGGCTGGAAAAATGAAGGCAGAGTATATACCACCCAAAGAAGAAGTTATCATGCAAGGTGAAGCAGCAGAGGATGTTTATGTAATAGCGTCTGGAGAAGTGGAGATCATTGATTGTGTAATGAACAAAGAGAAAGTTTCAGGGATTTTACAAAGATGGGACATGTTTGGAGAAGTTGGTGCACTTTGTTGTAAGCCTCACAGCTTCGCTTACAGAACCAAGACTCTCACACAGCTCTTGAGGCTCAAAACCAGTGATTTTACTGAGACAATGCAGACCAAAAAGGAAGACAACAGAAAAATCCTAGAAAATTTCCTTCAGCATTTGAAGAAGCTACACGATGTAAATGCTAGGGAATTGGTGATTGATTGGAGTAGAGAAGATGATCCGAATATGGCAGTGAACTTGTTACATGTGGCCTCAATTGGAAATGCTGCATTTCTTGAAGAGCTTTTGAAGGCTGGCTTGGATTCTAGTGTTGCAGACTCCAAAGGCAAAACCCCATTGCACATAGCAGCATTAAATGGCCACGAAGAGTGTGTAAAAGTGTTACTTAAGCATGCATGCAACGTACATGCAAGAGATATAAATGGCGACACTGCACTATGGGACGCCATAGCTTCAAAGCATTATTCAATATTCAGAGTCCTGTATCAGCTTTGTGCGCTCTCGGATCCACACACAGCAGGCGATCTTCTTTGTAAAGCAGCAAAGAGGAATGAGCTAACAGTGATGAGTGATCTTATAAAGCAAGGGTTGAACATAGAGTCCAAAGATCACCATGGTTTAACGCCAATGCAAGTTGCCTTGCAACAGAATCACGTGGACATGATTCAATTGCTTTTCATGAACGGCTCAGATGTTGTTGCTGCTCTTAATAACCATGAAGGAGAGCAACAGTACAACATTTGGGGAAGATATAATAATAATAATAGGCAAATCCCCTCAAGAGTTAGCATATTCAGAGGTCATCCTATACTGAGAAGACAACAAGGTTGCATTGAAGCTGGCAAGATGATAAGCTTCCCTAACTCAATTGAGGAGCTCAAGAGAATTGCAGGTGAAAGATTTGGGTTTGATGCAAAAGATGCAATGGTGACGGATGAAGGAGGAGCAGAAATAGATACTATTGATTTGATTAGAGATAATGATAAACTTTTTATTGTTGAATAG 2379 0.4061 MEKKDSESSLNHQNDEVDLEKPHLEEDYESPTFNLQNVSKVILPPLGASSYNDQNTAHSKRWIISPMDTRYRCWESLMVVLVGYSAWVYPFEIGFLMSSPTHKLYIVDNVIDLFFGVDIVLTFFLAYIDRSTQLLVPDSKQIALRYLSTWFVMDVASSIPYEALGYLFTGKRRVGLTFFLLGILRLWRLRRVKQYFTRLEKDIRLSYFWIRCVRLLCVTFFIAHCGGCLYYLLADVYPDLGKTWIGTIHPNFKEKSIWIRYISAMYWSLTTMTTVGYGDFHAVNPMEMAFTICYMLFNLGLTAYLIGNMTNLVVKGTSRTMEFRNNIEAASYFVSRNRVSARLKEQIIAYMCLRYKAESLNHHQLMEQLPKSIRKTICQHLFLPAAQKVYLFKGVSKDTLLSLAGKMKAEYIPPKEEVIMQGEAAEDVYVIASGEVEIIDCVMNKEKVSGILQRWDMFGEVGALCCKPHSFAYRTKTLTQLLRLKTSDFTETMQTKKEDNRKILENFLQHLKKLHDVNARELVIDWSREDDPNMAVNLLHVASIGNAAFLEELLKAGLDSSVADSKGKTPLHIAALNGHEECVKVLLKHACNVHARDINGDTALWDAIASKHYSIFRVLYQLCALSDPHTAGDLLCKAAKRNELTVMSDLIKQGLNIESKDHHGLTPMQVALQQNHVDMIQLLFMNGSDVVAALNNHEGEQQYNIWGRYNNNNRQIPSRVSIFRGHPILRRQQGCIEAGKMISFPNSIEELKRIAGERFGFDAKDAMVTDEGGAEIDTIDLIRDNDKLFIVE 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1332 792 Gene3D - 534 712 IPR036770 -
Lele33g1332 792 ProSiteProfiles Ankyrin repeat region circular profile. 566 597 - -
Lele33g1332 792 SMART ANK_2a 566 595 IPR002110 GO:0005515
Lele33g1332 792 SMART ANK_2a 599 630 IPR002110 GO:0005515
Lele33g1332 792 SMART ANK_2a 663 692 IPR002110 GO:0005515
Lele33g1332 792 SMART ANK_2a 534 562 IPR002110 GO:0005515
Lele33g1332 792 FunFam Potassium channel KAT3 73 315 - -
Lele33g1332 792 ProSiteProfiles Ankyrin repeat profile. 663 695 IPR002110 GO:0005515
Lele33g1332 792 SMART cnmp_10 391 508 IPR000595 -
Lele33g1332 792 Pfam Ankyrin repeats (3 copies) 539 620 IPR002110 GO:0005515
Lele33g1332 792 PRINTS Ankyrin repeat signature 679 693 IPR002110 GO:0005515
Lele33g1332 792 PRINTS Ankyrin repeat signature 567 582 IPR002110 GO:0005515
Lele33g1332 792 PRINTS EAG/ELK/ERG potassium channel family signature 119 128 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele33g1332 792 PRINTS EAG/ELK/ERG potassium channel family signature 261 278 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele33g1332 792 PRINTS EAG/ELK/ERG potassium channel family signature 108 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele33g1332 792 PRINTS EAG/ELK/ERG potassium channel family signature 305 314 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele33g1332 792 PRINTS EAG/ELK/ERG potassium channel family signature 287 298 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele33g1332 792 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 418 434 IPR018488 -
Lele33g1332 792 Gene3D Jelly Rolls 387 519 IPR014710 -
Lele33g1332 792 ProSiteProfiles Ankyrin repeat profile. 566 598 IPR002110 GO:0005515
Lele33g1332 792 FunFam Potassium channel KAT2 379 515 - -
Lele33g1332 792 SUPERFAMILY Ankyrin repeat 531 692 IPR036770 -
Lele33g1332 792 SUPERFAMILY cAMP-binding domain-like 318 511 IPR018490 -
Lele33g1332 792 ProSiteProfiles cAMP/cGMP binding motif profile. 391 510 IPR000595 -
Lele33g1332 792 Pfam KHA, dimerisation domain of potassium ion channel 719 790 IPR021789 -
Lele33g1332 792 Pfam Ion transport protein 72 320 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele33g1332 792 ProSiteProfiles KHA domain profile. 719 792 IPR021789 -
Lele33g1332 792 SUPERFAMILY Voltage-gated potassium channels 66 314 - -
Lele33g1332 792 Gene3D - 72 315 - -
Lele33g1332 792 MobiDBLite consensus disorder prediction 1 22 - -
Lele33g1332 792 Gene3D Helix hairpin bin 316 381 - -
Lele33g1332 792 PANTHER POTASSIUM CHANNEL AKT1 35 791 IPR045319 GO:0005249|GO:0006813
Lele33g1332 792 ProSiteProfiles Ankyrin repeat region circular profile. 663 690 - -
Lele33g1332 792 CDD CAP_ED 391 504 IPR000595 -
Lele33g1332 792 Pfam Cyclic nucleotide-binding domain 411 495 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1332 Lele-ChrLele33 23985382 23993534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1332 25 571 Ion Channels AT4G22200 65.880 0.0 755